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Transcriptome assembly at single-cell resolution with Beaver

Bioinformatics(2025)10.1093/bioinformatics/btaf236Source: DataRank Database

Transcriptome assembly at single-cell resolution with Beaver is a research paper published in Bioinformatics (2025). On theSindex it has a DataRank of 0. It has been cited 2 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access2 citations

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Linked data & code

arrayexpress

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (4 grants)Impact (FWCI 0.97)OA: goldTopics (32)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (3)

Qimin Zhang ORCID,Mingfu Shao ORCID,Qian Shi ORCID

Live enrichment

PubMed:40662838 PMC:PMC12261439 OpenAlex:https://openalex.org/W4412454266

National Science Foundation

Grant: DBI-2145171

National Institutes of Health

Grant: R01HG011065

National Science Foundation

Grant: 2145171

CAREER: Algorithms and Tools for Allele-Specific Transcript Assembly

National Institutes of Health

Grant: 1R01HG011065-01A1

Computational Methods for Assembling Multiple RNA-seq Samples

FWCI

0.97

Citation Percentile

0.8%

Citation Trend

2026

goldLicense: cc-by

journalhttps://academic.oup.com/bioinformatics/article-pdf/41/Supplement_1/i323/63745721/btaf236.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/41/Supplement_1/i323/63745721/btaf236.pdf

journalhttps://doi.org/10.1093/bioinformatics/btaf236

repositoryhttps://pubmed.ncbi.nlm.nih.gov/40662838

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/12261439

Fields of Study

Single-cell and spatial transcriptomicsCell Image Analysis TechniquesCRISPR and Genetic Engineering0206 medical engineering02 engineering and technology

MeSH Terms

AlgorithmsHumansSoftwareSequence Analysis, RNAGene Expression ProfilingSingle-Cell AnalysisTranscriptome

Keywords

BeaverLeverage (statistics)Computer scienceGraphScripting languageSample (material)Computational biologyBiologyArtificial intelligenceTheoretical computer scienceChemistryGenome Sequence AnalysisSequence Analysis, RNAGene Expression ProfilingHumansSingle-Cell AnalysisTranscriptomeArticleSoftwareAlgorithms

Sustainable Development Goals

SDG 0: Life in Land