Pilot corpus: NIH-funded biomedical datasets. Any DOI can be scored on demand — network effects sharpen as coverage grows.

SARS-CoV-2 infection mediates differential expression of human endogenous retroviruses and long interspersed nuclear elements

JCI Insight(2021)10.1172/jci.insight.147170Source: DataRank Database

SARS-CoV-2 infection mediates differential expression of human endogenous retroviruses and long interspersed nuclear elements is a research paper published in JCI Insight (2021). On theSindex it has a DataRank of 0.612. It has been cited 58 times.

N/A

0.612DataRank · unranked

Scored on demand from live citation data

Open Access58 citations

Download PDF

Cite:

Linked data & code

geo gen doi

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (6 grants)Impact (FWCI 8.11)OA: goldTopics (76)Linked Datasets (14)DataCite Reuse (14)IDs (PubMed, PMC, OpenAlex)Annotations (3)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (1/2)

Open Access

Interoperable (2/2)

DataCite relations
Linked datasets

Reusable (0/3)

FAIR checklist signals are shown for context only and do not affect DataRank scoring.

Run a calibrated FAIR evaluation for this paper →

We only score data papers we can read in full — never from an abstract alone.

DataRank Breakdown

Base Score 100%Citation Network 0%

Base Score Contribution

0.612

From this paper's citation signal

Citation Network Contribution

Citation network not refreshed for this result

This paper's DataRank is currently driven only by its base citation score. Citation network data was not refreshed for this result.

Learn more about DataRank methodology →

Authors (8)

Matthew Greenig ORCID,Manvendra Singh ORCID,Matthew L. Bendall ORCID,Rodrigo R. R. Duarte ORCID,Cédric Feschotte ORCID

Live enrichment

PubMed:34731091 PMC:PMC8783694 OpenAlex:https://openalex.org/W3208707496

National Institutes of Health

Grant: T32GM007739

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior

Grant: BEX1279/13-0

National Institutes of Health

Grant: U01HG009391

National Institutes of Health

Grant: R35GM122550

Cornell University

Grant: Cornell Presidential Postdoctoral Fellowship

Cornell University

Grant: Cornell Office of Academic Integration

FWCI

8.11

Citation Percentile

1.0%

Citation Trend

2021

2022

2023

2024

2025

2026

goldLicense: cc-by

journalhttp://insight.jci.org/articles/view/147170/files/pdf

publisherhttp://insight.jci.org/articles/view/147170/files/pdf

publisherhttps://insight.jci.org/articles/view/147170/files/pdf

journalhttps://doi.org/10.1172/jci.insight.147170

repositoryhttps://pubmed.ncbi.nlm.nih.gov/34731091

Fields of Study

Cytomegalovirus and herpesvirus researchViral Infections and Immunology ResearchChromosomal and Genetic VariationsA549 CellsCOVID-19Cell LineChromatin Immunoprecipitation SequencingComputational BiologyCoronavirus InfectionsDNA Transposable ElementsDown-RegulationEndogenous RetrovirusesHost Microbial InteractionsHumansIn Vitro TechniquesInfluenza A virusInfluenza, HumanLong Interspersed Nucleotide ElementsMiddle East Respiratory Syndrome CoronavirusParainfluenza Virus 3, HumanRNA-SeqRespiratory Syncytial Virus InfectionsRespiratory Syncytial VirusesRespirovirus InfectionsRetroelementsSevere acute respiratory syndrome-related coronavirusSARS-CoV-2Severe Acute Respiratory SyndromeTranscriptomeUp-Regulation

