Danny E. Miller

Also affiliated with Brotman Baty Institute

MedicineNeuroscienceBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

23.7Author DataRank

Indexed papers

12in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 12 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The complete sequence of a human genome

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.26.445798

Top 2%

8.2DataRank

Top 2%182 citations

Sergey Koren, Arang Rhie, Allison A. Regier, Andrey V. Bzikadze, Alla Mikheenko +97 more

Papers

Driven by 64 papers — median percentile 68. Top paper: “The complete sequence of a human genome”.

The complete sequence of a human genome

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.26.445798

Top 2%

8.2DataRank

Top 2%182 citations

Sergey Koren, Arang Rhie, Allison A. Regier, Andrey V. Bzikadze, Alla Mikheenko +97 more

The complete sequence of a human genome

Science(2022)10.1126/science.abj6987

Top 3%

7.0DataRank

Top 3%3361 citations

Sergey Koren, Arang Rhie, Allison A. Regier, Andrey V. Bzikadze, Alla Mikheenko +94 more

A complete reference genome improves analysis of human genetic variation

Science(2022)10.1126/science.abl3533

Top 5%

4.4DataRank

Top 5%437 citations

Stephanie M. Yan, Daniela C. Soto, Melanie Kirsche, Samantha Zarate, Pavel Avdeyev +28 more

High-coverage nanopore sequencing of samples from the 1000 Genomes Project to build a comprehensive catalog of human genetic variation

Genome Research(2024)10.1101/gr.279273.124

Top 13%

1.7DataRank

Top 13%78 citations

Sophia B Gibson, Nikhita Damaraju, Miranda Pg Zalusky, Kendra Hoekzema, David Twesigomwe +42 more

Highly contiguous assemblies of 101 drosophilid genomes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.14.422775

Top 23%

0.878DataRank

Top 23%22 citations

Jeremy Wang, Danny E. Miller, Olga Barmina, Emily Delaney, Ammon Thompson +34 more

Targeted long-read sequencing identifies missing disease-causing variation

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.06.006

N/A

0.825DataRank · unranked

243 citations

Arvis Sulovari, Tianyun Wang, Hailey Loucks, Kendra Hoekzema, Katherine M. Munson +45 more

Diagnostic utility of DNA methylation analysis in genetically unsolved pediatric epilepsies and CHD2 episignature refinement

Nature Communications(2024)10.1038/s41467-024-50159-6

N/A

0.489DataRank · unranked

25 citations

Cassandra Rastin, Soham Sengupta, Helen E. Pennington, Sophie Russ-Hall, Amy Schneider +50 more

Rapid low-cost assembly of the Drosophila melanogaster reference genome using low-coverage, long-read sequencing

10.1101/267401

N/A

0.465DataRank · unranked

9 citations

Mahul Chakraborty, Danny E. Miller, Shannon Kalsow, Kate Hall, Anoja G. Perera +3 more

Population-scale variability at short tandem repeat loci reveals pathogenicity signature

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.06.631535

Top 41%

0.461DataRank

Top 41%11 citations

Isaac Xu, Sarah Fazal, Egor Dolzhenko, David Pellerin, Ben Weisburd +30 more

Genome Report: chromosome-scale genome assembly of the African spiny mouse (Acomys cahirinus)

G3 Genes Genomes Genetics(2023)10.1093/g3journal/jkad177

Top 44%

0.421DataRank

Top 44%7 citations

Vahid Nikoonejad Fard, Bernard Kim, Sarah Collins, Miranda Galey, Branden R. Nelson +14 more

Patterns of crossover distribution in Drosophila mauritiana necessitate a re-thinking of the centromere effect on crossing over

Genetics(2025)10.1093/genetics/iyaf039

N/A

0.359DataRank · unranked

9 citations

Andrew J. Price, Hua Li, Madhav Jagannathan, Cynthia Staber, Stacie E. Hughes +7 more

Alpha Satellite Insertion Close to an Ancestral Centromeric Region

Molecular Biology and Evolution(2021)10.1093/molbev/msab244

N/A

0.357DataRank · unranked

6 citations

Glennis A. Logsdon, Nicolas Chatron, Danny E. Miller, Julie Reversat, Katherine M. Munson +9 more

GENOME REPORT: Chromosome-scale genome assembly of the African spiny mouse ( Acomys cahirinus )

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.03.535372

Top 57%

0.279DataRank

Top 57%4 citations

Vahid Nikoonejad Fard, Bernard Kim, Sarah Collins, Miranda Galey, Branden R. Nelson +14 more

