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Comprehensive analysis of the chromatin landscape in Drosophila melanogaster

Nature(2010)10.1038/nature09725Source: DataRank Database

Comprehensive analysis of the chromatin landscape in Drosophila melanogaster is a dataset published in Nature (2010). On theSindex it has a DataRank of 8.1, placing it in the top 2% of the data-sharing corpus. It has been cited 911 times, with 100 citing works in its 1-hop citation network.

Top 2%percentile

8.1DataRank

Ranks in the top 2% for downstream scientific impact

Data paper911 citations · 100 citing works in its network

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Linked data & code

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DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (19 grants)Impact (FWCI 29.25)OA: closedTopics (68)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (0/2)

Interoperable (0/2)

Reusable (1/3)

Dataset classification

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DataRank Breakdown

Base Score 13%Citation Network 87%

Base Score Contribution

1.0

From this paper's citation signal

Citation Network Contribution

7.1

From 100 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 100 citers.

FlyBase 101 - the basics of navigating FlyBase
Nucleic Acids Research2011377 citations9 referencesContributes 0.659
Unsupervised pattern discovery in human chromatin structure through genomic segmentation
Nature Methods2012662 citations30 referencesContributes 0.217
Multiplex chromatin interactions with single-molecule precision
Nature2019264 citations26 referencesContributes 0.215
The Functional Topography of the Arabidopsis Genome Is Organized in a Reduced Number of Linear Motifs of Chromatin States
The Plant Cell2014369 citations30 referencesContributes 0.197
Unsupervised pattern discovery in human chromatin structure through genomic segmentation
The Journal of the American Medical Association (JAMA) Network (American Medical Association)2012474 citations32 referencesContributes 0.193

Authors (33)

Sebastian Will ORCID,Yuri B. Schwartz ORCID,Aki Minoda ORCID,Nicole C. Riddle ORCID,Jason Ernst ORCID

Live enrichment

PubMed:21179089 PMC:PMC3109908 OpenAlex:https://openalex.org/W2037589637

NHGRI NIH HHS

Grant: U54 HG004592

NIGMS NIH HHS

Grant: R37 GM45744

NHGRI NIH HHS

Grant: U01 HG004258

NIGMS NIH HHS

Grant: R37 GM045744

NHGRI NIH HHS

Grant: RC1 HG005334

NHGRI NIH HHS

Grant: U01 HG004279

NIGMS NIH HHS

Grant: R01 GM071923

NIGMS NIH HHS

Grant: R01 GM082798

NHGRI NIH HHS

Grant: R01 HG004037

NHGRI NIH HHS

Grant: RC2 HG005639

National Institutes of Health

Grant: 1RC2HG005639-01

A Data Analysis Center for integration of fly and worm modENCODE datasets

National Institutes of Health

Grant: 5RC1HG005334-02

Integrative analysis of genomic and epigenomic datasets in multiple cell types

National Institutes of Health

Grant: 3U01HG004258-03S1

Genome-Wide Mapping of Chromosomal Proteins in Drosophilia

National Institutes of Health

Grant: 1U01HG004279-01

The Systematic Identification and Analysis of Replication Origins in Drosophila

National Institutes of Health

Grant: 3R37GM045744-19S1

Molecular Genetics of Dosage Compensation in Drosophila

National Institutes of Health

Grant: 5R01GM071923-03

Computational discovery of cis-regulatory sequences

National Institutes of Health

Grant: 5U54HG004592-02

A Comprehensive catalog of human DNasel hypersensitive sites

National Institutes of Health

Grant: 5R01GM082798-06

Integrative Analysis of Multiple Genomic Data Sets

National Science Foundation

Grant: 0905968

Postdoctoral Research Fellowships in Biology for FY 2009

FWCI

29.25

Citation Percentile

1.0%

Citation Trend

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closedLicense: Springer TDM

journalhttps://doi.org/10.1038/nature09725

repositoryhttps://pubmed.ncbi.nlm.nih.gov/21179089

repositoryhttps://openscholarship.wustl.edu/bio_facpubs/237

repositoryhttps://escholarship.org/uc/item/67v2j9dq

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/3109908

Fields of Study

Genomics and Chromatin DynamicsCRISPR and Genetic EngineeringChromosomal and Genetic Variations0301 basic medicine03 medical and health sciences0303 health sciences

MeSH Terms

AnimalsCell LineChromatinChromosomal Proteins, Non-HistoneDeoxyribonuclease IDrosophila melanogasterExonsGene Expression RegulationHistonesMaleRNATranscription, GeneticGenes, InsectSequence AnalysisOligonucleotide Array Sequence AnalysisDrosophila ProteinsChromatin ImmunoprecipitationGenome, InsectMolecular Sequence AnnotationPolycomb Repressive Complex 1

Keywords

ChromatinBiologyChIA-PETHistoneGeneticsGenomeDrosophila melanogasterComputational biologyGeneScaffold/matrix attachment regionChromatin remodelingMaleChromatin ImmunoprecipitationTranscription, GeneticGeneral Science & TechnologyChromosomal Proteins, Non-Histone1.1 Normal biological development and functioningGenome, InsectGenes, InsectCell LineHistonesGeneticUnderpinning researchAnimalsDeoxyribonuclease IDrosophila ProteinsOligonucleotide Array Sequence AnalysisPolycomb Repressive Complex 1PreventionHuman GenomeMolecular Sequence AnnotationNon-HistoneExonsChromosomal ProteinsGenesGene Expression RegulationRNAGeneric health relevanceInsectTranscriptionSequence AnalysisBiotechnology

Sustainable Development Goals

SDG 0: Life in Land