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Using graph neural networks for site-of-metabolism prediction and its applications to ranking promiscuous enzymatic products

Bioinformatics(2023)10.1093/bioinformatics/btad089Source: DataRank Database

Using graph neural networks for site-of-metabolism prediction and its applications to ranking promiscuous enzymatic products is a research paper published in Bioinformatics (2023). On theSindex it has a DataRank of 0. It has been cited 28 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access28 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (4 grants)OA: goldTopics (8)IDs (PubMed, PMC)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (3)

Liping Liu ORCID,Soha Hassoun ORCID,Vladimir Porokhin ORCID

Live enrichment

PubMed:36790067 PMC:PMC9991054

NSF

Grant: CCF-1909536

NIGMS NIH HHS

Grant: R01 GM132391

National Science Foundation

Grant: 1909536

FET: Small: Tools and Experimental Validation for Predicting Enzymatic Promiscuity and its Products

National Institutes of Health

Grant: 5R01GM132391-03

Computational Techniques for Advancing Untargeted Metabolomics Analysis

goldLicense: cc-by

publisherhttps://academic.oup.com/bioinformatics/article-pdf/39/3/btad089/49436629/btad089.pdf

publisherhttps://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad089/49196853/btad089.pdf

repositoryhttps://pmc.ncbi.nlm.nih.gov/articles/PMC9991054/pdf/btad089.pdf

Europe_PMChttps://europepmc.org/articles/PMC9991054

Europe_PMChttps://europepmc.org/articles/PMC9991054?pdf=render

Fields of Study

0206 medical engineering0202 electrical engineering, electronic engineering, information engineering02 engineering and technology

MeSH Terms

Cytochrome P-450 Enzyme SystemNeural Networks, Computer

Keywords

Original PaperCytochrome P-450 Enzyme SystemNeural Networks, Computer