Henry W. Long

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 55 papers. Top paper: “Landscape of prostate-specific membrane antigen heterogeneity and regulation in AR-positive and AR-negative metastatic prostate cancer”.

Landscape of prostate-specific membrane antigen heterogeneity and regulation in AR-positive and AR-negative metastatic prostate cancer

Nature Cancer(2023)10.1038/s43018-023-00539-6

N/A

3.3DataRank · unranked

113 citations

Yasutaka Yamada, Sheng-Yu Ku, Varadha Balaji Venkadakrishnan, Joshua A. Korsen, Teja Kalidindi +15 more

Subtype heterogeneity and epigenetic convergence in neuroendocrine prostate cancer

Nature Communications(2021)10.1038/s41467-021-26042-z

N/A

2.9DataRank · unranked

163 citations

Yingtian Xie, Alba Font‐Tello, Klothilda Lim, Sudeepa Syamala, Xintao Qiu +33 more

Treatment-Induced Tumor Dormancy through YAP-Mediated Transcriptional Reprogramming of the Apoptotic Pathway

Cancer Cell(2020)10.1016/j.ccell.2019.12.006

N/A

0.925DataRank · unranked

477 citations

Yao Liu, Ciric To, Tinghu Zhang, Mengyang Fan, Amir Vajdi +39 more

Therapeutically Increasing MHC-I Expression Potentiates Immune Checkpoint Blockade

Cancer Discovery(2021)10.1158/2159-8290.cd-20-0812

N/A

0.848DataRank · unranked

284 citations

Wubing Zhang, Xiaoqing Wang, Peng Jiang, Nicole Traugh, Ziyi Li +28 more

MYC drives aggressive prostate cancer by disrupting transcriptional pause release at androgen receptor targets

Nature Communications(2022)10.1038/s41467-022-30257-z

N/A

0.762DataRank · unranked

160 citations

Nadia Boufaied, Tarek Hallal, Avery Feit, Anna de Polo, Adrienne Luoma +30 more

Liquid biopsy epigenomic profiling for cancer subtyping

Nature Medicine(2023)10.1038/s41591-023-02605-z

N/A

0.722DataRank · unranked

122 citations

Ji-Heui Seo, Matthew P. Davidsohn, Brad Fortunato, Karl Semaan, Shahabbedin Sotudian +38 more

An Enhancer-Driven Stem Cell–Like Program Mediated by SOX9 Blocks Intestinal Differentiation in Colorectal Cancer

Gastroenterology(2021)10.1053/j.gastro.2021.09.044

N/A

0.648DataRank · unranked

74 citations

Gina N. Duronio, Yaying Yang, Pratyusha Bala, Prajna Hebbar, Sándor Spisák +9 more

Endocrine Therapy Synergizes with SMAC Mimetics to Potentiate Antigen Presentation and Tumor Regression in Hormone Receptor–Positive Breast Cancer

Cancer Research(2023)10.1158/0008-5472.can-23-1711

N/A

0.596DataRank · unranked

15 citations

Yingtian Xie, Shira Sherman, Zsuzsanna Nagy, Douglas Russo, Tara Akhshi +36 more

BCOR and BCORL1 Mutations Drive Epigenetic Reprogramming and Oncogenic Signaling by Unlinking PRC1.1 from Target Genes

Blood Cancer Discovery(2021)10.1158/2643-3230.bcd-21-0115

N/A

0.564DataRank · unranked

42 citations

Helen C. Wang, Hannah Q. Karp, Clifford A. Meyer, Paloma Cejas, Micah D. Gearhart +22 more

Clonal tracing reveals diverse patterns of response to immune checkpoint blockade

Genome biology(2020)10.1186/s13059-020-02166-1

N/A

0.524DataRank · unranked

32 citations

Xiaoqing Wang, Xihao Hu, Peng Jiang, Ziyi Li, Nicole Traugh +21 more

FOXR2 Is an Epigenetically Regulated Pan-Cancer Oncogene That Activates ETS Transcriptional Circuits

