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Characterizing the targets of transcription regulators by aggregating ChIP-seq and perturbation expression data sets

Genome Research(2023)10.1101/gr.277273.122Source: DataRank Database

Characterizing the targets of transcription regulators by aggregating ChIP-seq and perturbation expression data sets is a research paper published in Genome Research (2023). On theSindex it has a DataRank of 0. It has been cited 5 times.

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0DataRank · unranked

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Open Access5 citations

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (7 grants)OA: bronzeTopics (32)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (5)

Eric Ching-Pan Chu ORCID,Aman Sharma ORCID,Alex Adrian-Hamazaki,Paul Pavlidis ORCID,Alexander M. Morin ORCID

Live enrichment

PubMed:37308292 PMC:PMC10317128 OpenAlex:https://openalex.org/W4380359899

National Institutes of Health

Grant: MH111099

Natural Sciences and Engineering Research Council of Canada

Grant: RGPIN-2016-05991

NIMH NIH HHS

Grant: R01 MH111099

Natural Sciences and Engineering Research Council of Canada

Grant: unidentified

unidentified

National Institutes of Health

Grant: 5R01MH111099-13

Neuroinformatics for gene expression: networks, function and meta-analysis

NSERC CREATE

IMH Marshall Scholars

bronzeLicense: cc-by-nc

journalhttps://genome.cshlp.org/content/33/5/763.full.pdf

publisherhttps://genome.cshlp.org/content/33/5/763.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/gr.277273.122

journalhttps://doi.org/10.1101/gr.277273.122

repositoryhttps://pubmed.ncbi.nlm.nih.gov/37308292

Fields of Study

Genomics and Chromatin DynamicsRNA Research and SplicingRNA and protein synthesis mechanisms0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

Chromatin Immunoprecipitation SequencingAnimalsHumansTranscription FactorsSequence Analysis, DNAGenomicsChromatin ImmunoprecipitationMice

Keywords

BiologyComputational biologyGenomicsGeneticsRNA-SeqGene expression profilingGeneGene expressionTranscriptomeGenomeMiceChromatin ImmunoprecipitationMethodsHumansAnimalsChromatin Immunoprecipitation SequencingSequence Analysis, DNATranscription Factors

Sustainable Development Goals

SDG 0: No poverty