Colleen E. Clancy

Also affiliated with University of California Davis Medical Center, University of California, Davis

MedicineBiochemistry, Genetics and Molecular BiologyNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 43 papers. Top paper: “Research Opportunities in Autonomic Neural Mechanisms of Cardiopulmonary Regulation”.

Research Opportunities in Autonomic Neural Mechanisms of Cardiopulmonary Regulation

JACC Basic to Translational Science(2022)10.1016/j.jacbts.2021.11.003

N/A

0.596DataRank · unranked

52 citations

Olga Tjurmina, Olujimi A. Ajijola, Rishi Arora, Donald C. Bolser, Mark W. Chapleau +24 more

Harnessing AlphaFold to reveal hERG channel conformational state secrets

eLife(2024)10.7554/elife.104901

N/A

0.406DataRank · unranked

9 citations

Pei‐Chi Yang, Vladimir Yarov‐Yarovoy, Colleen E. Clancy, Igor Vorobyov, Khoa Ngo

Elucidating molecular mechanisms of protoxin-II state-specific binding to the human NaV1.7 channel

The Journal of General Physiology(2023)10.1085/jgp.202313368

N/A

0.382DataRank · unranked

10 citations

Diego López Mateos, Yanxiao Han, Kyle C. Rouen, Surl-Hee Ahn, Heike Wulff +4 more

Structural modeling of hERG channel–drug interactions using Rosetta

Frontiers in Pharmacology(2023)10.3389/fphar.2023.1244166

N/A

0.299DataRank · unranked

5 citations

Kevin R. DeMarco, Kazuharu Furutani, Slava Bekker, Jon T. Sack, Heike Wulff +4 more

Ligand Dissociation Pathways from Membrane Receptors Revealed by Weighted Ensemble Simulations

The Journal of Physical Chemistry B(2025)10.1021/acs.jpcb.5c04545

N/A

0.208DataRank · unranked

3 citations

Kyle C. Rouen, Vladimir Yarov‐Yarovoy, Colleen E. Clancy, Yang K. Xiang, Igor Vorobyov +2 more

Harnessing AlphaFold to reveal hERG channel conformational state secrets

(2024)10.1101/2024.01.27.577468

N/A

0.182DataRank · unranked

2 citations

Pei‐Chi Yang, Vladimir Yarov‐Yarovoy, Colleen E. Clancy, Igor Vorobyov, Khoa Ngo

Modeling Stereospecific Drug Interactions with Beta-Adrenergic Receptors

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.01.560334

N/A

0.104DataRank · unranked

1 citations

Kevin R. DeMarco, Yanxiao Han, Slava Bekker, Colleen E. Clancy, Vladimir Yarov‐Yarovoy +2 more

Mechanisms of cAMP compartmentation in cardiac myocytes: experimental and computational approaches to understanding

The Journal of Physiology(2021)10.1113/jp280801

N/A

0DataRank · unranked

24 citations

Colleen E. Clancy, Robert D. Harvey

A deep learning algorithm to translate and classify cardiac electrophysiology

eLife(2021)10.7554/elife.68335

N/A

0DataRank · unranked

30 citations

Pei‐Chi Yang, Divya C. Kernik, K. Sakamoto, Yasunari Kanda, Junko Kurokawa +3 more

Molecular determinants of pro-arrhythmia proclivity of d- and l-sotalol via a multi-scale modeling pipeline

Journal of Molecular and Cellular Cardiology(2021)10.1016/j.yjmcc.2021.05.015

N/A

0DataRank · unranked

24 citations

Pei‐Chi Yang, Vikrant Singh, Kazuharu Furutani, John R.D. Dawson, Mao-Tsuen Jeng +10 more

Dynamics of adrenergic signaling in cardiac myocytes and implications for pharmacological treatment

Journal of Theoretical Biology(2021)10.1016/j.jtbi.2021.110619

N/A

0DataRank · unranked

19 citations

Colleen E. Clancy, Timothy J. Lewis, Emily E. Meyer

Mechanisms of flecainide induced negative inotropy: An in silico study

Journal of Molecular and Cellular Cardiology(2021)10.1016/j.yjmcc.2021.05.007

N/A

0DataRank · unranked

9 citations

Wayne R. Giles, Luiz Belardinelli, Colleen E. Clancy, Pei‐Chi Yang

Rate-dependent effects of lidocaine on cardiac dynamics: Development and analysis of a low-dimensional drug-channel interaction model

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009145

N/A

0DataRank · unranked

4 citations

Colleen E. Clancy, Timothy J. Lewis, Steffen S. Docken

Structural modeling of the hERG potassium channel and associated drug interactions

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.08.451699

N/A

0DataRank · unranked

1 citations

Aiyana M. Emigh, Kevin R. DeMarco, Kazuharu Furutani, Jon T. Sack, Colleen E. Clancy +3 more

Biological noise is a key determinant of the reproducibility and adaptability of cardiac pacemaking and EC coupling