Cancer Research(2022)10.1158/0008-5472.can-22-0671

N/A

0.477DataRank · unranked

23 citations

Paloma Cejas, Dayle K. Wang, Smruti Patel, David W. Wu, Phonepasong Arounleut +44 more

Increased nuclear factor I-mediated chromatin access drives transition to androgen receptor splice variant dependence in prostate cancer

Cell Reports(2024)10.1016/j.celrep.2024.115089

N/A

0.455DataRank · unranked

12 citations

Mannan Nouri, Jiaqian Liang, Shaoyong Chen, Andreas Varkaris, Betul Ersoy-Fazlioglu +15 more

ZBTB7A is a modulator of KDM5-driven transcriptional networks in basal breast cancer

Cell Reports(2024)10.1016/j.celrep.2024.114991

N/A

0.362DataRank · unranked

9 citations

Marco Seehawer, Zheqi Li, Andriana Patmanidis, Triet M. Bui, Pierre Foidart +19 more

700 Increasing MHC-I expression to potentiate immune checkpoint blockade therapy

Regular and Young Investigator Award Abstracts(2021)10.1136/jitc-2021-sitc2021.700

N/A

0.104DataRank · unranked

1 citations

Wubing Zhang, Xiaoqing Wang, Peng Jiang, Nicole Traugh, Ziyi Li +28 more

Pan-ERBB kinase inhibition augments CDK4/6 inhibitor efficacy in oesophageal squamous cell carcinoma

Gut(2021)10.1136/gutjnl-2020-323276

N/A

0DataRank · unranked

41 citations

Zhong Wu, Zhouwei Zhang, Louisa B. Goss, James M. McFarland, Ankur K. Nagaraja +13 more

CoBRA: Containerized Bioinformatics Workflow for Reproducible ChIP/ATAC-Seq Analysis

Genomics Proteomics & Bioinformatics(2021)10.1016/j.gpb.2020.11.007

N/A

0DataRank · unranked

39 citations

Avery Feit, Ariel Feiglin, Yingtian Xie, Nikolas Kesten, Len Taing +10 more

BCOR and BCORL1 mutations disrupt PRC1.1 repressive function in leukemia by unlinking the RING-PCGF1 enzymatic core from target genes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.08.433705

N/A

0DataRank · unranked

0 citations

Helen C. Wang, Clifford A. Meyer, Paloma Cejas, Micah D. Gearhart, Emmalee R. Adelman +21 more

CHIPS: A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.09.434676

N/A

0DataRank · unranked

0 citations

Clara C. Cousins, Gali Bai, Paloma Cejas, Xintao Qiu, Zachary T. Herbert +6 more

p16INK4A-deficiency predicts response to combined HER2 and CDK4/6 inhibition in HER2+ breast cancer brain metastases

Nature Communications(2022)10.1038/s41467-022-29081-2

N/A

0DataRank · unranked

22 citations

Sheheryar Kabraji, Shaozhen Xie, Yanzhi Wang, Peichen Pan, Xiaofang He +9 more

YAP1 and PRDM14 converge to promote cell survival and tumorigenesis

Developmental Cell(2022)10.1016/j.devcel.2021.12.006

N/A

0DataRank · unranked

20 citations

Seav Huong Ly, Yingtian Xie, Gina N. Duronio, Dane Ford-Roshon, Justin H. Hwang +12 more

Response to supraphysiological testosterone is predicted by a distinct androgen receptor cistrome

JCI Insight(2022)10.1172/jci.insight.157164

N/A

0DataRank · unranked

19 citations

Lisha G. Brown, Jennifer L. Conner, Holly M. Nguyen, Nadia Boufaied, Sarah Abou Alaiwi +15 more

Distinct oncogenic signatures in malignant PEComa and leiomyosarcoma identified by integrative RNA-seq and H3K27ac ChIP-seq analysis.

