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Patterns of Subnet Usage Reveal Distinct Scales of Regulation in the Transcriptional Regulatory Network of Escherichia coli

PLoS Computational Biology(2010)10.1371/journal.pcbi.1000836Source: DataRank Database

Patterns of Subnet Usage Reveal Distinct Scales of Regulation in the Transcriptional Regulatory Network of Escherichia coli is a research paper published in PLoS Computational Biology (2010). On theSindex it has a DataRank of 0.595. It has been cited 15 times, with 6 citing works in its 1-hop citation network.

N/A

0.595DataRank · unranked

Scored on demand from live citation data

Open Access15 citations · 6 citing works in its network

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Linked data & code

Patterns of subnet usage reveal distinct scales of regulation in the transcriptional regulatory network of Escherichia coli · arXiv

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Impact (FWCI 1.25)OA: goldTopics (35)Linked Datasets (1)DataCite Reuse (1)IDs (PubMed, PMC, OpenAlex)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (1/2)

Open Access

Interoperable (2/2)

DataCite relations
Linked datasets

Reusable (0/3)

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DataRank Breakdown

Base Score 70%Citation Network 30%

Base Score Contribution

0.416

From this paper's citation signal

Citation Network Contribution

0.179

From 5 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 6 citers.

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Authors (5)

Fabian Joachim Theis ORCID,Larry S. Liebovitch ORCID,Marc-Thorsten Hütt,Marc‐Thorsten Hütt ORCID,Carsten Marr ORCID

Live enrichment

PubMed:20617198 PMC:PMC2895633 OpenAlex:https://openalex.org/W2066466074

FWCI

1.25

Citation Percentile

0.8%

Citation Trend

2012

2013

2015

2019

2023

goldLicense: cc-by

journalhttps://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000836&type=printable

publisherhttps://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000836&type=printable

publisherhttp://dx.plos.org/10.1371/journal.pcbi.1000836

journalhttps://doi.org/10.1371/journal.pcbi.1000836

repositoryhttps://pubmed.ncbi.nlm.nih.gov/20617198

Fields of Study

Gene Regulatory Network AnalysisEvolution and Genetic DynamicsBioinformatics and Genomic NetworksAmino Acid MotifsCluster AnalysisComputational BiologyEscherichia coliGene Expression Regulation, BacterialGene Regulatory NetworksRNATranscription FactorsTranscription, Genetic

MeSH Terms

Escherichia coliRNATranscription FactorsTranscription, GeneticGene Expression Regulation, BacterialCluster AnalysisComputational BiologyAmino Acid MotifsGene Regulatory Networks

Keywords

BiologySubnetGeneGene expressionGeneticsTranscriptional regulationRegulation of gene expressionGene regulatory networkEscherichia coliTranscription (linguistics)Computational biologyRNAComputer scienceComputer network

Sustainable Development Goals

SDG 0: Life in Land

Patterns of subnet usage reveal distinct scales of regulation in the transcriptional regulatory network of Escherichia coli

10.48550/arxiv.1005.4397arXiv

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