The Journal of General Physiology(2022)10.1085/jgp.202012613

N/A

0DataRank · unranked

32 citations

Ariana Neelufar Moghbel, Mohammad S. Pourhosseinzadeh, Robert H. Cudmore, Daisuke Sato, Colleen E. Clancy +2 more

Structural modeling of the hERG potassium channel and associated drug interactions

Frontiers in Pharmacology(2022)10.3389/fphar.2022.966463

N/A

0DataRank · unranked

23 citations

Aiyana M. Emigh, Kevin R. DeMarco, Kazuharu Furutani, Jon T. Sack, Colleen E. Clancy +3 more

Elucidation of a dynamic interplay between a beta-2 adrenergic receptor, its agonist, and stimulatory G protein

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2215916120

N/A

0DataRank · unranked

25 citations

John R.D. Dawson, Kevin R. DeMarco, Kyle C. Rouen, Slava Bekker, Vladimir Yarov‐Yarovoy +4 more

Toward Digital Twin Technology for Precision Pharmacology

JACC. Clinical electrophysiology(2023)10.1016/j.jacep.2023.10.024

N/A

0DataRank · unranked

21 citations

Mao-Tsuen Jeng, Vladimir Yarov‐Yarovoy, Luis F. Santana, Igor Vorobyov, Colleen E. Clancy +1 more

A multiscale predictive digital twin for neurocardiac modulation

The Journal of Physiology(2023)10.1113/jp284391

N/A

0DataRank · unranked

23 citations

Adam J. Rose, Kevin R. DeMarco, John R.D. Dawson, Yanxiao Han, Mao-Tsuen Jeng +7 more

The formation of KV2.1 macro-clusters is required for sex-specific differences in L-type CaV1.2 clustering and function in arterial myocytes

Communications Biology(2023)10.1038/s42003-023-05527-1

N/A

0DataRank · unranked

15 citations

Samantha C. O’Dwyer, Declan Manning, Gonzalo Hernandez-Hernandez, Paula Rhana, Zhihui Fong +6 more

A computational model predicts sex-specific responses to calcium channel blockers in mammalian mesenteric vascular smooth muscle

eLife(2023)10.7554/elife.90604

N/A

0DataRank · unranked

12 citations

Samantha C. O’Dwyer, Pei‐Chi Yang, Collin Matsumoto, Mindy Tieu, Zhihui Fong +4 more

The formation of KV2.1 macro-clusters is required for sex-specific differences in L-type CaV1.2 clustering and function in arterial myocytes

Research Square(2023)10.21203/rs.3.rs-3136085/v1

N/A

0DataRank · unranked

3 citations

Collin Matsumoto, Samantha C. O’Dwyer, Declan Manning, Gonzalo Hernandez-Hernandez, Paula Rhana +6 more

Elucidating Molecular Mechanisms of Protoxin-2 State-specific Binding to the Human Na V 1.7 Channel

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.27.530360

N/A

0DataRank · unranked

1 citations

Diego López Mateos, Yanxiao Han, Kyle C. Rouen, Surl-Hee Ahn, Heike Wulff +4 more

A computational model predicts sex-specific responses to calcium channel blockers in mammalian mesenteric vascular smooth muscle

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.24.546394

N/A

0DataRank · unranked

1 citations

Samantha C. O’Dwyer, Collin Matsumoto, Mindy Tieu, Zhihui Fong, Pei‐Chi Yang +4 more

The formation of K V 2.1 macro-clusters is required for sex-specific differences in L-type Ca V 1.2 clustering and function in arterial myocytes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.27.546725

N/A

0DataRank · unranked

0 citations

Samantha C. O’Dwyer, Declan Manning, Gonzalo Hernandez-Hernandez, Paula Rhana, Zhihui Fong +6 more

Reviewer #3 (Public Review): A computational model predicts sex-specific responses to calcium channel blockers in mesenteric vascular smooth muscle

(2023)10.7554/elife.90604.1.sa0

N/A

0DataRank · unranked

0 citations

Samantha C. O’Dwyer, Collin Matsumoto, Mindy Tieu, Zhihui Fong, Pei‐Chi Yang +4 more

Reviewer #2 (Public Review): A computational model predicts sex-specific responses to calcium channel blockers in mesenteric vascular smooth muscle

(2023)10.7554/elife.90604.1.sa1

N/A

0DataRank · unranked

0 citations

Samantha C. O’Dwyer, Collin Matsumoto, Mindy Tieu, Zhihui Fong, Pei‐Chi Yang +4 more

A computational model predicts sex-specific responses to calcium channel blockers in mesenteric vascular smooth muscle

(2023)10.7554/elife.90604.1

N/A

0DataRank · unranked

0 citations

Samantha C. O’Dwyer, Collin Matsumoto, Mindy Tieu, Zhihui Fong, Pei‐Chi Yang +4 more