Beyond the exome: what's next in diagnostic testing for Mendelian conditions

arXiv (Cornell University)(2023)10.48550/arxiv.2301.07363

N/A

0.269DataRank · unranked

5 citations

Chloe Reuter, Shruti Marwaha, Medhat Mahmoud, Michael Duyzend, Hayk Barseghyan +19 more

De novo missense variants in exon 9 of SEPHS1 cause a neurodevelopmental condition with developmental delay, poor growth, hypotonia, and dysmorphic features

The American Journal of Human Genetics(2024)10.1016/j.ajhg.2024.02.016

N/A

0.269DataRank · unranked

5 citations

Kaitlyn Kiernan, Erin Torti, Ethan Pavlovsky, Nicholas Tilton, Austin Sekula +35 more

Dominant‐negative variant in SLC1A4 causes an autosomal dominant epilepsy syndrome

Annals of Clinical and Translational Neurology(2023)10.1002/acn3.51786

N/A

0.241DataRank · unranked

4 citations

Ghayda Mirzaa, Elizabeth Blue, Giuseppe Albano, Danny E. Miller, Aimee Allworth +28 more

Pangenome discovery of missing autism variants

medRxiv(2025)10.1101/2025.07.21.25331932

Top 63%

0.216DataRank

Top 63%3 citations

Jiadong Lin, Michelle D. Noyes, Young-Jun Kwon, Isaac Wong, Nidhi Koundinya +23 more

Identification of GGC Repeat Expansions in ZFHX3 among Chilean Movement Disorder Patients

Movement Disorders(2025)10.1002/mds.30242

N/A

0.208DataRank · unranked

3 citations

Abraham Moller, Kensuke Daida, Pilar Álvarez Jerez, Zhongbo Chen, Zachary B. Anderson +18 more

Using the linear references from the pangenome to discover missing autism variants

Nature Communications(2026)10.1038/s41467-026-68378-4

Top 65%

0.208DataRank

Top 65%3 citations

Jiadong Lin, Michelle D. Noyes, Young-Jun Kwon, Isaac Wong, Nidhi Koundinya +252 more

Heterozygous Inversion Breakpoints Suppress Meiotic Crossovers by Altering Recombination Repair Outcomes

10.1101/2022.11.09.515852

N/A

0.165DataRank · unranked

2 citations

Erica Berent, Savannah Hadjipanteli, Miranda Galey, Danny E. Miller, Nicole Crown +1 more

Subdural hemorrhage, macrocephaly, rash, and developmental delay in an infant: A pathogenic variant in NLRP3 causes CINCA/NOMID

American Journal of Medical Genetics Part A(2023)10.1002/ajmg.a.63366

N/A

0.104DataRank · unranked

1 citations

Aviya Lanis, Samuel G. Finlayson, Susan Canny, Elana A. Feldman, Danny E. Miller +5 more

Diagnostic Utility of Genome-wide DNA Methylation Analysis in Genetically Unsolved Developmental and Epileptic Encephalopathies and Refinement of a CHD2 Episignature

medRxiv(2023)10.1101/2023.10.11.23296741

N/A

0DataRank · unranked

1 citations

Cassandra Rastin, Soham Sengupta, Helen E. Pennington, Sophie Russ-Hall, Amy Schneider +48 more

A distant global control region is essential for normal expression of anterior HOXA genes during mouse and human craniofacial development

Nature Communications(2024)10.1038/s41467-023-44506-2

N/A

0DataRank · unranked

16 citations

Eva D’haene, Machteld Baetens, Tara N. Yankee, Emma Wentworth Winchester, Nicole Glidden +13 more

Long-Read DNA and RNA Sequencing to Streamline Clinical Genetic Testing and Reduce Barriers to Comprehensive Genetic Testing

The Journal of Applied Laboratory Medicine(2024)10.1093/jalm/jfad107

N/A

0DataRank · unranked

16 citations

Angela L Miller, Danny E. Miller, Nikhita Damaraju

3-hour genome sequencing and targeted analysis to rapidly assess genetic risk

Genetics in Medicine Open(2024)10.1016/j.gimo.2024.101833

N/A

0DataRank · unranked

13 citations

Jonas A. Gustafson, Stephanie C. Bohaczuk, Benjamin J. Mallory, Paxton Reed, Tara Wenger +14 more

Combined approaches, including long-read sequencing, address the diagnostic challenge of HYDIN in primary ciliary dyskinesia

