ProBiS-Database: Precalculated Binding Site Similarities and Local Pairwise Alignments of PDB Structures is a dataset published in Journal of Chemical Information and Modeling (2012). On theSindex it has a DataRank of 2.2, placing it in the top 9.7% of the data-sharing corpus. It has been cited 55 times, with 37 citing works in its 1-hop citation network. Its calibrated FAIR score is 48/100.
Ranks in the top 10% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
This score predates the current agent — it came from the earlier rubric, which blended repository metadata into the number and asked the model for a rating rather than an evidenced verdict. Re-evaluate the paper to score it against the current standards-anchored criteria, where every verdict is backed by a quote from the full text.
DOI present
datacite=0, pmcid=True, pmid=True
no OpenAlex id
The paper provides no description of machine-readable metadata (e.g., schema.org annotations, RDF, or structured metadata) to enhance findability beyond a plain web interface.
files/OA location present but not flagged OA
8 OA location(s)
Access is clearly described via a search text box, a widget, and a RESTful Web Service interface with HTTP commands and formats (JSON, XML, text/plain), but no explicit authentication or persistent identifier (other than PDB IDs) is mandated.
linked_datasets=0, datacite=0
accessions=0, trials=0
The database uses standard PDB identifiers and Pfam classifications, and the RESTful service supports JSON, XML, and text/plain formats, but no formal community-wide standard for metadata or vocabularies is explicitly adopted beyond these.
no license
downloads=0
no version chain
is_dataset
The paper describes weekly updates, free online availability, and an open access license (ACS AuthorChoice), but no explicit data availability statement, license for reuse, or repository link for data/code is provided, and reproducibility of the full database generation is not detailed enough for independent replication.
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.604
From this paper's citation signal
Citation Network Contribution
1.6
From 32 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 37 citers.
FWCI
2.67
Citation Percentile
0.9%
Citation Trend
Fields of Study
MeSH Terms
Keywords
Sustainable Development Goals