🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Michael Y. Galperin

United States National Library of Medicine

ORCID: 0000-0002-2265-5572
Biochemistry, Genetics and Molecular BiologyEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
9.7Author DataRank

Indexed papers

5in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

COG database update: focus on microbial diversity, model organisms, and widespread pathogens

Nucleic Acids Research(2020)10.1093/nar/gkaa1018
Top 3%
5.9DataRank
Top 3%1021 citations

Yuri I. Wolf, Kira S. Makarova, Roberto Vera Alvarez, David Landsman, Eugene V. Koonin +1 more

Papers

Driven by 23 papers — median percentile 83. Top paper: “COG database update: focus on microbial diversity, model organisms, and widespread pathogens”.

COG database update: focus on microbial diversity, model organisms, and widespread pathogens

Nucleic Acids Research(2020)10.1093/nar/gkaa1018
Top 3%
5.9DataRank
Top 3%1021 citations

Yuri I. Wolf, Kira S. Makarova, Roberto Vera Alvarez, David Landsman, Eugene V. Koonin +1 more

Towards BioDBcore: a community-defined information specification for biological databases

Nucleic Acids Research(2010)10.1093/nar/gkq1173
N/A
3.1DataRank · unranked
40 citations

Amos Bairoch, Dawn Field, Chris Taylor, Teresa K. Attwood, Alex Bateman +34 more

Evolution of cytochrome bc complexes: From membrane-anchored dehydrogenases of ancient bacteria to triggers of apoptosis in vertebrates

Biochimica et Biophysica Acta (BBA) - Bioenergetics(2013)10.1016/j.bbabio.2013.07.006
N/A
2.8DataRank · unranked
78 citations

Dmitry A. Cherepanov, Michael Y. Galperin, Vladimir P. Skulachev, Armen Y. Mulkidjanian, Daria V. Dibrova

COG database update 2024

Nucleic Acids Research(2024)10.1093/nar/gkae983
Top 13%
1.5DataRank
Top 13%128 citations

Roberto Vera Alvarez, Svetlana Karamycheva, Kira S. Makarova, Yuri I. Wolf, David Landsman +2 more

Nonessential Ribosomal Proteins in Bacteria and Archaea Identified Using Clusters of Orthologous Genes

Journal of Bacteriology(2021)10.1128/jb.00058-21
Top 17%
1.2DataRank
Top 17%44 citations

Yuri I. Wolf, Sofya K. Garushyants, Roberto Vera Alvarez, Eugene V. Koonin, Michael Y. Galperin

Complete Genome Sequences of the Human Pathogen Paenibacillus thiaminolyticus Mbale and Type Strain P. thiaminolyticus NRRL B-4156

Microbiology Resource Announcements(2020)10.1128/mra.00181-20
Top 32%
0.612DataRank
Top 32%11 citations

Lijun Zhang, Joseph N. Paulson, Mathieu Almeida, Benjamin von Bredow, Dona Saumya S. Wijetunge +5 more

Complete Genome Sequence and Methylome of the Type Strain of Shewanella algae

Microbiology Resource Announcements(2021)10.1128/mra.00559-21
Top 37%
0.531DataRank
Top 37%9 citations

Kaisa Thorell, Michael Y. Galperin, Tino Krell, Ute Römling, Åsa Sjöling +2 more

Sequence conservation, domain architectures, and phylogenetic distribution of the HD-GYP type c-di-GMP phosphodiesterases

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.05.467447
N/A
0DataRank · unranked
2 citations

Shan‐Ho Chou, Michael Y. Galperin

Non-essential ribosomal proteins in bacteria and archaea identified using COGs

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.31.429008
N/A
0DataRank · unranked
0 citations

Yuri I. Wolf, Sofya K. Garushyants, Roberto Vera Alvarez, Eugene V. Koonin, Michael Y. Galperin

