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Protocol for proteogenomic dissection of intronic splicing enhancer interactome for prediction of individualized cancer prognosis

STAR Protocols(2021)10.1016/j.xpro.2021.100338Source: DataRank Database

Protocol for proteogenomic dissection of intronic splicing enhancer interactome for prediction of individualized cancer prognosis is a research paper published in STAR Protocols (2021). On theSindex it has a DataRank of 0. It has been cited 1 time.

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0DataRank · unranked

Scored on demand from live citation data

Open Access1 citations

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cellosaurus pxd doi

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (5 grants)Impact (FWCI 0.07)OA: goldTopics (59)IDs (PubMed, PMC, OpenAlex)Annotations (3)SDGs (3)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (4)

John A. Wrobel ORCID,Ling Xie ORCID,Xian Chen ORCID,Li Wang ORCID

Live enrichment

PubMed:33644773 PMC:PMC7887646 OpenAlex:https://openalex.org/W3126757318

NIGMS NIH HHS

Grant: R01 GM133107

NCI NIH HHS

Grant: U24 CA160035

National Institutes of Health

Grant: 5R01GM133107-02

Molecular mechanisms of CIB1 signaling

National Institutes of Health

Grant: 1U24CA160035-01

Cancer Proteome Center at Washington Univ, Univ of North Carolina & Boise State

National Institutes of Health

FWCI

0.07

Citation Percentile

0.4%

Citation Trend

2023

goldLicense: cc-by-nc-nd

journalhttps://www.sciencedirect.com/science/article/pii/S2666166721000459/pdf

GOLDhttps://www.sciencedirect.com/science/article/pii/S2666166721000459/pdf

publisherhttps://www.sciencedirect.com/science/article/pii/S2666166721000459/pdf

publisherhttps://api.elsevier.com/content/article/PII:S2666166721000459?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2666166721000459?httpAccept=text/plain

Fields of Study

RNA modifications and cancerAdvanced Proteomics Techniques and ApplicationsRNA Research and SplicingMedicineBiology0301 basic medicine0303 health sciences03 medical and health sciencesAlternative SplicingEnhancer Elements, GeneticHumansIntronsMCF-7 CellsNeoplasmsPredictive Value of TestsPrognosisProteogenomicsRNA, Neoplasm

MeSH Terms

ProteogenomicsEnhancer Elements, GeneticHumansIntronsNeoplasmsPredictive Value of TestsPrognosisRNA, NeoplasmAlternative SplicingMCF-7 Cells

Keywords

ProteogenomicsComputational biologyInteractomeRNA splicingCancerProteomicsAlternative splicingBioinformaticsBiologyMedicineTranscriptomeExonInternal medicineGeneGeneticsRNAGene expressionMass spectrometryGenomicsMolecular/chemical ProbesScience (General)PrognosisIntronsQ1-390Enhancer Elements, GeneticPredictive Value of TestsNeoplasmsProtocolMCF-7 CellsHumansRNA, Neoplasm

Sustainable Development Goals

SDG 3: 3. Good healthSDG 0: No povertySDG 0: Good health and well-being

Protocol for proteogenomic dissection of intronic splicing enhancer interactome for prediction of individualized cancer prognosis

FAIR Checklist

Authors (4)

Funding (5 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)