European Journal of Human Genetics(2024)10.1038/s41431-024-01599-7

N/A

0DataRank · unranked

13 citations

Miranda Galey, Lizi Briggs, Matthew Edwards, Claire Hogg, Shibu John +18 more

Clinical RNA sequencing clarifies variants of uncertain significance identified by prior testing

Genetics in Medicine Open(2024)10.1016/j.gimo.2024.101886

N/A

0DataRank · unranked

7 citations

Jennifer N. Cech, Cate Paschal, Bri Dingmann, Anna I. Scott, Jenny Thies +24 more

CFAP47 is Implicated in X-Linked Polycystic Kidney Disease

Kidney International Reports(2024)10.1016/j.ekir.2024.09.013

N/A

0DataRank · unranked

4 citations

Takuya Fujimaru, Chunyu Liu, Karynne Patterson, Kouhei Yamamoto, Takefumi Suzuki +63 more

Dual diagnosis of UQCRFS1-related mitochondrial complex III deficiency and recessive GJA8-related cataracts

Rare(2024)10.1016/j.rare.2024.100040

N/A

0DataRank · unranked

3 citations

Samuel J. Huang, Alyna Khan, Katie Golden‐Grant, Brenna Boyd, Elisabeth A. Rosenthal +37 more

Concordance of whole-genome long-read sequencing with standard clinical testing for Prader-Willi and Angelman syndromes

medRxiv(2024)10.1101/2024.04.02.24305233

N/A

0DataRank · unranked

1 citations

Miranda Galey, Anita E. Beck, Madelyn A. Gillentine, Jaya Narayanan, Nikhita Damaraju +4 more

A Diagnostic Blind Spot: Deep intronic SVA_E Insertion identified as the most Common Pathogenic Variant Associated with Canavan Disease

medRxiv(2024)10.1101/2024.12.18.24318806

N/A

0DataRank · unranked

1 citations

Katrina M. Bell, Ramakrishnan Rajagopalan, M. De Silva, Aída Lemes, Cristina Zoco Zabala +24 more

CFAP47 is a novel causative gene implicated in X-linked polycystic kidney disease

medRxiv(2024)10.1101/2024.04.05.24304760

N/A

0DataRank · unranked

0 citations

Takuya Fujimaru, Chunyu Liu, Karynne Patterson, Kouhei Yamamoto, Takefumi Suzuki +18 more

GREGoR: accelerating genomics for rare diseases

Nature(2025)10.1038/s41586-025-09613-8

N/A

0DataRank · unranked

15 citations

Ben Heavner, Marsha M. Wheeler, Rachel A. Ungar, Jonathan LoTempio, Laurens Wiel +94 more

An optimized variant prioritization process for rare disease diagnostics: recommendations for Exomiser and Genomiser

Genome Medicine(2025)10.1186/s13073-025-01546-1

N/A

0DataRank · unranked

8 citations

Shruti Marwaha, Alistair Ward, Shilpa N. Kobren, Jennefer N. Carter, Undiagnosed Diseases Network +94 more

SeqFirst: Building equity access to a precise genetic diagnosis in critically ill newborns

The American Journal of Human Genetics(2025)10.1016/j.ajhg.2025.02.003

N/A

0DataRank · unranked

16 citations

Abbey Scott, Lukas Kruidenier, Megan Sikes, Alexandra Keefe, Kati J. Buckingham +28 more

Concordance of Whole-Genome Long-Read Sequencing with Standard Clinical Testing for Prader-Willi and Angelman Syndromes

Journal of Molecular Diagnostics(2025)10.1016/j.jmoldx.2024.12.003

N/A

0DataRank · unranked

6 citations

Miranda P.G. Zalusky, Anita E. Beck, Madelyn A. Gillentine, Jaya Narayanan, Nikhita Damaraju +4 more

Splice-modulating antisense oligonucleotides targeting a pathogenic intronic variant in adult polyglucosan body disease correct mis-splicing and restore enzyme activity in patient cells

Nucleic Acids Research(2025)10.1093/nar/gkaf658

N/A

0DataRank · unranked

5 citations

Emily Miyoshi, Hasan O. Akman, Sophie Storz, Joy Goffena, Julia Pytte +4 more

Deep Intronic SVA_E Insertion Identified as the Most Common Pathogenic Variant Associated With Canavan Disease

Neurology Genetics(2025)10.1212/nxg.0000000000200291

N/A

0DataRank · unranked

3 citations

Katrina M. Bell, Ramakrishnan Rajagopalan, M. De Silva, Aída Lemes, Cristina Zoco Zabala +24 more

