Robin D. Dowell

Also affiliated with University of Colorado System

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.2Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Just 2% of SARS-CoV-2-positive individuals carry 90% of the virus circulating in communities

medRxiv(2021)10.1101/2021.03.01.21252250

Top 17%

1.2DataRank

Top 17%35 citations

Tassa Saldi, Erika Lasda, Carolyn J. Decker, Camille L. Paige, Denise Muhlrad +20 more

Papers

Driven by 50 papers — median percentile 83. Top paper: “Nuclear mechanosensing drives chromatin remodelling in persistently activated fibroblasts”.

Nuclear mechanosensing drives chromatin remodelling in persistently activated fibroblasts

Nature Biomedical Engineering(2021)10.1038/s41551-021-00709-w

N/A

3.6DataRank · unranked

172 citations

Claudia Crocini, Daniel Ramirez, Anouk R. Killaars, Joseph C. Grim, Brian A. Aguado +6 more

Just 2% of SARS-CoV-2-positive individuals carry 90% of the virus circulating in communities

medRxiv(2021)10.1101/2021.03.01.21252250

Top 17%

1.2DataRank

Top 17%35 citations

Tassa Saldi, Erika Lasda, Carolyn J. Decker, Camille L. Paige, Denise Muhlrad +20 more

Tissue-specific transcriptional regulation has diverged significantly between human and mouse

Nature Genetics(2007)10.1038/ng2047

N/A

0.940DataRank · unranked

526 citations

Robin D. Dowell, Elizabeth S Jacobsen, William Gordon, Timothy W. Danford, Kenzie D. Macisaac +7 more

Competition between PRC2.1 and 2.2 subcomplexes regulates PRC2 chromatin occupancy in human stem cells

Molecular Cell(2020)10.1016/j.molcel.2020.11.044

N/A

0.631DataRank · unranked

66 citations

Anne R. Gooding, Robin D. Dowell, Thomas R. Cech, Daniel T. Youmans

Extracellular matrix stiffness controls cardiac valve myofibroblast activation through epigenetic remodeling

Bioengineering & Translational Medicine(2022)10.1002/btm2.10394

N/A

0.568DataRank · unranked

43 citations

Dilara Batan, Carrie Bishop, Daniel Ramirez, Brian A. Aguado, Megan E. Schroeder +10 more

An intronic LINE-1 regulates IFNAR1 expression in human immune cells

Mobile DNA(2023)10.1186/s13100-023-00308-3

N/A

0.494DataRank · unranked

26 citations

Daniel Ramirez, Robin D. Dowell, Edward B. Chuong, Carmen A. Buttler

The temporal dynamics of lncRNA Firre-mediated epigenetic and transcriptional regulation

Nature Communications(2024)10.1038/s41467-024-50402-0

N/A

0.477DataRank · unranked

23 citations

Erika Lasda, Isabela Tiemy Pereira, Tenaya K. Vallery, Daniel Ramirez, Jordan P. Lewandowski +4 more

The Δ40p53 isoform inhibits p53-dependent eRNA transcription and enables regulation by signal-specific transcription factors during p53 activation

PLoS Biology(2021)10.1371/journal.pbio.3001364

N/A

0.464DataRank · unranked

21 citations

Taylor Jones, Margaret Gruca, Sivapriya Ramamoorthy, Robin D. Dowell, Dylan J. Taatjes +1 more

Macrophages derived from human induced pluripotent stem cells (iPSCs) serve as a high-fidelity cellular model for investigating HIV-1, dengue, and influenza viruses

Journal of Virology(2024)10.1128/jvi.01563-23

N/A

0.419DataRank · unranked

12 citations

Arturo Barbachano-Guerrero, Laurence M. Fairchild, Teisha J. Rowland, Robin D. Dowell, Mary Allen +3 more

Cellular zinc status alters chromatin accessibility and binding of p53 to DNA

Life Science Alliance(2024)10.26508/lsa.202402638

N/A

0.387DataRank · unranked

10 citations

Leah J. Damon, Lynn Sanford, Samuel E. Holtzen, Taylor Jones, Mary Allen +3 more

Suppression of p53 response by targeting p53-Mediator binding with a stapled peptide

