Draft Genome Sequence of the Bacterium Delftia acidovorans Strain D4B, Isolated from Soil is a dataset published in Microbiology Resource Announcements (2021). On theSindex it has a DataRank of 0.396, placing it in the top 46.2% of the data-sharing corpus. It has been cited 8 times, with 4 citing works in its 1-hop citation network. Its calibrated FAIR score is 63/100.
Ranks in the top 46% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“JAHLGQ000000000”
The paper provides a GenBank accession number, which is a persistent identifier scheme for genomic data.
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“DDBJ/ENA/GenBank”
The paper explicitly names GenBank, a major public repository for genomic sequences.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“Data availability. This whole-genome shotgun project has been deposited in DDBJ/ENA/GenBank under the accession number JAHLGQ000000000 .”
The dataset identifier appears only in the body text, not as a reference-list entry.
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“Data availability. This whole-genome shotgun project has been deposited in DDBJ/ENA/GenBank under the accession number JAHLGQ000000000 . The version described in this paper is version JAHLGQ000000000.2 . The raw reads have been deposited in the Sequence Read Archive (SRA) database under SRA accession number SRP323477 and BioProject accession number PRJNA736486 .”
The data availability statement points to repository records with accessions, fulfilling the category 3.
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“The genome size is 6.26 Mbp, with a G+C content of 67%. The genome encodes enzymes potentially involved in the degradation of fluorinated compounds.”
The dataset's content and size are described in running prose, not in an itemised inventory.
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“This whole-genome shotgun project has been deposited in DDBJ/ENA/GenBank under the accession number JAHLGQ000000000 .”
The data are deposited in public repositories without any stated precondition.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“This whole-genome shotgun project has been deposited in DDBJ/ENA/GenBank under the accession number JAHLGQ000000000 .”
The paper describes the deposit action but does not apply an explicit access-level label to the data. [majority verdict 'partial' (4/5 passes agreed)]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are not sensitive, and no gatekeeper is named.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
“This whole-genome shotgun project has been deposited in DDBJ/ENA/GenBank under the accession number JAHLGQ000000000 . The version described in this paper is version JAHLGQ000000000.2 . The raw reads have been deposited in the Sequence Read Archive (SRA) database under SRA accession number SRP323477 and BioProject accession number PRJNA736486 .”
The paper states that the data 'have been deposited', implying current availability, but provides no statement about how long the data will persist. [majority verdict 'partial' (3/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format token is named in the paper for the released data.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No community data or metadata standard is named in the paper.
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“BLASTP searches with two Delftia acidovorans haloacid dehalogenases from the NCBI database (GenBank accession numbers WP_011137954.1 and PZP66635.1).”— not found in the paper; verdict downgraded
The paper provides GenBank accession numbers for external resources used in the analysis. [downgraded to 'no' — no verifiable quote from the paper] [majority verdict 'no' (3/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
No reuse license is named for the data in the paper.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
“The version described in this paper is version JAHLGQ000000000.2”
A version token is explicitly given for the genome assembly.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
No code availability statement is provided; only third-party tools are named.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“grant NIH U54 HD 090216”
Specific grant numbers are provided for funding. [majority verdict 'yes' (4/5 passes agreed)]
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“Genomic DNA was extracted from the harvested cell pellet using the Qiagen DNeasy UltraClean microbial silica spin column kit.”
The paper names specific instruments, kits, and software versions used to produce the data.
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
No documentation object (README, codebook) is named in the paper.
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.330
From this paper's citation signal
Citation Network Contribution
0.0659
From 3 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 4 citers.
NIH HHS
Grant: S10 OD021743
NIGMS NIH HHS
Grant: P30 GM122731
NICHD NIH HHS
Grant: U54 HD090216
NCATS NIH HHS
Grant: UL1 TR002366
National Institutes of Health
Grant: 1S10OD021743-01A1
High Throughput Sequencing System for KUMC Genomics Core
National Institutes of Health
Grant: 1P30GM122731-01
Molecular Regulation of Cell Development and Differentiation Phase III COBRE
National Institutes of Health
Grant: 5UL1TR002366-04
Frontiers: University of Kansas Clinical and Translational Science Institute
DOD | USAF | AMC | Air Force Research Laboratory
OUSD(R&E) ARAP Program
DOD | Defense Health Agency
DOD | Defense Health Agency (DHA)
OUSD(R&E) ARAP Program
DOD | USAF | AMC | Air Force Research Laboratory (AFRL)
FWCI
0.55
Citation Percentile
0.6%
Citation Trend
Fields of Study
Keywords
Sustainable Development Goals