Tor Savidge

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 34 papers. Top paper: “Probiotic VSL#3 Treatment Reduces Colonic Permeability and Abdominal Pain Symptoms in Patients With Irritable Bowel Syndrome”.

Probiotic VSL#3 Treatment Reduces Colonic Permeability and Abdominal Pain Symptoms in Patients With Irritable Bowel Syndrome

Frontiers in Pain Research(2021)10.3389/fpain.2021.691689

N/A

0.768DataRank · unranked

18 citations

Jordan Shapiro, Emily B. Hollister, Shyam Badu, Qinglong Wu, Erica M. Weidler +8 more

Use of human tissue stem cell-derived organoid cultures to model enterohepatic circulation

American Journal of Physiology-Gastrointestinal and Liver Physiology(2021)10.1152/ajpgi.00177.2021

N/A

0.638DataRank · unranked

16 citations

Sue E. Crawford, Carolyn Bomidi, Xi‐Lei Zeng, James R. Broughman, Matthew J. Robertson +8 more

Matrix metalloproteinase 7 contributes to intestinal barrier dysfunction by degrading tight junction protein Claudin-7

Frontiers in Immunology(2022)10.3389/fimmu.2022.1020902

N/A

0.609DataRank · unranked

57 citations

Haifeng Lian, Xiaoying S. Zhong, Srikruthi S. Krishnachaitanya, Yingzi Cong, Roderick H. Dashwood +5 more

Sex-Bias in Irritable Bowel Syndrome: Linking Steroids to the Gut-Brain Axis

Frontiers in Endocrinology(2021)10.3389/fendo.2021.684096

N/A

0.606DataRank · unranked

56 citations

Tor Savidge, Sik Yu So

Antibiotic exposure postweaning disrupts the neurochemistry and function of enteric neurons mediating colonic motor activity

American Journal of Physiology-Gastrointestinal and Liver Physiology(2020)10.1152/ajpgi.00088.2020

N/A

0.568DataRank · unranked

43 citations

Pavitha Parathan, Prapaporn Boonma, Qinglong Wu, Yi Wang, Anthony M. Haag +5 more

Intestinal Epithelial Serotonin as a Novel Target for Treating Disorders of Gut-Brain Interaction and Mood

Gastroenterology(2024)10.1053/j.gastro.2024.11.012

N/A

0.568DataRank · unranked

43 citations

Nuno Dinis Alves, Andrew Del Colle, Ardesheer Talati, Sarah A. Najjar, Virginie Bouchard +27 more

Leveraging human microbiomes for disease prediction and treatment

Trends in Pharmacological Sciences(2024)10.1016/j.tips.2024.11.007

N/A

0.530DataRank · unranked

13 citations

Tor Savidge, Henok Ayalew Tegegne

Sex-Dependent Efficacy of Dietary Fiber in Pediatric Functional Abdominal Pain

Gastroenterology(2023)10.1053/j.gastro.2023.12.011

N/A

0.527DataRank · unranked

6 citations

Shyam Badu, Qinglong Wu, Nazlı Yalçınkaya, Yiming Mirabile, Robert Castaneda +5 more

G ut microbiome metagenomics in clinical practice: bridging the gap between research and precision medicine

Gut Microbes(2025)10.1080/19490976.2025.2569739

N/A

0.524DataRank · unranked

32 citations

Tor Savidge, Henok Ayalew Tegegne

Common Variable Immunodeficiency Patient Fecal Microbiota Transplant Recapitulates Gut Dysbiosis

Research Square(2023)10.21203/rs.3.rs-2640584/v1

N/A

0.519DataRank · unranked

8 citations

Anita Y. Voigt, Margaret E. Conner, Alton G. Swennes, Stephanie Fowler, Chadi A. Calarge +10 more

Donor-recipient specificity and age-dependency in fecal microbiota therapy and probiotic resolution of gastrointestinal symptoms

npj Biofilms and Microbiomes(2023)10.1038/s41522-023-00421-4

N/A

0.373DataRank · unranked

11 citations

Prapaporn Boonma, Shyam Badu, Nazlı Yalçınkaya, Sik Yu So, Kevin W. Garey +6 more

