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Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes

eLife(2023)10.7554/elife.82201Source: DataRank Database

Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes is a dataset published in eLife (2023). On theSindex it has a DataRank of 1.3, placing it in the top 15.6% of the data-sharing corpus. It has been cited 73 times, with 43 citing works in its 1-hop citation network.

Top 16%percentile

1.3DataRank

Ranks in the top 16% for downstream scientific impact

Data paper Open Access73 citations · 43 citing works in its network

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Linked data & code

Data for: Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes · Dryad

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (20 grants)Impact (FWCI 6.91)OA: goldTopics (26)Linked Datasets (1)DataCite Reuse (1)IDs (PubMed, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (1/2)

Open Access

Interoperable (2/2)

DataCite relations
Linked datasets

Reusable (1/3)

Dataset classification

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DataRank Breakdown

Base Score 49%Citation Network 51%

Base Score Contribution

0.646

From this paper's citation signal

Citation Network Contribution

0.677

From 29 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 43 citers.

Protocol for the isolation of silk glands from silkworms for snRNA-seq and spatial transcriptomics
STAR Protocols20251 citations9 referencesContributes 0.077
FlyPhoneDB2: A computational framework for analyzing cell-cell communication in Drosophila scRNA-seq data integrating AlphaFold-multimer predictions
Computational and Structural Biotechnology Journal20255 citations34 referencesContributes 0.053
Chromosome-specific maturation of the epigenome in the Drosophila male germline
eLife202318 citations58 referencesContributes 0.051
Rbp4-Gal4, a germline driver that activates in meiosis, reveals functions for VCP in spermatid development
Fly20235 citations38 referencesContributes 0.047
scRNA-seq Reveals Novel Genetic Pathways and Sex Chromosome Regulation in Tribolium Spermatogenesis
Genome Biology and Evolution20248 citations47 referencesContributes 0.047

Authors (24)

Gabriela S. Vida ORCID,Sarah R. Stern ORCID,Sharvani Mahadevaraju ORCID,Jaclyn M. Fingerhut ORCID,Jennifer M. Viveiros ORCID

Live enrichment

PubMed:36795469 OpenAlex:https://openalex.org/W4321003566

National Institutes of Health

Grant: 1F32GM143850-01

National Institutes of Health

Grant: T32GM008216

National Institutes of Health

Grant: 1F31HD108918-01

National Science Foundation

Grant: 2022305201

National Science Foundation

Grant: 2021316576

National Institutes of Health

Grant: T32GM007790

National Institutes of Health

Grant: T32AR007422

Canadian Institutes of Health Research

Grant: PJT-133743

Natural Sciences and Engineering Research Council of Canada

Grant: RGPIN-2016-06775

Natural Sciences and Engineering Research Council of Canada

Grant: RGPIN-2022-05163

National Institutes of Health

Grant: R35GM136665

National Institutes of Health

Grant: R01HD052937

National Institutes of Health

Grant: R35GM136433

Stanford University

Grant: Reed-Hodgson Professorship in Human Biology

National Institutes of Health

Grant: R00AG062746

Cancer Prevention and Research Institute of Texas

Grant: RR200063

National Institutes of Health

Grant: R35GM136270

Biotechnology and Biological Sciences Research Council

Grant: BB/P001564/1

National Institutes of Health

Grant: NIDDK Intramural Research Program

Stanford University

Grant: Katherine Dexter McCormick and Stanley McCormick Memorial Professorship

FWCI

6.91

Citation Percentile

1.0%

Citation Trend

2023

2024

2025

2026

goldLicense: cc-by

journalhttps://doi.org/10.7554/elife.82201

publisherhttps://doi.org/10.7554/elife.82201

publisherhttps://cdn.elifesciences.org/articles/82201/elife-82201-v2.pdf

publisherhttps://cdn.elifesciences.org/articles/82201/elife-82201-v2.xml

publisherhttps://elifesciences.org/articles/82201

Fields of Study

Single-cell and spatial transcriptomicsGenetics, Aging, and Longevity in Model OrganismsCRISPR and Genetic Engineering

MeSH Terms

RNA-SeqAnimalsDrosophilaMaleSemenTestisAdult Stem Cells

Keywords

BiologyGermlineSomatic cellRNA-SeqChromatinStem cellGeneticsGerm cellCell biologyCellular differentiationSingle-cell analysisComputational biologyGeneCellTranscriptomeGene expression

Data for: Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes

10.5061/dryad.m63xsj454Dryad