Cell Reports(2022)10.1016/j.celrep.2022.110630

N/A

0.385DataRank · unranked

12 citations

Kim Quach, Taylor Jones, Cecilia B. Levandowski, Christopher C. Ebmeier, Jonathan D. Rubin +5 more

LIET model: capturing the kinetics of RNA polymerase from loading to termination

Nucleic Acids Research(2025)10.1093/nar/gkaf246

N/A

0.241DataRank · unranked

4 citations

Georgia E F Barone, Hope A. Townsend, Rutendo F. Sigauke, Mary Allen, Robin D. Dowell +1 more

TF Profiler: a transcription factor inference method that broadly measures transcription factor activity and identifies mechanistically distinct networks

Genome biology(2025)10.1186/s13059-025-03545-2

N/A

0.241DataRank · unranked

4 citations

Rutendo F. Sigauke, Lynn Sanford, Dylan J. Taatjes, Mary Allen, Robin D. Dowell +1 more

Atlas of nascent RNA transcripts reveals tissue-specific enhancer to gene linkages

BMC Genomics(2025)10.1186/s12864-025-11568-z

N/A

0.241DataRank · unranked

4 citations

Lynn Sanford, Zachary L. Maas, Taylor Jones, Jacob T. Stanley, Hope A. Townsend +3 more

Genomics-based deconvolution of multiplexed transcriptional responses to wood smoke particles defines rapid AHR signaling dynamics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.23.432311

N/A

0.175DataRank · unranked

2 citations

Sarah K. Sasse, Margaret Gruca, Lynn Sanford, Robin D. Dowell, Anthony N. Gerber +1 more

Human mRNA in saliva can correctly identify individuals harboring acute infection

mBio(2023)10.1128/mbio.01712-23

N/A

0.165DataRank · unranked

2 citations

Nicholas R. Meyerson, Camille L. Paige, James H. Morrison, Stephen K. Clark, Will T. Fattor +10 more

Mediator kinase inhibition suppresses hyperactive interferon signaling in Down syndrome

eLife(2024)10.7554/elife.100197

N/A

0.165DataRank · unranked

2 citations

Lynn Sanford, Samuel S. Hunter, Kayla Molison, Benjamin Erickson, Meaghan CS Courvan +9 more

Infection of immune competent macrophages expressing functional Slc11a1 alters global gene expression, regulation of metal ions, and infection outcomes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.18.436026

N/A

0.104DataRank · unranked

1 citations

Michael Minson, Mary A. Allen, Robin D. Dowell, Amy E. Palmer, Lara N. Janiszewski

Atlas of nascent RNA transcripts reveals enhancer to gene linkages

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.07.570626

N/A

0DataRank · unranked

8 citations

Lynn Sanford, Zachary L. Maas, Taylor Jones, Jacob T. Stanley, Hope A. Townsend +3 more

Rapid PTEFb-dependent transcriptional reorganization underpins the glioma adaptive response to radiotherapy

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.24.525424

N/A

0DataRank · unranked

1 citations

Lays Martin Sobral, Etienne Danis, Bridget Sanford, Ilango Balakrishnan, Dong Wang +9 more

Transcription dosage compensation does not occur in Down syndrome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.07.543933

N/A

0DataRank · unranked

1 citations

Robin D. Dowell, Josephina Hendrix, Justin Freeman, Mary A. Allen, Samuel S. Hunter

Mediator kinase inhibition suppresses hyperactive interferon signaling in Down syndrome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.05.547813

N/A

0DataRank · unranked

1 citations

Lynn Sanford, Samuel S. Hunter, Kayla Molison, Benjamin Erickson, Meaghan CS Courvan +9 more

Cellular zinc status alters chromatin accessibility and binding of transcription factor p53 to genomic sites

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.20.567954

N/A

0DataRank · unranked

1 citations

Daniel Ocampo, Lynn Sanford, Taylor Jones, Mary A. Allen, Robin D. Dowell +2 more