Clp protease and antisense RNA jointly regulate the global regulator CarD to mediate mycobacterial starvation response

eLife(2022)10.7554/elife.73347
N/A
0DataRank · unranked
20 citations

Fang Chen, Xiaoyu Liu, Jinfeng Xiao, Binda T Andongma, Qing Tang +5 more

Conservation and evolution of the sporulation gene set in diverse members of the Firmicutes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.25.481979
N/A
0DataRank · unranked
5 citations

Natalya Yutin, Yuri I. Wolf, Roberto Vera Alvarez, Eugene V. Koonin, Michael Y. Galperin

Type IV pili is a critical virulence factor in clinical isolates of Paenibacillus thiaminolyticus

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.24.477451
N/A
0DataRank · unranked
0 citations

Aiqin Shi, Paddy Ssentongo, Lijun Zhang, Albert M. Isaacs, Sarah U. Morton +11 more

Gas and light: triggers of c-di-GMP-mediated regulation

FEMS Microbiology Reviews(2023)10.1093/femsre/fuad034
N/A
0DataRank · unranked
37 citations

Wei Zhang, He Yang, Shan‐Ho Chou, Michael Y. Galperin, Jin He +1 more

All DACs in a Row: Domain Architectures of Bacterial and Archaeal Diadenylate Cyclases

Journal of Bacteriology(2023)10.1128/jb.00023-23
N/A
0DataRank · unranked
31 citations

Michael Y. Galperin

ComFB, a new widespread family of c-di-NMP receptor proteins

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.10.622515
N/A
0DataRank · unranked
5 citations

Abdalla A. Elshereef, Vikram Alva, Jeanette Hahn, David Dubnau, Michael Y. Galperin +2 more

ComFB, a widespread family of c-di-NMP receptor proteins

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2513041122
N/A
0DataRank · unranked
3 citations

Abdalla A. Elshereef, Vikram Alva, Jeanette Hahn, Frederik Eck, Louisa Celma +6 more

Using bioinformatics for identifying and plugging metabolic pathway holes

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2518071122
N/A
0DataRank · unranked
1 citations

Michael Y. Galperin

Breast mass segmentation in ultrasound with selective kernel U-Net convolutional neural network

Biomedical Signal Processing and Control(2020)10.1016/j.bspc.2020.102027
N/A
0DataRank · unranked
317 citations

Piotr Jarosik, Aleksandra Szubert, Michael Y. Galperin, Haydee Ojeda‐Fournier, Linda K. Olson +4 more

A decade of research on the second messenger c-di-AMP

FEMS Microbiology Reviews(2020)10.1093/femsre/fuaa019
N/A
0DataRank · unranked
118 citations

Xia Cai, Hongdan Ma, Li Zhu, Yuling Zhang, Shan‐Ho Chou +3 more

Ways to control harmful biofilms: prevention, inhibition, and eradication

Critical Reviews in Microbiology(2020)10.1080/1040841x.2020.1842325
N/A
0DataRank · unranked
113 citations

Siyang Xu, Yiting Wang, Yuling Zhang, Shan‐Ho Chou, Michael Y. Galperin +2 more

Cyclic di-AMP, a second messenger of primary importance: tertiary structures and binding mechanisms

Nucleic Acids Research(2020)10.1093/nar/gkaa112
N/A
0DataRank · unranked
102 citations

Wen Yin, Michael Y. Galperin, Shan‐Ho Chou, Jin He

Paenibacillus infection with frequent viral coinfection contributes to postinfectious hydrocephalus in Ugandan infants

Science Translational Medicine(2020)10.1126/scitranslmed.aba0565
N/A
0DataRank · unranked
55 citations

Brent L. Williams, Christine Hehnly, Nischay Mishra, Shamim A. Sinnar, Lijun Zhang +47 more

Clp protease and antisense RNA jointly regulate the global regulator CarD to mediate mycobacterial starvation response

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.15.439805
N/A
0DataRank · unranked
6 citations

Fang Chen, Xiaoyu Liu, Jinfeng Xiao, Binda T. Andongma, Qing Tang +5 more