Journal of Clinical Oncology(2022)10.1200/jco.2022.40.16_suppl.11552

N/A

0DataRank · unranked

2 citations

Ahmad-Abdel Azim, Elio Adib, Inga‐Marie Schaefer, Nikolas Kesten, Len Taing +8 more

A nuclear receptor facilitates differentiation of human PSCs into more mature hepatocytes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.24.485641

N/A

0DataRank · unranked

1 citations

Esmée de Zwaan, Yang Guo, Paloma Cejas, Prathapan Thiru, Martijn van de Bunt +12 more

A Distinct Chromatin State Drives Therapeutic Resistance in Invasive Lobular Breast Cancer

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.29.486217

N/A

0DataRank · unranked

1 citations

Xintao Qiu, Ariel Feiglin, Xiaoyong Fu, Sándor Spisák, Avery Feit +20 more

KDM6A epigenetically regulates subtype plasticity in small cell lung cancer

Nature Cell Biology(2023)10.1038/s41556-023-01210-z

N/A

0DataRank · unranked

69 citations

Yixiang Li, Matthew A. Booker, Yingtian Xie, Sarah Naomi Olsen, Radhika A. Patel +19 more

Heterogeneity and transcriptional drivers of triple-negative breast cancer

Cell Reports(2023)10.1016/j.celrep.2023.113564

N/A

0DataRank · unranked

29 citations

Daniel Temko, Laura E. Stevens, Marco Seehawer, Anne Fassl, Katherine C. Murphy +33 more

Data from FOXR2 Is an Epigenetically Regulated Pan-Cancer Oncogene That Activates ETS Transcriptional Circuits

(2023)10.1158/0008-5472.c.6514136.v1

N/A

0DataRank · unranked

0 citations

Paloma Cejas, Dayle K. Wang, Smruti Patel, David W. Wu, Phonepasong Arounleut +44 more

Mammalian SWI/SNF complex activity regulates POU2F3 and constitutes a targetable dependency in small cell lung cancer

Cancer Cell(2024)10.1016/j.ccell.2024.06.012

N/A

0DataRank · unranked

48 citations

Kevin Kam Fung So, Alexander W. Ying, Shreoshi Pal Choudhuri, Xinyue Li, Grace D. Xu +24 more

Midkine as a driver of age-related changes and increase in mammary tumorigenesis

Cancer Cell(2024)10.1016/j.ccell.2024.09.002

N/A

0DataRank · unranked

41 citations

Ernesto Rojas Jiménez, Zheqi Li, Triet M. Bui, Marco Seehawer, Jun Nishida +8 more

Detecting Small Cell Transformation in Patients with Advanced EGFR Mutant Lung Adenocarcinoma through Epigenomic cfDNA Profiling

Clinical Cancer Research(2024)10.1158/1078-0432.ccr-24-0466

N/A

0DataRank · unranked

32 citations

Catherine B. Meador, Xintao Qiu, Ji-Heui Seo, Matthew P. Davidsohn, Hunter Savignano +20 more

Transcription factor dynamics, oscillation, and functions in human enteroendocrine cell differentiation

Cell stem cell(2024)10.1016/j.stem.2024.04.015

N/A

0DataRank · unranked

19 citations

Wei Yong Gu, Shariq Madha, Allen W. Lynch, Paloma Cejas, Ruiyang He +9 more

Transcription factor dynamics, oscillation, and functions in human enteroendocrine cell differentiation

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.09.574746

N/A

0DataRank · unranked

7 citations

Wei Yong Gu, Shariq Madha, Allen W. Lynch, Paloma Cejas, Ruiyang He +9 more

Increased chromatin accessibility mediated by nuclear factor I drives transition to androgen receptor splice variant dependence in castration-resistant prostate cancer

