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How to scan naked DNA using promiscuous recognition and no clamping: a model for pioneer transcription factors

Nucleic Acids Research(2024)10.1093/nar/gkae790Source: DataRank Database

How to scan naked DNA using promiscuous recognition and no clamping: a model for pioneer transcription factors is a research paper published in Nucleic Acids Research (2024). On theSindex it has a DataRank of 0. It has been cited 3 times.

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Open Access3 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (10 grants)Impact (FWCI 0.49)OA: goldTopics (45)IDs (PubMed, PMC, OpenAlex)Annotations (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (5)

Catherine Ghosh ORCID,Joshua Quintong,Mourad Sadqi ORCID,Víctor Muñoz ORCID,Rama Reddy Goluguri ORCID

Live enrichment

PubMed:39287129 PMC:PMC11472051 OpenAlex:https://openalex.org/W4402557848

National Institutes of Health

Grant: R01-GM152623

National Science Foundation

Grant: MCB-2112710

National Science Foundation

Grant: HRD-2112675

National Science Foundation

Grant: MCB-1616759

National Science Foundation

Grant: HRD-1547848

NIGMS NIH HHS

Grant: R01 GM152623

National Institutes of Health

Grant: 3R01GM152623-01S1

Mechanisms for DNA Recognition, Scanning and Nucleosome Mechanical Actions by Pioneer Transcription Factors and their Role in Cell Fate Decisions

National Science Foundation

Grant: 2112675

CREST Center for Cellular and Biomolecular Machines

National Science Foundation

Grant: 2112710

Dissecting the Rate Theory for Protein Folding Dynamics via Advanced Single-Molecule Fluorescence Experiments

W.M. Keck Foundation Biomedical Research Program

FWCI

0.49

Citation Percentile

0.6%

Citation Trend

2024

2025

goldLicense: cc-by-nc

journalhttps://academic.oup.com/nar/article-pdf/52/18/11098/59743946/gkae790.pdf

publisherhttps://academic.oup.com/nar/article-pdf/52/18/11098/59743946/gkae790.pdf

journalhttps://doi.org/10.1093/nar/gkae790

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39287129

repositoryhttps://escholarship.org/uc/item/2tr512zk

Fields of Study

Diffusion and Search DynamicsGenomics and Chromatin DynamicsRNA and protein synthesis mechanisms0301 basic medicine03 medical and health sciences

MeSH Terms

AnimalsBinding SitesDNADNA-Binding ProteinsNucleosomesProtein BindingTranscription FactorsHomeodomain Proteins

Keywords

Naked DNABiologyDNAChromatinNucleosomeDNA binding siteTranscription factorDNA sequencingCell biologyMolecular biologyComputational biologyBiophysicsGeneticsGenePromoterGene expressionHomeodomain ProteinsBinding SitesMolecular and Structural BiologyBioengineeringBiological SciencesNucleosomesEnvironmental sciencesDNA-Binding ProteinsChemical sciencesInformation and Computing SciencesAnimalsBiochemistry and Cell BiologyGeneric health relevanceDevelopmental BiologyTranscription FactorsProtein Binding