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PathExt: a general framework for path-based mining of omics-integrated biological networks

Bioinformatics(2020)10.1093/bioinformatics/btaa941Source: DataRank Database

PathExt: a general framework for path-based mining of omics-integrated biological networks is a research paper published in Bioinformatics (2020). On theSindex it has a DataRank of 0. It has been cited 21 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access21 citations

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Linked data & code

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (5 grants)Impact (FWCI 1.30)OA: hybridTopics (25)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (4)

Vaidehi Pusadkar,Sridhar Hannenhalli ORCID,Nagasuma Chandra ORCID,Narmada Sambaturu ORCID

Live enrichment

PubMed:33305329 PMC:PMC8599850 OpenAlex:https://openalex.org/W3097279041

Indian Institute of Science (IISc) Partnership Program—Phase II

Grant: BT/PR27952/IN/22/212/2018

National Science Foundation

Grant: 1564785

Intramural Research Program of the National Cancer Institute, Center for Cancer Research

Department of Biotechnology

National Institutes of Health

FWCI

1.30

Citation Percentile

0.8%

Citation Trend

2021

2022

2023

2024

2025

hybridLicense: cc-by

journalhttps://academic.oup.com/bioinformatics/article-pdf/37/9/1254/41161692/btaa941.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/37/9/1254/41161692/btaa941.pdf

publisherhttp://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaa941/34841236/btaa941.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/37/9/1254/50359633/btaa941.pdf

journalhttps://doi.org/10.1093/bioinformatics/btaa941

Fields of Study

Bioinformatics and Genomic NetworksGene Regulatory Network AnalysisComputational Drug Discovery MethodsComputational BiologyHumansProteinsSoftwareTranscriptome

MeSH Terms

HumansProteinsSoftwareComputational BiologyTranscriptome

Keywords

Biological networkContext (archaeology)Computational biologyBiologyGene regulatory networkGeneBiological pathwayTranscriptomeSystems biologyComputer scienceGeneticsGene expression

Sustainable Development Goals

SDG 0: Good health and well-being

PathExt: a general framework for path-based mining of omics-integrated biological networks

FAIR Checklist

Authors (4)

Funding (5 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)