Gary B. Huffnagle

Biochemistry, Genetics and Molecular BiologyMedicineHealth Professions

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile

0.104Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Genome sequence of Lactobacillus johnsonii XZ17, isolated from a C57BL/6J mouse lung

Microbiology Resource Announcements(2024)10.1128/mra.00555-24

Top 78%

0.104DataRank

Top 78%1 citations

Gina J. Oh, Bethany B. Moore, Gary B. Huffnagle, Xiaofeng Zhou, Keerthikka Ravi

Papers

Driven by 19 papers — median percentile 22. Top paper: “Profiling inflammatory outcomes of Candida albicans colonization and food allergy induction in the murine glandular stomach”.

Profiling inflammatory outcomes of Candida albicans colonization and food allergy induction in the murine glandular stomach

mBio(2024)10.1128/mbio.02113-24

N/A

0.269DataRank · unranked

5 citations

Nicole R. Falkowski, Kelsey Stark, Christopher A. Brown, Gary B. Huffnagle, Karen Zeise

Genome sequence of Lactobacillus johnsonii XZ17, isolated from a C57BL/6J mouse lung

Microbiology Resource Announcements(2024)10.1128/mra.00555-24

Top 78%

0.104DataRank

Top 78%1 citations

Gina J. Oh, Bethany B. Moore, Gary B. Huffnagle, Xiaofeng Zhou, Keerthikka Ravi

Interkingdom Communication and Regulation of Mucosal Immunity by the Microbiome

The Journal of Infectious Diseases(2020)10.1093/infdis/jiaa748

N/A

0DataRank · unranked

17 citations

Malak Bazzi, Nicholas W. Lukacs, Gary B. Huffnagle, Alexander D. Ethridge

Application of an ecology-based analytic approach to discriminate signal and noise in low-biomass microbiome studies: whole lung tissue is the preferred sampling method for amplicon-based characterization of murine lung microbiota

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.08.283259

N/A

0DataRank · unranked

0 citations

Kevin J. Hinkle, Roderick A. McDonald, Nicole R. Falkowski, Gary B. Huffnagle, Robert P. Dickson +1 more

Significance of the microbiome in obstructive lung disease

UNC Libraries(2020)10.17615/ay17-z315

N/A

0DataRank · unranked

0 citations

John R. Erb‐Downward, Gary B. Huffnagle, Vincent B. Young, Yvonne J. Huang, Jeffrey L. Curtis +10 more

Lung microbiota associations with clinical features of COPD in the SPIROMICS cohort

npj Biofilms and Microbiomes(2021)10.1038/s41522-021-00185-9

N/A

0DataRank · unranked

70 citations

Lesa Begley, John R. Erb‐Downward, Christine M. Freeman, Siddharth Madapoosi, Neil E. Alexis +27 more

Whole lung tissue is the preferred sampling method for amplicon-based characterization of murine lung microbiota

Microbiome(2021)10.1186/s40168-021-01055-4

N/A

0DataRank · unranked

60 citations

Kevin J. Hinkle, Roderick A. McDonald, Christopher A. Brown, Nicole R. Falkowski, Gary B. Huffnagle +2 more

Infant gut bacterial community composition and food‐related manifestation of atopy in early childhood

Pediatric Allergy and Immunology(2021)10.1111/pai.13704

N/A

0DataRank · unranked

28 citations

Alexandra R. Sitarik, Haejin Kim, Gary B. Huffnagle, Kei E. Fujimura, Germaine Yong +9 more

Thermoneutrality Alters Gastrointestinal Antigen Passage Patterning and Predisposes to Oral Antigen Sensitization in Mice

Frontiers in Immunology(2021)10.3389/fimmu.2021.636198

N/A

0DataRank · unranked

11 citations

Jee‐Boong Lee, Christopher A. Brown, Amnah Yamani, Sunil Tomar, Varsha Ganesan +5 more

Early-Life Lung and Gut Microbiota Development and Respiratory Syncytial Virus Infection

Frontiers in Immunology(2022)10.3389/fimmu.2022.877771

N/A

0DataRank · unranked

32 citations

Nobuhiro Asai, Gary B. Huffnagle, Nicholas W. Lukacs, Wendy Fonseca, Kazuma Yagi

Contribution of the Microbiome, Environment, and Genetics to Mucosal Type 2 Immunity and Anaphylaxis in a Murine Food Allergy Model

Frontiers in Allergy(2022)10.3389/falgy.2022.851993

N/A

0DataRank · unranked

18 citations

Nicole R. Falkowski, Christopher A. Brown, Roderick A. McDonald, Gary B. Huffnagle, Kelsey Stark

The Psychrotrophic Pseudomonas lundensis, a Non- aeruginosa Pseudomonad, Has a Type III Secretion System of the Ysc Family, Which Is Transcriptionally Active at 37°C

mBio(2022)10.1128/mbio.03869-21

N/A

0DataRank · unranked

10 citations

Nicole R. Falkowski, Brittan S. Scales, Volha Akulava, Л. Н. Валентович, Gary B. Huffnagle +1 more

A steroid‐resistant cockroach allergen model is associated with lung and cecal microbiome changes

Physiological Reports(2023)10.14814/phy2.15761

N/A

0DataRank · unranked

6 citations

Alexander D. Ethridge, Wendy Fonseca, Kazuma Yagi, Andrew J. Rasky, Susan B. Morris +5 more

Lactobacillus johnsonii and host communication: insight into modulatory mechanisms during health and disease

Frontiers in Microbiomes(2024)10.3389/frmbi.2023.1345330

N/A

0DataRank · unranked

20 citations

Keerthikka Ravi, Gary B. Huffnagle, Nicholas W. Lukacs, Wendy Fonseca, Llilian Arzola-Martínez

Gene expression profiling reveals host defense strategies for restricting Candida albicans invasion and gastritis to the limiting ridge of the murine stomach

Infection and Immunity(2024)10.1128/iai.00438-24

N/A

0DataRank · unranked

1 citations

Nicole R. Falkowski, Joseph D. Metcalf, Christopher A. Brown, Gary B. Huffnagle, Karen Zeise

Genomic and transcriptomic insights into vertebrate host-specific Lactobacillus johnsonii adaptation in the gastrointestinal tract

mSphere(2025)10.1128/msphere.00052-25

N/A

0DataRank · unranked

2 citations

Nicole R. Falkowski, Gary B. Huffnagle, Keerthikka Ravi

Lung and gut microbiota are altered by hyperoxia and contribute to oxygen-induced lung injury in mice

Science Translational Medicine(2020)10.1126/scitranslmed.aau9959

N/A

0DataRank · unranked

172 citations

Michael W. Sjoding, Antonia P. Popova, Tracy X. Cui, Matthew J. Hoostal, Thomas M. Schmidt +10 more

Alveolar metabolite availability facilitates secondary infection by Pseudomonas aeruginosa in acutely injured lungs

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2024.12.18.629020

N/A

0DataRank · unranked

0 citations

Thomas L. Flott, L. McLellan, Ingrid G. Bustos, J. Luis Guerrero, Lina Méndez +13 more

Lung Microbiota Predict Clinical Outcomes in Critically Ill Patients

American Journal of Respiratory and Critical Care Medicine(2020)10.1164/rccm.201907-1487oc

N/A

0DataRank · unranked

370 citations

Marcus J. Schultz, Tom van der Poll, Laura R. A. Schouten, Nicole R. Falkowski, J. Luth +6 more

Gary B. Huffnagle

Indexed papers

Top data-sharing exemplar

Papers