Reviewer #2 (Public Review): A computational model predicts sex-specific responses to calcium channel blockers in mesenteric vascular smooth muscle

(2023)10.7554/elife.90604.2.sa1

N/A

0DataRank · unranked

0 citations

Samantha C. O’Dwyer, Collin Matsumoto, Mindy Tieu, Zhihui Fong, Pei‐Chi Yang +4 more

A computational model predicts sex-specific responses to calcium channel blockers in mesenteric vascular smooth muscle

(2023)10.7554/elife.90604.2

N/A

0DataRank · unranked

0 citations

Samantha C. O’Dwyer, Collin Matsumoto, Mindy Tieu, Zhihui Fong, Pei‐Chi Yang +4 more

Advances in induced pluripotent stem cell‐derived cardiac myocytes: technological breakthroughs, key discoveries and new applications

The Journal of Physiology(2024)10.1113/jp282562

N/A

0DataRank · unranked

19 citations

Luis F. Santana, Colleen E. Clancy

Mechanisms of Chemical Atrial Defibrillation by Flecainide and Ibutilide

JACC. Clinical electrophysiology(2024)10.1016/j.jacep.2024.08.009

N/A

0DataRank · unranked

4 citations

Luiz Belardinelli, Colleen E. Clancy, Pei‐Chi Yang

A computational model predicts sex-specific responses to calcium channel blockers in mammalian mesenteric vascular smooth muscle

eLife(2024)10.7554/elife.90604.3

N/A

0DataRank · unranked

1 citations

Samantha C. O’Dwyer, Pei‐Chi Yang, Collin Matsumoto, Mindy Tieu, Zhihui Fong +4 more

Author response: Harnessing AlphaFold to reveal hERG channel conformational state secrets

(2024)10.7554/elife.104901.1.sa4

N/A

0DataRank · unranked

0 citations

Pei‐Chi Yang, Vladimir Yarov‐Yarovoy, Colleen E. Clancy, Igor Vorobyov, Khoa Ngo

Molecular simulations reveal intricate coupling between agonist-bound β-adrenergic receptors and G protein

iScience(2025)10.1016/j.isci.2024.111741

N/A

0DataRank · unranked

5 citations

John R.D. Dawson, Kevin R. DeMarco, Kyle C. Rouen, Khoa Ngo, Slava Bekker +6 more

A Computational Pipeline to Predict Cardiotoxicity

Circulation Research(2020)10.1161/circresaha.119.316404

N/A

0DataRank · unranked

84 citations

Kevin R. DeMarco, Parya Aghasafari, Mao-Tsuen Jeng, John R.D. Dawson, Slava Bekker +5 more

Harnessing AlphaFold to reveal hERG channel conformational state secrets

eLife(2025)10.7554/elife.104901.3

N/A

0DataRank · unranked

0 citations

Pei‐Chi Yang, Vladimir Yarov‐Yarovoy, Colleen E. Clancy, Igor Vorobyov, Khoa Ngo

When Does the IC50 Accurately Assess the Blocking Potency of a Drug?

Journal of Chemical Information and Modeling(2020)10.1021/acs.jcim.9b01085

N/A

0DataRank · unranked

61 citations

Brandon M. Brown, Jordi Cano, Beatriz Trénor, Pei‐Chi Yang, Javier Sáiz +3 more

Selectivity filter modalities and rapid inactivation of the hERG1 channel

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1909196117

N/A

0DataRank · unranked

52 citations

Kevin R. DeMarco, Jiqing Guo, Henry J. Duff, Igor Vorobyov, Colleen E. Clancy +2 more

A computational model of induced pluripotent stem-cell derived cardiomyocytes for high throughput risk stratification of KCNQ1 genetic variants

PLoS Computational Biology(2020)10.1371/journal.pcbi.1008109

N/A

0DataRank · unranked

32 citations

Pei‐Chi Yang, Junko Kurokawa, Joseph C. Wu, Colleen E. Clancy, Divya C. Kernik

Evolving Discovery of the Origin of the Heartbeat

JACC. Clinical electrophysiology(2020)10.1016/j.jacep.2020.07.002

N/A

0DataRank · unranked

32 citations

Luis F. Santana, Colleen E. Clancy

Sex-specific classification of drug-induced Torsade de Pointes susceptibility using cardiac simulations and machine learning

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.26.352740

N/A

0DataRank · unranked

6 citations

Haibo Ni, Sicheng Zhu, Xianwei Zhang, Raffaele Coppini, Pei‐Chi Yang +6 more

Sex‐Specific Classification of Drug‐Induced Torsade de Pointes Susceptibility Using Cardiac Simulations and Machine Learning

Clinical Pharmacology & Therapeutics(2021)10.1002/cpt.2240

N/A

0DataRank · unranked

65 citations

Haibo Ni, Sicheng Zhu, Xianwei Zhang, Raffaele Coppini, Pei‐Chi Yang +6 more