KOMB: K-core based de novo characterization of copy number variation in microbiomes

Computational and Structural Biotechnology Journal(2022)10.1016/j.csbj.2022.06.019

N/A

0.360DataRank · unranked

10 citations

Nicolae Sapoval, Charlie Seto, R. A. Leo Elworth, Yilei Fu, Michael Nute +4 more

Exploration of associations among dietary tryptophan, microbiome composition and function, and symptom severity in irritable bowel syndrome

Neurogastroenterology & Motility(2023)10.1111/nmo.14545

N/A

0.292DataRank · unranked

6 citations

Kendra Kamp, Qinglong Wu, Li Chen, Linda Yoo, Robert L. Burr +9 more

Multisite Detection of Tn 1549 -Mediated vanB Vancomycin Resistance in Multidrug-Resistant Enterococcus faecalis ST6 in Texas and Florida

Antimicrobial Agents and Chemotherapy(2022)10.1128/aac.01284-22

N/A

0.241DataRank · unranked

4 citations

Truc T. Tran, Kirsten Rydell, Diana Panesso, German Contreras, José M. Munita +10 more

Translational Aspects of the Immunology of Clostridioides difficile Infection: Implications for Pediatric Populations

Journal of the Pediatric Infectious Diseases Society(2021)10.1093/jpids/piab089

N/A

0.165DataRank · unranked

2 citations

Joseph P. Zackular, Tor Savidge, Larry K. Kociolek

Developing a standardized but extendable framework to increase the findability of infectious disease datasets

Scientific Data(2023)10.1038/s41597-023-01968-9

N/A

0DataRank · unranked

18 citations

Marco Alvarado Cano, José Bento, Candice Czech, Mengjia Kang, Lars Pache +15 more

Gut microbiome and symptoms in females with irritable bowel syndrome: a cross-sectional analysis

Beneficial Microbes(2024)10.1163/18762891-bja00015

N/A

0DataRank · unranked

5 citations

Anna Plantinga, Kevin C. Cain, Robert L. Burr, C.-S. Tsai, Qinglong Wu +6 more

Impact of gut health and microbiome on autism spectrum disorder

Translational Pediatrics(2024)10.21037/tp-24-84

N/A

0DataRank · unranked

1 citations

Tor Savidge, Sik Yu So

Early life interaction between the microbiota and the enteric nervous system

American Journal of Physiology-Gastrointestinal and Liver Physiology(2020)10.1152/ajpgi.00288.2020

N/A

0DataRank · unranked

47 citations

Lin Y. Hung, Sabrina Poon, Tor Savidge, Joel C. Bornstein, Jaime P. P. Foong

Gut dysbiosis patterns in CVID patients with noninfectious complications observed in a germ-free mouse model through fecal microbiota transplantation

Journal of Human Immunity(2025)10.70962/jhi.20250040

N/A

0DataRank · unranked

1 citations

Anita Y. Voigt, Margaret E. Conner, Alton G. Swennes, Stephanie Fowler, Chadi A. Calarge +10 more

Alterations of the Oral Microbiome and Cumulative Carbapenem Exposure Are Associated With Stenotrophomonas maltophilia Infection in Patients With Acute Myeloid Leukemia Receiving Chemotherapy

Clinical Infectious Diseases(2020)10.1093/cid/ciaa778

N/A

0DataRank · unranked

32 citations

Pranoti Sahasrabhojane, Dimitrios P. Kontoyiannis, Tor Savidge, César A. Arias, Nadim J. Ajami +3 more

Systems biology analysis of the Clostridioides difficile core-genome contextualizes microenvironmental evolutionary pressures leading to genotypic and phenotypic divergence

npj Systems Biology and Applications(2020)10.1038/s41540-020-00151-9

N/A

0DataRank · unranked

30 citations

Heather A. Danhof, Colleen K. Brand, Numan Oezguen, Firas S. Midani, Bernhard Ø. Palsson +5 more

