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Piece by piece: Building a ribozyme

Journal of Biological Chemistry(2020)10.1074/jbc.rev119.009929Source: DataRank Database

Piece by piece: Building a ribozyme is a research paper published in Journal of Biological Chemistry (2020). On theSindex it has a DataRank of 0.963. It has been cited 31 times, with 20 citing works in its 1-hop citation network.

N/A

0.963DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access31 citations · 20 citing works in its network

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Linked data & code

pdb

Data availability

Repositories this paper deposited data in (declared in PubMed).

PDB1FFK 3Q1R

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (6 grants)Impact (FWCI 1.94)OA: hybridTopics (26)IDs (PubMed, PMC, OpenAlex)Annotations (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 54%Citation Network 46%

Base Score Contribution

0.520

From this paper's citation signal

Citation Network Contribution

0.443

From 19 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 20 citers.

Template-Free Assembly of Functional RNAs by Loop-Closing Ligation
Journal of the American Chemical Society202225 citations47 referencesContributes 0.069
Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements
Nature Communications202227 citations53 referencesContributes 0.063
In vitroselections with RNAs of variable length converge on a robust catalytic core
Nucleic Acids Research20207 citations39 referencesContributes 0.053
How to build a ribosome from RNA fragments in Chlamydomonas mitochondria
Nature Communications202160 citations101 referencesContributes 0.041
Coevolution of RNA and protein subunits in RNase P and RNase MRP, two RNA processing enzymes
Journal of Biological Chemistry202419 citations88 referencesContributes 0.034

Authors (2)

Venkat Gopalan ORCID,Michael W. Gray ORCID

Live enrichment

PubMed:31953324 PMC:PMC7039547 OpenAlex:https://openalex.org/W2998761102

HHS | National Institutes of Health

Grant: GM-120582

HHS | National Institutes of Health

Grant: NS-096600

CIHR

Grant: MOP-11212

CIHR

Grant: MOP-4124

NIGMS NIH HHS

Grant: R01 GM120582

NINDS NIH HHS

Grant: R21 NS096600

FWCI

1.94

Citation Percentile

0.9%

Citation Trend

2018

2020

2021

2022

2023

2024

2026

hybridLicense: cc-by

journalhttp://www.jbc.org/article/S0021925817482688/pdf

publisherhttp://www.jbc.org/article/S0021925817482688/pdf

publisherhttps://api.elsevier.com/content/article/PII:S0021925817482688?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S0021925817482688?httpAccept=text/plain

publisherhttps://syndication.highwire.org/content/doi/10.1074/jbc.REV119.009929

Fields of Study

RNA and protein synthesis mechanismsRNA modifications and cancerGenomics and Phylogenetic StudiesEvolution, MolecularModels, MolecularRNA, CatalyticRNA, RibosomalRibonuclease P

MeSH Terms

Models, MolecularRNA, RibosomalRNA, CatalyticEvolution, MolecularRibonuclease P

Keywords

RibozymeComputer scienceEngineering drawingEngineeringBiologyGeneticsRNAEvolutionRibosomeRibonuclease P (RNase P)Enzyme CatalysisRibonucleoprotein ComplexRibozyme (Catalytic Rna) (Rna Enzyme)