Genome sequence of Lactobacillus johnsonii XZ17, isolated from a C57BL/6J mouse lung is a dataset published in Microbiology Resource Announcements (2024). On theSindex it has a DataRank of 0.104, placing it in the top 77.8% of the data-sharing corpus. It has been cited 1 time. Its calibrated FAIR score is 50/100.
Ranks in the top 78% for downstream scientific impact
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“PRJNA1095000”
The paper provides a BioProject accession number, which is a persistent identifier scheme recognized by the rubric. [majority verdict 'yes' (3/5 passes agreed)]
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“GenBank”
The data are deposited in GenBank, a curated repository listed in re3data/FAIRsharing. [majority verdict 'yes' (3/5 passes agreed)]
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“All data are available under BioProject accession number PRJNA1095000 and BioSample accession number SAMN40710645.”— not found in the paper; verdict downgraded
The dataset identifiers appear only in the body text of the Data Availability section, not in the reference list. [downgraded to 'no' — no verifiable quote from the paper] [majority verdict 'no' (4/5 passes agreed)]
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“All data are available under BioProject accession number PRJNA1095000 and BioSample accession number SAMN40710645. The genome was deposited in GenBank (CP151183.1), and the nanopore base-called data were submitted to SRA (SRR28520834).”— not found in the paper; verdict downgraded
The data availability statement points to repository records with accessions, which is category 3 of Colavizza et al. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (4/5 passes agreed)]
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“The XZ17 genome is 1,948,140 bp and has a GC content of 34.64%.”
The dataset content is described in running prose with genome size and GC content, but no itemised inventory section or table is provided.
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“All data are available under BioProject accession number PRJNA1095000 and BioSample accession number SAMN40710645.”— not found in the paper; verdict downgraded
The data are stated to be available in public repositories with no precondition mentioned. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (4/5 passes agreed)]
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“All data are available under BioProject accession number PRJNA1095000 and BioSample accession number SAMN40710645.”— not found in the paper; verdict downgraded
The paper states that the data are available but does not use an explicit access-level label such as 'open access' or 'publicly available'. [downgraded to 'no' — no verifiable quote from the paper] [majority verdict 'no' (4/5 passes agreed)]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are not sensitive human-subject data, and no gatekeeper is named.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
“All data are available under BioProject accession number PRJNA1095000 and BioSample accession number SAMN40710645.”— not found in the paper; verdict downgraded
The paper states that the data are available now but does not specify how long they will persist. [downgraded to 'no' — no verifiable quote from the paper] [majority verdict 'no' (4/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format token (e.g., FASTA, FASTQ) is explicitly named in the paper for the released data.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No standard data/metadata vocabulary (e.g., MIGS) or FAIRsharing-registered checklist is explicitly named for the data. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“CP091981.1”
The paper references the GenBank accession CP091981.1 for a known 16S rRNA sequence used for homology comparison. [majority verdict 'yes' (3/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
No reuse license is explicitly stated for the data; the article's CC BY 4.0 license applies to the article, not the data.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
“CP151183.1”
The GenBank accession includes a version number (.1), identifying the specific snapshot of the genome. [majority verdict 'yes' (3/5 passes agreed)]
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
The paper does not mention any custom code or provide a locator for analysis code; only third-party tools are referenced.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“This work was supported in part by funding provided by NIH grants NHLBI R01HL153028 (X.Z.), NIAID R01AI138348 (G.B.H.), NHLBI R35HL144481 (B.B.M.)”
The paper provides specific award/grant numbers (e.g., R01HL153028) for each funder.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“Nanobind HMW DNA extraction kit (Circulomics) with RNase treatment was used for DNA isolation.”
The paper names specific instruments, kits, and software versions (e.g., Nanobind kit, MinION, Guppy v6.0.7, Flye v2.9) used to produce the data. [majority verdict 'yes' (4/5 passes agreed)]
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
The paper does not include a README, data dictionary, or table defining the data fields; only a prose description is given. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.104
From this paper's citation signal
Citation Network Contribution
0
Citation network not refreshed for this result
This paper's DataRank is currently driven only by its base citation score. Citation network data was not refreshed for this result.
Learn more about DataRank methodology →HHS | NIH | National Heart, Lung, and Blood Institute
Grant: 153028
HHS | NIH | National Institute of Allergy and Infectious Diseases
Grant: R01AI138348
HHS | NIH | National Heart, Lung, and Blood Institute
Grant: R35HL144481
National Institutes of Health
Grant: 5R01AI138348-02
Neonatal RSV infection and alteration of allergic immune responses
National Institutes of Health
Grant: 1R01HL153028-01A1
Microbiota Regulation of Pulmonary Complications Post-HCT
National Institutes of Health
Grant: 1R35HL144481-01
Immunobiology of Lung Injury and Fibrosis
NHLBI NIH HHS
Grant: R01 HL153028
FWCI
0.25
Citation Percentile
0.6%
Citation Trend
Fields of Study
Keywords
Sustainable Development Goals