A multisite genomic epidemiology study of Clostridioides difficile infections in the U.S. supports differential roles of healthcare versus community spread for two common strains

medRxiv(2020)10.1101/2020.11.28.20240192

N/A

0DataRank · unranked

1 citations

Vincent B. Young, Eric G. Pamer, Tor Savidge, Mini Kamboj, Kevin W. Garey +2 more

KOMB: Graph-Based Characterization of Genome Dynamics in Microbial Communities

(2020)10.1101/2020.05.21.109587

N/A

0DataRank · unranked

0 citations

Nicolae Sapoval, Charlie Seto, R. A. Leo Elworth, Michael Nute, Tor Savidge +3 more

Bile acid-independent protection against Clostridioides difficile infection

PLoS Pathogens(2021)10.1371/journal.ppat.1010015

N/A

0DataRank · unranked

103 citations

Nazlı Yalçınkaya, Qinglong Wu, Alton G. Swennes, Mary Elizabeth M. Tessier, Paul Roberts +4 more

Emu: Species-Level Microbial Community Profiling for Full-Length Nanopore 16S Reads

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.02.442339

N/A

0DataRank · unranked

16 citations

Qi Wang, Michael Nute, Alona Tyshaieva, Elizabeth Reeves, Sirena Soriano +9 more

Systematic Analysis of Mobile Genetic Elements Mediating β-Lactamase Gene Amplification in Noncarbapenemase-Producing Carbapenem-Resistant Enterobacterales Bloodstream Infections

mSystems(2022)10.1128/msystems.00476-22

N/A

0DataRank · unranked

43 citations

Anna Konovalova, Patrick M. McDaneld, Marc Gohel, Benjamin Strope, Pranoti Sahasrabhojane +12 more

Mathematical models to study the biology of pathogens and the infectious diseases they cause

iScience(2022)10.1016/j.isci.2022.104079

N/A

0DataRank · unranked

22 citations

Jonathan M. Monk, Saugat Poudel, Charles J. Norsigian, Anand V. Sastry, Chen Liao +15 more

Randomized placebo-controlled trial of oral tannin supplementation on COVID-19 symptoms, gut dysbiosis and cytokine response

Journal of Functional Foods(2022)10.1016/j.jff.2022.105356

N/A

0DataRank · unranked

11 citations

Andrea Pisarevsky, Shyam Badu, Qinglong Wu, Fabiana López Mingorance, Patricia Vega +12 more

Reduced calorie diet combined with NNMT inhibition establishes a distinct microbiome in DIO mice

Scientific Reports(2022)10.1038/s41598-021-03670-5

N/A

0DataRank · unranked

5 citations

Qinglong Wu, Jerrin T. Wiley, Aditya Eswar, Harshini Neelakantan, Tor Savidge +2 more

Developing a standardized but extendable framework to increase the findability of infectious disease datasets

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.10.511492

N/A

0DataRank · unranked

0 citations

Marco Alvarado Cano, José Bento, Candice Czech, Mengjia Kang, Lars Pache +14 more

The pan-microbiome profiling system Taxa4Meta identifies clinical dysbiotic features and classifies diarrheal disease

Journal of Clinical Investigation(2023)10.1172/jci170859

N/A

0DataRank · unranked

4 citations

Shyam Badu, Sik Yu So, Todd J. Treangen, Tor Savidge, Qinglong Wu

Exploring the Role of Vitamin D and the Gut Microbiome: A Cross-Sectional Study of Individuals with Irritable Bowel Syndrome and Healthy Controls

Biological Research For Nursing(2023)10.1177/10998004221150395

N/A

0DataRank · unranked

5 citations

Anna Plantinga, Robert L. Burr, Kevin C. Cain, Tor Savidge, Kendra Kamp +2 more

Addressing barriers in FAIR data practices for biomedical data

Scientific Data(2023)10.1038/s41597-023-01969-8

N/A

0DataRank · unranked

66 citations

Ginger Tsueng, Jack DiGiovanna, Thomas D. Horvath, Luke V. Rasmussen, Tor Savidge +8 more