Complete Genome Sequence and Methylome of the Type Strain of Shewanella algae is a dataset published in Microbiology Resource Announcements (2021). On theSindex it has a DataRank of 0.531, placing it in the top 36.6% of the data-sharing corpus. It has been cited 9 times, with 8 citing works in its 1-hop citation network. Its calibrated FAIR score is 58/100.
Ranks in the top 37% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“The complete genome sequence of S. algae CECT 5071 T was deposited in DDBJ/ENA/GenBank under the accession no. CP068230 .”
The paper provides a GenBank accession (CP068230), which is a persistent identifier scheme.
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“The complete genome sequence of S. algae CECT 5071 T was deposited in DDBJ/ENA/GenBank under the accession no. CP068230 .”
The paper names DDBJ/ENA/GenBank, a recognised data repository, as the holder.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“The complete genome sequence of S. algae CECT 5071 T was deposited in DDBJ/ENA/GenBank under the accession no. CP068230 .”
The dataset identifiers appear only in the body text (data availability statement), not as a reference-list entry.
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“The complete genome sequence of S. algae CECT 5071 T was deposited in DDBJ/ENA/GenBank under the accession no. CP068230 . Sequencing raw data are available at the SRA under the accession no. SRR14739658 . The methylome of S. algae CECT 5071 T is available at the REBASE database under the organism accession no. 46337 .”
The statement points to repository records with accessions, fulfilling Colavizza category 3.
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“TABLE 1 Summary of methylation motifs detected in the complete genome sequence of S. algae CECT 5071 T and associated methyltransferases”
The paper includes a table (Table 1) that itemises the methylation motifs, serving as an itemised inventory of the methylome data. [majority verdict 'yes' (3/5 passes agreed)]
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“Sequencing raw data are available at the SRA under the accession no. SRR14739658 .”
The access route (SRA, GenBank, REBASE) is given with no stated precondition such as registration or embargo.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“Sequencing raw data are available at the SRA under the accession no. SRR14739658 .”
The paper describes where to download the data but does not label the access level with a standard term like 'open access' or 'freely available'.
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are not human-subject or sensitive, and no gatekeeper is named.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
The paper does not state how long the data will remain available or give any retention commitment. [majority verdict 'no' (4/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file-format token (e.g., FASTA, FASTQ) is named for the released data.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No data or metadata community standard (e.g., MIAME, MINSEQE, FAIRsharing-registered) is named for the data. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“ATCC 51192 (GenBank accession no. GCA_012396675.1 )”
The paper provides identifiers for other genome sequences used as references, which are external resources.
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
No licence is stated for the data; the CC-BY 4.0 licence applies only to the article.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
No version token or date is provided to identify a specific snapshot of the data; the accessions are static but not labelled as a version.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
No code locator is provided; the study used existing software and did not release custom code.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“Stiftelsen Lars Hiertas Minne (grant FO2019‐0293)”
The paper provides specific grant numbers for some funders, fulfilling the award number requirement.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“The DNA was isolated with the Genomic-tip 500/G kit (Qiagen).”
The paper names specific instruments, kits, and software (e.g., Genomic-tip 500/G kit, SMRTbell Express kit, Sequel SMRT cell, SMRT Link v8.0) used to produce the data.
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
“TABLE 1 Summary of methylation motifs detected in the complete genome sequence of S. algae CECT 5071 T and associated methyltransferases”
Variable-level definitions (methylation motifs) are provided inside the article in a table, but no documentation object is described as travelling with the data. [majority verdict 'partial' (4/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.345
From this paper's citation signal
Citation Network Contribution
0.185
From 4 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 8 citers.
Stiftelsen Lars Hiertas Minne
Grant: FO2019-0293
Stiftelsen Längmanska Kulturfonden
Grant: BA20-0736
Karolinska Institutet
Grant: 2020-01556
Stiftelsen Anna och Gunnar Vidfelts Fond för Biologisk Forskning
Grant: 2019-051-Vidfelts fond/SOJOH
HHS | National Institutes of Health
Grant: Intramural Research Program of the National Library of Medicine
Karolinska Institute
Grant: unidentified
unidentified
Hans Dahlbergs Stiftelse för Miljö och Hälsa
Hans Dahlbergs Stiftelse för Miljö och Hälsa (Hans Dahlberg Foundation for Environment and Health)
FWCI
0.45
Citation Percentile
0.6%
Citation Trend
Fields of Study
Keywords
Sustainable Development Goals