MeSH Terms

A549 CellsHost Microbial InteractionsChromatin Immunoprecipitation SequencingRNA-SeqCOVID-19SARS-CoV-2Cell LineDNA Transposable ElementsHumansInfluenza, HumanInfluenza A virusParainfluenza Virus 3, HumanRespirovirus InfectionsRespiratory Syncytial VirusesDown-RegulationUp-RegulationCoronavirus InfectionsRespiratory Syncytial Virus InfectionsRetroelementsComputational BiologyEndogenous RetrovirusesLong Interspersed Nucleotide ElementsSevere Acute Respiratory SyndromeSevere acute respiratory syndrome-related coronavirusTranscriptomeMiddle East Respiratory Syndrome CoronavirusIn Vitro Techniques

Keywords

BiologyVirologyVirusDownregulation and upregulationMiddle East respiratory syndrome coronavirusEndogenous retrovirusImmune systemGene expressionTranscriptomeCoronavirusInnate immune systemGeneImmunologyGeneticsMedicineCoronavirus disease 2019 (COVID-19)Infectious diseaseinnate immunityCovid-19

Additional file 7 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614651.v1figshare

Additional file 7 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614651figshare

Additional file 5 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614645figshare

Additional file 4 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614642.v1figshare

Additional file 3 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614639figshare

Additional file 6 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614648.v1figshare

Additional file 3 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614639.v1figshare

Additional file 2 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614636figshare

Additional file 1 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614633.v1figshare

Additional file 5 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614645.v1figshare

Additional file 1 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614633figshare

Additional file 6 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614648figshare

Additional file 2 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614636.v1figshare

Additional file 4 of SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses

10.6084/m9.figshare.26614642figshare

Related Papers (10)

Large-Scale Multi-omic Analysis of COVID-19 Severity

N/A

0.973DataRank · unranked

Cell Systems(2020)

co-cited

10.1016/j.cels.2020.10.003

Multi-Omics Resolves a Sharp Disease-State Shift between Mild and Moderate COVID-19

N/A

9.7DataRank · unranked

Cell(2020)

co-cited

10.1016/j.cell.2020.10.037

Lung transplantation for patients with severe COVID-19

N/A

0.873DataRank · unranked

Science Translational Medicine(2020)

co-cited

10.1126/scitranslmed.abe4282

A network medicine approach to investigation and population-based validation of disease manifestations and drug repurposing for COVID-19

N/A

0.785DataRank · unranked

PLoS Biology(2020)

co-cited

10.1371/journal.pbio.3000970

CCR5 inhibition in critical COVID-19 patients decreases inflammatory cytokines, increases CD8 T-cells, and decreases SARS-CoV2 RNA in plasma by day 14

International Journal of Infectious Diseases(2020)

co-cited

10.1016/j.ijid.2020.10.101

A linear prognostic score based on the ratio of interleukin-6 to interleukin-10 predicts outcomes in COVID-19

N/A

0.704DataRank · unranked

EBioMedicine(2020)

co-cited

10.1016/j.ebiom.2020.103026

Impact of Comorbidities on SARS-CoV-2 Viral Entry-Related Genes

Journal of Personalized Medicine(2020)

co-cited

10.3390/jpm10040146

Clinical Characteristics and Outcomes of Coronavirus Disease 2019 Patients Who Received Compassionate-Use Leronlimab

N/A

1.6DataRank · unranked

Clinical Infectious Diseases(2020)

co-cited

10.1093/cid/ciaa1583

Longitudinal proteomic analysis of severe COVID-19 reveals survival-associated signatures, tissue-specific cell death, and cell-cell interactions

N/A

7.8DataRank · unranked

Cell Reports Medicine(2021)

co-cited

10.1016/j.xcrm.2021.100287

Severely ill patients with COVID-19 display impaired exhaustion features in SARS-CoV-2–reactive CD8 + T cells

Science Immunology(2021)

co-cited

10.1126/sciimmunol.abe4782

SARS-CoV-2 infection mediates differential expression of human endogenous retroviruses and long interspersed nuclear elements

FAIR Checklist

DataRank Breakdown

Authors (8)

Funding (6 grants)

Impact

Open Access

Topics

Linked Datasets (14)

Annotations (Europe PMC)

Related Papers (10)