Bidirectional disruption of GNAS transcripts causes broad methylation defects in pseudohypoparathyroidism type 1B

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2423271122

N/A

0DataRank · unranked

3 citations

Monica Reyes, Anna Ryabets‐Lienhard, Barbara Gales, Agnès Linglart, Danny E. Miller +4 more

Long-Read Sequencing is Required for Precision Diagnosis of Incontinentia Pigmenti

Research Square(2025)10.21203/rs.3.rs-5811417/v1

N/A

0DataRank · unranked

0 citations

Robin D. Clark, Abdallah F. Elias, Casie A. Genetti, Jill A. Madden, Dana Simpson +21 more

Long-read sequencing is required for precision diagnosis of incontinentia pigmenti

Human Genetics and Genomics Advances(2025)10.1016/j.xhgg.2025.100468

N/A

0DataRank · unranked

0 citations

Robin D. Clark, Abdallah F. Elias, Casie A. Genetti, Jill A. Madden, Dana Simpson +21 more

Long‐read DNA sequencing resolves a rare case of alloimmune hemolysis mimicking autoimmune hemolysis

Transfusion(2025)10.1111/trf.18403

N/A

0DataRank · unranked

0 citations

Thomas Ma, Livia Hegerova, Theresa Nester, Nina Sen, Lay See Er +14 more

Complex HPV-human DNA structures revealed by large-scale DNA analyses in an HPV-cancer derived cell line

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.06.680684

N/A

0DataRank · unranked

0 citations

Yoke-Chen Chang, Vandya Rao, Jessie Hollingsworth, Michelle Brown, Debajyoti Kabiraj +11 more

Genetic and epigenetic contributors and mimickers of phenotypic hypoxic-ischemic encephalopathy (HIE)

Seminars in Perinatology(2025)10.1016/j.semperi.2025.152112

N/A

0DataRank · unranked

2 citations

Janessa B. Law, Basel Thayyil, Danny E. Miller, Thomas R. Wood, Niranjana Natarajan +2 more

Complementarity of Long‐Reads and Optical Mapping in Parkinson's Disease for Structural Variants

Annals of Clinical and Translational Neurology(2026)10.1002/acn3.70332

N/A

0DataRank · unranked

0 citations

Theresa Lüth, Susen Schaake, Carolin Gabbert, Marius Möller, Hauke Busch +14 more

A pathway for error-free non-homologous end joining of resected meiotic double-strand breaks

Nucleic Acids Research(2020)10.1093/nar/gkaa1205

N/A

0DataRank · unranked

21 citations

Danny E. Miller, Carolyn A. Turcotte, Margaret C. Miller, Jeff Sekelsky, Talia Hatkevich

Identification and Characterization of Breakpoints and Mutations onDrosophila melanogasterBalancer Chromosomes

G3 Genes Genomes Genetics(2020)10.1534/g3.120.401559

N/A

0DataRank · unranked

17 citations

Lily Kahsai, Kasun Buddika, Michael J. Dixon, Bernard Kim, Brian R. Calvi +4 more

Activating variants in PDGFRB result in a spectrum of disorders responsive to imatinib monotherapy

American Journal of Medical Genetics Part A(2020)10.1002/ajmg.a.61615

N/A

0DataRank · unranked

35 citations

Randall A. Bly, Natalie Wu, Catherine M. Albert, Julie Park, Joseph T.C. Shieh +26 more

Targeted Long-Read Sequencing Identifies a Retrotransposon Insertion as a Cause of Altered GNAS Exon A/B Methylation in a Family With Autosomal Dominant Pseudohypoparathyroidism Type 1b (PHP1B)

Journal of Bone and Mineral Research(2020)10.1002/jbmr.4647

N/A

0DataRank · unranked

29 citations

Patrick Hanna, Miranda Galey, Monica Reyes, Agnès Linglart, Evan E. Eichler +2 more

Targeted long-read sequencing resolves complex structural variants and identifies missing disease-causing variants

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.03.365395

N/A

0DataRank · unranked

10 citations

Arvis Sulovari, Tianyun Wang, Hailey Loucks, Kendra Hoekzema, Katherine M. Munson +32 more

The role of gene dosage in budding yeast centrosome scaling and spontaneous diploidization

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.04.133975

N/A

0DataRank · unranked

1 citations

Zhiyong Xiong, Danny E. Miller, Zulin Yu, Scott McCroskey, William D. Bradford +3 more

Germline gene de-silencing by a transposon insertion is triggered by an altered landscape of local piRNA biogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.26.173187

