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DIMPL: a bioinformatics pipeline for the discovery of structured noncoding RNA motifs in bacteria

Bioinformatics(2021)10.1093/bioinformatics/btab624Source: DataRank Database

DIMPL: a bioinformatics pipeline for the discovery of structured noncoding RNA motifs in bacteria is a research paper published in Bioinformatics (2021). On theSindex it has a DataRank of 0. It has been cited 3 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access3 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (10 grants)Impact (FWCI 0.24)OA: hybridTopics (33)IDs (PubMed, PMC, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (4)

Glenn J Gaffield ORCID,Malavika Puri,Ronald R. Breaker ORCID,Kenneth I. Brewer ORCID

Live enrichment

PubMed:34524415 PMC:PMC8723152 OpenAlex:https://openalex.org/W3199201022

NIH HHS

Grant: GM022778

NIAID NIH HHS

Grant: R01 AI136794

NCRR NIH HHS

Grant: S10 RR029676

NIGMS NIH HHS

Grant: P01 GM022778

National Institutes of Health

Grant: AI136794

National Institutes of Health

Grant: 1R01GM136794-01A1

Global control of co-transcriptional splicing

National Institutes of Health

Grant: 1S10RR029676-01

High Performance Computing Instrumentation for Yale University Biomedical HPC Cen

National Institutes of Health

Grant: 5P01GM022778-30

PROGRAM IN MACROMOLECULAR STRUCTURE, MOTION, CONTROL

Howard Hughes Medical Institute

FWCI

0.24

Citation Percentile

0.5%

Citation Trend

2022

2023

hybridLicense: cc-by

journalhttps://academic.oup.com/bioinformatics/article-pdf/38/2/533/42039881/btab624.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/38/2/533/42039881/btab624.pdf

journalhttps://doi.org/10.1093/bioinformatics/btab624

repositoryhttps://pubmed.ncbi.nlm.nih.gov/34524415

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/8723152

Fields of Study

RNA and protein synthesis mechanismsBacterial Genetics and BiotechnologyRNA modifications and cancer0301 basic medicine0303 health sciences03 medical and health sciencesNucleotide MotifsBacteriaRiboswitchRNA, UntranslatedComputational Biology

MeSH Terms

BacteriaComputational BiologyRNA, UntranslatedRiboswitchNucleotide Motifs

Keywords

Pipeline (software)Computer scienceComputational biologyRiboswitchNon-coding RNAIntergenic regionIdentification (biology)RNABiologyGeneticsGeneGenomeProgramming languageRNA, UntranslatedBacteriaNucleotide MotifsApplications Notes