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.10.575110

N/A

0DataRank · unranked

1 citations

Mannan Nouri, Jiaqian Liang, Andreas Varkaris, Betul Ersoy-Fazlioglu, Olga Voznesensky +14 more

HIF regulates multiple translated endogenous retroviruses: Implications for cancer immunotherapy

Cell(2025)10.1016/j.cell.2025.01.046

N/A

0DataRank · unranked

56 citations

David A. Braun, Karl R. Clauser, Vijyendra Ramesh, Nitin H. Shirole, Joseph E. Duke-Cohan +41 more

Patterns of intra- and intertumor phenotypic heterogeneity in lethal prostate cancer

Journal of Clinical Investigation(2025)10.1172/jci186599

N/A

0DataRank · unranked

10 citations

Roman Gulati, Erolcan Sayar, Radhika A. Patel, Micah Tratt, Helen Richards +40 more

Intraindividual epigenetic heterogeneity underlying phenotypic subtypes of advanced prostate cancer

Nature Communications(2025)10.1038/s41467-025-60654-z

N/A

0DataRank · unranked

9 citations

Sheng-Yu Ku, Varadha Balaji Venkadakrishnan, Martin Bakht, Michael Sigouros, Joanna Chan +18 more

Requirement for Cyclin D1 Underlies Cell-Autonomous HIF2 Dependence in Kidney Cancer

Cancer Discovery(2025)10.1158/2159-8290.cd-24-1378

N/A

0DataRank · unranked

6 citations

Devishi Kesar, Yenarae Lee, Amy Goodale, Sudeepa Syamala, Shweta Kukreja +11 more

Distinct transcription factor interactions drive HOXB13 activity in different stages of prostate cancer

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2500327122

N/A

0DataRank · unranked

3 citations

Shreyas Lingadahalli, Umut Berkay Altıntaş, Ahmet Cingöz, Emirhan Tekoglu, Ivan Pak Lok Yu +18 more

Defined cellular reprogramming of androgen receptor-active prostate cancer to neuroendocrine prostate cancer

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.12.637904

N/A

0DataRank · unranked

4 citations

Kai Song, Huiyun Sun, Yong Tao, Arthur Huang, Vipul Bhatia +9 more

Lack of synergy between AR targeted therapies and PARP inhibitors in homologous recombination-proficient prostate cancer

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.02.657429

N/A

0DataRank · unranked

2 citations

Esmé Wheeler, Rong Li, Feng Lü, Buraq Ahmed, Alok K. Tewari +8 more

A multi-omics resource of B cell activation reveals genetic mechanisms for immune-mediated diseases

medRxiv(2025)10.1101/2025.05.22.25328104

N/A

0DataRank · unranked

1 citations

Marcella E. Franco, Nada A. Abdelaziz, Daniela Fernandez‐Salinas, Marcos Chiñas, Mariasilvia Colantuoni +34 more

Transcriptional cyclin-dependent kinases Cdk8 and Cdk19 are required for normal macrophage differentiation

Cell Cycle(2025)10.1080/15384101.2025.2571788

N/A

0DataRank · unranked

0 citations

Samantha Liu, Fabian Strobel, Diego Martínez‐Alonso, Deborah Butter, Konrad Śnioch +7 more

Enhanced Efficacy of Simultaneous PD-1 and PD-L1 Immune Checkpoint Blockade in High-Grade Serous Ovarian Cancer

Cancer Research(2020)10.1158/0008-5472.can-20-1674

N/A

0DataRank · unranked

217 citations

Matthew P. Keany, Han Dong, Linah Al-Alem, Unnati M. Pandya, Suzan Lazo +22 more

Hdac3 is an epigenetic inhibitor of the cytotoxicity program in CD8 T cells

The Journal of Experimental Medicine(2020)10.1084/jem.20191453

N/A

0DataRank · unranked

69 citations

Olamide Olawoyin, Paloma Cejas, Yingtian Xie, Clifford A. Meyer, Yoshinaga Ito +7 more

ERG-Mediated Coregulator Complex Formation Maintains Androgen Receptor Signaling in Prostate Cancer

Cancer Research(2020)10.1158/0008-5472.can-20-2044

N/A

0DataRank · unranked

16 citations

Nikolas Kesten, Alba Font‐Tello, Matthew E.K. Chang, Raga Vadhi, Klothilda Lim +6 more

Universal NicE-seq for high-resolution accessible chromatin profiling for formaldehyde-fixed and FFPE tissues

Clinical Epigenetics(2020)10.1186/s13148-020-00921-6

N/A

0DataRank · unranked

25 citations

Zhiyi Sun, Udayakumar S. Vishnu, Pengying Hao, Paloma Cejas, George Spracklin +5 more

Oncogenic Deregulation of EZH2 as an Opportunity for Targeted Therapy in Lung Cancer

UNC Libraries(2020)10.17615/c0ws-ey78

N/A

0DataRank · unranked

7 citations

Julián Carretero, Roderick T. Bronson, James E. Bradner, Charles Y. Lin, Myles Brown +26 more

Subtype Heterogeneity and Epigenetic Convergence in Neuroendocrine Prostate Cancer

(2020)10.1101/2020.09.13.291328

N/A

0DataRank · unranked

21 citations

Yingtian Xie, Alba Font‐Tello, Klothilda Lim, Sudeepa Syamala, Xintao Qiu +30 more

DNA methylation is a key mechanism for maintaining monoallelic expression on autosomes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.20.954834

N/A

0DataRank · unranked

10 citations

Denis L. J. Lafontaine, Sébastien Vigneau, С. В. Виноградова, Asia Mendelevich, Kyomi J. Igarashi +10 more

CoBRA: Containerized Bioinformatics workflow for Reproducible ChIP/ATAC-seq Analysis - from differential peak calling to pathway analysis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.06.367409

N/A

0DataRank · unranked

4 citations

Avery Feit, Ariel Feiglin, Yingtian Xie, Nikolas Kesten, Len Taing +10 more

In Vivo CRISPR Screens Identify E3 Ligase Cop1 as a Modulator of Macrophage Infiltration and Cancer Immunotherapy Target

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.09.418012

N/A

0DataRank · unranked

1 citations

Collin Tokheim, Binbin Wang, Shengqing Gu, Qin Tang, Yihao Li +16 more

EZH2 inhibition activates a dsRNA–STING–interferon stress axis that potentiates response to PD-1 checkpoint blockade in prostate cancer

Nature Cancer(2021)10.1038/s43018-021-00185-w

N/A

0DataRank · unranked

241 citations

Anjali V. Sheahan, Deborah L. Burkhart, Sylvan C. Baca, Nadia Boufaied, Yin Liu +32 more

In vivo CRISPR screens identify the E3 ligase Cop1 as a modulator of macrophage infiltration and cancer immunotherapy target

Cell(2021)10.1016/j.cell.2021.09.006

N/A

0DataRank · unranked

198 citations

Collin Tokheim, Shengqing Gu, Binbin Wang, Qin Tang, Yihao Li +17 more

Reprogramming of the FOXA1 cistrome in treatment-emergent neuroendocrine prostate cancer

Nature Communications(2021)10.1038/s41467-021-22139-7

N/A

0DataRank · unranked

171 citations

David Y. Takeda, Ji-Heui Seo, Justin H. Hwang, Sheng-Yu Ku, Rand Arafeh +36 more

Inhibition of CDK4/6 Promotes CD8 T-cell Memory Formation

Cancer Discovery(2021)10.1158/2159-8290.cd-20-1540

N/A

0DataRank · unranked

125 citations

Lestat R. Ali, Eleanor Clancy-Thompson, Li Qiang, Katherine S. Ventre, Patrick Lenehan +19 more