N/A

0DataRank · unranked

1 citations

Kelley Van Vaerenberghe, Angela Li, Emily K. Grantham, Celeste Cummings, Marilyn Barragan +7 more

Association of Variants in the SPTLC1 Gene With Juvenile Amyotrophic Lateral Sclerosis

JAMA Neurology(2021)10.1001/jamaneurol.2021.2598

N/A

0DataRank · unranked

85 citations

Ruth Chia, Danny E. Miller, Rachel Li, Ravindran Kumaran, Yevgeniya Abramzon +87 more

Further delineation of van den Ende‐Gupta syndrome: Genetic heterogeneity and overlap with congenital heart defects and skeletal malformations syndrome

American Journal of Medical Genetics Part A(2021)10.1002/ajmg.a.62194

N/A

0DataRank · unranked

12 citations

Nisha Patel, John M. Graham, Michael J. Bamshad, Deborah A. Nickerson, Janson J. White +10 more

Targeted long-read sequencing identifies missing pathogenic variants in unsolved Werner syndrome cases

Journal of Medical Genetics(2022)10.1136/jmedgenet-2022-108485

N/A

0DataRank · unranked

26 citations

Lin Lee, Miranda Galey, Renuka Kandhaya‐Pillai, Marc Tischkowitz, Deepak Amalnath +11 more

Paramutation-like Epigenetic Conversion by piRNA at the Telomere of Drosophila virilis

Biology(2022)10.3390/biology11101480

N/A

0DataRank · unranked

6 citations

Martina Dalíková, Stefan Cerbin, Chris M. Stillman, Molly Zych, R. Scott Hawley +6 more

Applications of long-read sequencing to Mendelian genetics

Genome Medicine(2023)10.1186/s13073-023-01194-3

N/A

0DataRank · unranked

98 citations

Danny E. Miller, Evan E. Eichler, Francesco Mastrorosa

Advances in the discovery and analyses of human tandem repeats

Emerging Topics in Life Sciences(2023)10.1042/etls20230074

N/A

0DataRank · unranked

28 citations

Arvis Sulovari, Paul N. Valdmanis, Danny E. Miller, Evan E. Eichler, Mark J. P. Chaisson

Heterozygous inversion breakpoints suppress meiotic crossovers by altering recombination repair outcomes

PLoS Genetics(2023)10.1371/journal.pgen.1010702

N/A

0DataRank · unranked

15 citations

Erica Berent, Savana Hadjipanteli, Miranda Galey, Nigel Muhammad-Lahbabi, Danny E. Miller +2 more

Panels, Exomes, Genomes, and More—Finding the Best Path Through the Diagnostic Odyssey

Pediatric Clinics of North America(2023)10.1016/j.pcl.2023.06.001

N/A

0DataRank · unranked

5 citations

Audrey Squire, Danny E. Miller, Arthur Lenahan

Off-target piRNA gene silencing in Drosophila melanogaster rescued by a transposable element insertion

PLoS Genetics(2023)10.1371/journal.pgen.1010598

N/A

0DataRank · unranked

9 citations

Ana P. Dorador, Kelley Van Vaerenberghe, Angela Li, Emily K. Grantham, Stefan Cerbin +10 more

Congenital pleuropulmonary blastoma in a newborn with a variant of uncertain significance in DICER1 evaluated by RNA-sequencing

Maternal Health Neonatology and Perinatology(2023)10.1186/s40748-023-00148-2

N/A

0DataRank · unranked

6 citations

Timothy J. D. Ohlsen, Danny E. Miller, Gabrielle Brown, Natalie Waligorski, Rebecca Stark +3 more

Characteristics, Genetic Testing, and Diagnoses of Infants with Neonatal Encephalopathy Not Due to Hypoxic Ischemic Encephalopathy: A Cohort Study

The Journal of Pediatrics(2023)10.1016/j.jpeds.2023.113533

N/A

0DataRank · unranked

6 citations

Ulrike Mietzsch, Thomas R. Wood, Katharine Press Callahan, Elliott Mark Weiss, Danny E. Miller +7 more

CLN2 disease resulting from a novel homozygous deep intronic splice variant in TPP1 discovered using long-read sequencing

Molecular Genetics and Metabolism(2023)10.1016/j.ymgme.2023.107713

N/A

0DataRank · unranked

2 citations

Jill Borsuk, John Pappas, Miranda Galey, Anna Scott, Joseph M. Devaney +3 more

Danny E. Miller

Indexed papers

Top data-sharing exemplar

Papers