Nascent transcription upon interferon-α2 stimulation on human and rhesus macaque lymphoblastoid cell lines

BMC Research Notes(2023)10.1186/s13104-023-06465-1

N/A

0DataRank · unranked

0 citations

Edward B. Chuong, Robin D. Dowell, Daniel Ramirez

Rapid P-TEFb-dependent transcriptional reorganization underpins the glioma adaptive response to radiotherapy

Nature Communications(2024)10.1038/s41467-024-48214-3

N/A

0DataRank · unranked

7 citations

Lays Martin Sobral, Etienne Danis, Bridget Sanford, Sahiti Donthula, Ilango Balakrishnan +11 more

Internal and external normalization of nascent RNA sequencing run-on experiments

BMC Bioinformatics(2024)10.1186/s12859-023-05607-3

N/A

0DataRank · unranked

4 citations

Robin D. Dowell, Zachary L. Maas

A transcription factor (TF) inference method that broadly measures TF activity and identifies mechanistically distinct TF networks

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.15.585303

N/A

0DataRank · unranked

6 citations

Rutendo F. Sigauke, Lynn Sanford, Dylan J. Taatjes, Mary A. Allen, Robin D. Dowell +1 more

Single nucleus RNA-sequencing reveals transcriptional synchrony across different relationships

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.27.587112

N/A

0DataRank · unranked

6 citations

Julie M. Sadino, Allison C. Fultz, Michael A. Kelberman, Robin D. Dowell, Mary Allen +2 more

LIET Model: Capturing the kinetics of RNA polymerase from loading to termination

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.03.616401

N/A

0DataRank · unranked

0 citations

G. Barone, Hope A. Townsend, Rutendo F. Sigauke, Mary A. Allen, Robin D. Dowell +1 more

Multi-omics and biochemical reconstitution reveal CDK7-dependent mechanisms controlling RNA polymerase II function at gene 5′- and 3′ ends

Cell Reports(2025)10.1016/j.celrep.2025.115904

N/A

0DataRank · unranked

5 citations

Lynn Sanford, Jessica Rodino, Michael Nagel, Taylor Jones, Jenna K. Rimel +13 more

Multi-omics and biochemical reconstitution reveal CDK7-dependent mechanisms controlling RNA polymerase II function at gene 5’- and 3’-ends

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.08.632016

N/A

0DataRank · unranked

0 citations

Lynn Sanford, Jessica Rodino, Michael Nagel, Taylor Jones, Jenna K. Rimel +12 more

Fragile nucleosomes are essential for RNA Polymerase II to transcribe in eukaryotes

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.08.681188

N/A

0DataRank · unranked

0 citations

Samuel S. Hunter, Sonia M. Leach, Yonghua Zhuang, Haolin Liu, Jun‐Feng Gao +6 more

Base Composition Influences the Position and Precision of RNA Polymerase II Disassociation in Basal and Perturbed Conditions

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.02.691879

N/A

0DataRank · unranked

0 citations

Jacob T. Stanley, Daniel Ramirez, Joseph F. Cardiello, Nina Ripin, Roy Parker +2 more

TFIID Enables RNA Polymerase II Promoter-Proximal Pausing

Molecular Cell(2020)10.1016/j.molcel.2020.03.008

N/A

0DataRank · unranked

107 citations

Cecilia B. Levandowski, Kapil Gupta, Zachary L. Maas, John Moir, Jonathan D. Rubin +9 more

Applying knowledge-driven mechanistic inference to toxicogenomics

Toxicology in Vitro(2020)10.1016/j.tiv.2020.104877

N/A

0DataRank · unranked

15 citations

Tiffany J. Callahan, Jessica Westfall, Nayland S. Meitzer, Robin D. Dowell, Lawrence E. Hunter +1 more

The MUC5B-associated variant rs35705950 resides within an enhancer subject to lineage- and disease-dependent epigenetic remodeling

JCI Insight(2020)10.1172/jci.insight.144294

N/A

0DataRank · unranked

37 citations

Sarah K. Sasse, Jonathan S. Kurche, Margaret Gruca, