Cédric Feschotte

Agricultural and Biological SciencesPhysics and AstronomyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Regulatory transposable elements in the encyclopedia of DNA elements

Nature Communications(2024)10.1038/s41467-024-51921-6

Top 20%

1.0DataRank

Top 20%54 citations

Jason D. Chobirko, Xiaoyu Zhuo, Cédric Feschotte, Ting Wang, Alan Y. Du

Papers

Driven by 35 papers — median percentile 80. Top paper: “Mosaic cis-regulatory evolution drives transcriptional partitioning of HERVH endogenous retrovirus in the human embryo”.

Mosaic cis-regulatory evolution drives transcriptional partitioning of HERVH endogenous retrovirus in the human embryo

eLife(2022)10.7554/elife.76257

N/A

1.5DataRank · unranked

56 citations

Manvendra Singh, Gabrijela Dumbović, Jason D. Chobirko, John L. Rinn, Cédric Feschotte +1 more

Regulatory transposable elements in the encyclopedia of DNA elements

Nature Communications(2024)10.1038/s41467-024-51921-6

Top 20%

1.0DataRank

Top 20%54 citations

Jason D. Chobirko, Xiaoyu Zhuo, Cédric Feschotte, Ting Wang, Alan Y. Du

A Field Guide to Eukaryotic Transposable Elements

Annual Review of Genetics(2020)10.1146/annurev-genet-040620-022145

N/A

0.973DataRank · unranked

655 citations

Cédric Feschotte, Jonathan N. Wells

TypeTE: a tool to genotype mobile element insertions from whole genome resequencing data

Nucleic Acids Research(2020)10.1093/nar/gkaa074

N/A

0DataRank · unranked

17 citations

Jainy Thomas, Lindsay M. Payer, Jeffrey M. Kidd, Julie Feusier, W. Scott Watkins +4 more

A single-cell RNA expression map of human coronavirus entry factors

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.08.084806

N/A

0DataRank · unranked

35 citations

Vikas Bansal, Cédric Feschotte, Manvendra Singh

Human Endogenous Retrovirus K Rec forms a regulatory loop with MITF that opposes the progression of melanoma to an invasive stage

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.27.120170

N/A

0DataRank · unranked

11 citations

Huiqiang Cai, Mario Bunse, Cédric Feschotte, Zsuzsanna Izsvák, Manvendra Singh

Evolution and antiviral activity of a human protein of retroviral origin

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.23.263665

N/A

0DataRank · unranked

11 citations

Manvendra Singh, Harrison B. Cullen, Raphael A. Kirou, Meriem Benkaddour-Boumzaouad, José Luis Cortés +4 more

Evolution of mouse circadian enhancers from transposable elements

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.09.375469

N/A

0DataRank · unranked

2 citations

Hayley Sanderson, Cédric Feschotte, Julius Judd

Ancient Transposable Elements Transformed the Uterine Regulatory Landscape and Transcriptome during the Evolution of Mammalian Pregnancy

UNC Libraries(2020)10.17615/p0hq-n256

N/A

0DataRank · unranked

0 citations

Erik C. Mazur, Frank Grützner, Jason D. Lieb, Cédric Feschotte, Deena Emera +11 more

Recurrent evolution of vertebrate transcription factors by transposase capture

Science(2021)10.1126/science.abc6405

N/A

0DataRank · unranked

169 citations

Julius Judd, Ruiling Zhang, Alan Zhong, Nathaniel Garry, Ellen J. Pritham +2 more

SARS-CoV-2 infection mediates differential expression of human endogenous retroviruses and long interspersed nuclear elements

JCI Insight(2021)10.1172/jci.insight.147170

N/A

0DataRank · unranked

58 citations

Matthew Greenig, Manvendra Singh, Matthew L. Bendall, Rodrigo R. R. Duarte, Cédric Feschotte +3 more

Evolution of mouse circadian enhancers from transposable elements

Genome biology(2021)10.1186/s13059-021-02409-9

N/A

0DataRank · unranked

44 citations

Hayley Sanderson, Cédric Feschotte, Julius Judd

Mosaic cis-regulatory evolution drives transcriptional partitioning of HERVH endogenous retrovirus in the human embryo

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.08.451617

N/A

0DataRank · unranked

4 citations

Manvendra Singh, Gabrijela Dumbović, Jason D. Chobirko, John L. Rinn, Cédric Feschotte +1 more

Roles of transposable elements in the regulation of mammalian transcription

Nature Reviews Molecular Cell Biology(2022)10.1038/s41580-022-00457-y

N/A

0DataRank · unranked

479 citations

Julius Judd, Cédric Feschotte, Joanna Wysocka, Raquel Fueyo

A comprehensive SARS-CoV-2–human protein–protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets

Nature Biotechnology(2022)10.1038/s41587-022-01474-0

N/A

0DataRank · unranked

203 citations

Yuan Liu, Shagun Gupta, Mauricio I. Paramo, Yuan Hou, Chengsheng Mao +18 more

Evolution and antiviral activity of a human protein of retroviral origin

Science(2022)10.1126/science.abq7871

N/A

0DataRank · unranked

86 citations

Manvendra Singh, Harrison B. Cullen, Raphael A. Kirou, Meriem Benkaddour-Boumzaouad, José Luis Cortés +4 more

Single-Cell Analysis Reveals Unexpected Cellular Changes and Transposon Expression Signatures in the Colonic Epithelium of Treatment-Naïve Adult Crohn’s Disease Patients

Cellular and Molecular Gastroenterology and Hepatology(2022)10.1016/j.jcmgh.2022.02.005

N/A

0DataRank · unranked

58 citations

Meaghan M. Kennedy Ng, Sean V. Connelly, Manvendra Singh, Matthew R. Schaner, Michael T. Shanahan +16 more

Contribution of unfixed transposable element insertions to human regulatory variation

Philosophical Transactions of the Royal Society B Biological Sciences(2020)10.1098/rstb.2019.0331

N/A

0DataRank · unranked

48 citations

Nicolas Arce Zevallos, Cédric Feschotte, Clément Goubert

Transposon control as a checkpoint for tissue regeneration

Development(2022)10.1242/dev.191957

N/A

0DataRank · unranked

16 citations

Nornubari A. Bagia, Cédric Feschotte, Krista M. Angileri

Zebrafish transposable elements show extensive diversification in age, genomic distribution, and developmental expression

Genome Research(2022)10.1101/gr.275655.121

N/A

0DataRank · unranked

84 citations

Quirze Rovira, Jonathan N. Wells, Cédric Feschotte, Juan M. Vaquerizas, Ni-Chen Chang

HIV-1 Remission: Accelerating the Path to Permanent HIV-1 Silencing

Viruses(2023)10.3390/v15112171

N/A

0DataRank · unranked

16 citations

Priti Kumar, Nadia R. Roan, Patricia Defechereux, Cédric Feschotte, Ulrike C. Lange +18 more

Massive invasion of organellar DNA drives nuclear genome evolution in Toxoplasma

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2308569120

N/A

0DataRank · unranked

14 citations

Cheng Sun, A. Bah, Jenna Oberstaller, Edwin Pierre-Louis, Ronald Drew Etheridge +4 more

Transposable elements drive the evolution of metazoan zinc finger genes

Genome Research(2023)10.1101/gr.277966.123

N/A

0DataRank · unranked

45 citations

Ni-Chen Chang, John K. McCormick, Caitlyn Coleman, Nathalie Ramos, Bozhou Jin +2 more

PNMA2 forms non-enveloped virus-like capsids that trigger paraneoplastic neurological syndrome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.09.527862

N/A

0DataRank · unranked

4 citations

Simon Erlendsson, Manvendra Singh, Matthew Regier, Iosune Ibiricu, Gregory S. Day +6 more

Massive invasion of organellar DNA drives nuclear genome evolution in Toxoplasma

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.22.539837

N/A

0DataRank · unranked

2 citations

Cheng Sun, A. Bah, Jenna Oberstaller, Edwin Pierre-Louis, Ronald Drew Etheridge +4 more

Transposable elements may enhance antiviral resistance in HIV-1 elite controllers

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.11.571123

N/A

0DataRank · unranked

2 citations

Sabrina M. Leddy, L. Iñiguez, Matthew L. Bendall, Douglas F. Nixon, Cédric Feschotte +1 more

A Single-Cell RNA Expression Map of Human Coronavirus Entry Factors

Cell Reports(2020)10.1016/j.celrep.2020.108175

N/A

0DataRank · unranked

266 citations

Vikas Bansal, Cédric Feschotte, Manvendra Singh

PNMA2 forms immunogenic non-enveloped virus-like capsids associated with paraneoplastic neurological syndrome

Cell(2024)10.1016/j.cell.2024.01.009

N/A

0DataRank · unranked

35 citations

Simon Erlendsson, Manvendra Singh, G. Aaron Holling, Matthew Regier, Iosune Ibiricu +11 more

Rapid evolution of piRNA clusters in the Drosophila melanogaster ovary

Genome Research(2024)10.1101/gr.278062.123

N/A

0DataRank · unranked

17 citations

Cédric Feschotte, Andrew G. Clark, Satyam P. Srivastav

Gag proteins encoded by endogenous retroviruses are required for zebrafish development

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.25.586437

N/A

0DataRank · unranked

8 citations

Jonathan N. Wells, Andrew Y. Wang, Phillip Schofield, Yi-Chia Huang, Vinh H. Truong +3 more

Single-Cell Analysis Reveals Unexpected Cellular Changes and Transposon Expression Signatures in the Colonic Epithelium of Treatment-Naive Adult Crohn's Disease Patients

UNC Libraries(2024)10.17615/f1mg-3y26

N/A

0DataRank · unranked

0 citations

Grace Lian, Muneera R. Kapadia, Michael T. Shanahan, Meaghan M. Kennedy Ng, Animesh Jain +16 more

Gag proteins encoded by endogenous retroviruses are required for zebrafish development

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2411446122

N/A

0DataRank · unranked

18 citations

Jonathan N. Wells, Andrew Y. Wang, Phillip Schofield, Yi-Chia Huang, Vinh H. Truong +3 more

Transposable elements may enhance antiviral resistance in HIV-1 elite controllers

Genome biology(2025)10.1186/s13059-025-03484-y

N/A

0DataRank · unranked

9 citations

Sabrina M. Leddy, L. Iñiguez, Matthew L. Bendall, Douglas F. Nixon, Cédric Feschotte +1 more

Mix-and-match between transposable elements and zinc finger proteins fuels genic and regulatory innovation

Current Opinion in Genetics & Development(2025)10.1016/j.gde.2025.102414

N/A

0DataRank · unranked

3 citations

Didier Trono, Cédric Feschotte, Olga Rosspopoff

Temperature and genetic background drive mobilization of diverse transposable elements in a global human fungal pathogen

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.19.654958

N/A

0DataRank · unranked

2 citations

Vesper Fraunfelter, Samantha Shaltz, John F. McCormick, Callan Schroeder, John R. Perfect +4 more

Cédric Feschotte

Indexed papers

Top data-sharing exemplar

Papers