🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Paul Pavlidis

University of British Columbia Hospital

ORCID: 0000-0002-0426-5028

Also affiliated with University of British Columbia, Canada's Michael Smith Genome Sciences Centre

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.3Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Canadian Open Neuroscience Platform—An open science framework for the neuroscience community

PLoS Computational Biology(2023)10.1371/journal.pcbi.1011230
Top 24%
0.844DataRank
Top 24%26 citations

Patrick Bermudez, Alexander Bernier, Michael J. S. Beauvais, Pierre Bellec, Sean Hill +10 more

Papers

Driven by 13 papers — median percentile 57. Top paper: “The Canadian Open Neuroscience Platform—An open science framework for the neuroscience community”.

The Canadian Open Neuroscience Platform—An open science framework for the neuroscience community

PLoS Computational Biology(2023)10.1371/journal.pcbi.1011230
Top 24%
0.844DataRank
Top 24%26 citations

Patrick Bermudez, Alexander Bernier, Michael J. S. Beauvais, Pierre Bellec, Sean Hill +10 more

Experiment level curation of transcriptional regulatory interactions in neurodevelopment

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009484
Top 43%
0.431DataRank
Top 43%8 citations

Alexander M. Morin, Tak Hou Calvin Chang, Tue Nguyen, Yi-Cheng Tsai, Aman Sharma +3 more

Experiment level curation identifies high confidence transcriptional regulatory interactions in neurodevelopment

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.11.439248
N/A
0DataRank · unranked
0 citations

Alexander M. Morin, Tak Hou Calvin Chang, Tue Nguyen, Yi-Cheng Tsai, Aman Sharma +3 more

In silico discovery of small molecules for efficient stem cell differentiation into definitive endoderm

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.06.463418
N/A
0DataRank · unranked
0 citations

Shugo Sasaki, Oriol Fornés, Meltem E. Omur, Helen Huang, Nathaniel C. Lim +6 more

ModelMatcher: A scientist‐centric online platform to facilitate collaborations between stakeholders of rare and undiagnosed disease research

Human Mutation(2022)10.1002/humu.24364
N/A
0DataRank · unranked
15 citations

Lucian Li, Sanja Rogić, Guillaume Poirier‐Morency, Seon-Young Kim, Undiagnosed Diseases Network +8 more

Characterizing the targets of transcription regulators by aggregating ChIP-seq and perturbation expression data sets

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.30.505909
N/A
0DataRank · unranked
1 citations

Eric Ching-Pan Chu, Aman Sharma, Alex Adrian-Hamazaki, Paul Pavlidis, Alexander M. Morin

In silico discovery of small molecules for efficient stem cell differentiation into definitive endoderm

Stem Cell Reports(2023)10.1016/j.stemcr.2023.01.008
N/A
0DataRank · unranked
21 citations

Shugo Sasaki, Oriol Fornés, Meltem E. Omur, Helen Huang, Carmen Bayly +8 more

Characterizing the targets of transcription regulators by aggregating ChIP-seq and perturbation expression data sets

Genome Research(2023)10.1101/gr.277273.122
N/A
0DataRank · unranked
5 citations

Eric Ching-Pan Chu, Aman Sharma, Alex Adrian-Hamazaki, Paul Pavlidis, Alexander M. Morin

Limits to the inference of gene regulation from bulk tissue expression data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.24.619521
N/A
0DataRank · unranked
3 citations

Alexander M. Morin, Paul Pavlidis, Eric Ching-Pan Chu

Identifying Reproducible Transcription Regulator Coexpression Patterns with Single Cell Transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.15.580581
Top 100%
0DataRank
Top 100%0 citations

Eric Ching-Pan Chu, Paul Pavlidis, Alexander M. Morin

Evaluation of connectivity map shows limited reproducibility in drug repositioning

Scientific Reports(2021)10.1038/s41598-021-97005-z
N/A
0DataRank · unranked
55 citations

Paul Pavlidis, Nathaniel C. Lim

Revealing function-altering MECP2 mutations in individuals with autism spectrum disorder using yeast and Drosophila

Genetics(2025)10.1093/genetics/iyaf121
N/A
0DataRank · unranked
3 citations

Jessica Schmitt, Graeme H. McIntosh, Barry P. Young, Tianshun Lian, Jie Liu +14 more

ModelMatcher: A scientist-centric online platform to facilitate collaborations between stakeholders of rare and undiagnosed disease research

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.30.462504
N/A
0DataRank · unranked
3 citations

Lucian Li, Sanja Rogić, Guillaume Poirier‐Morency, Seon-Young Kim, Undiagnosed Diseases Network +8 more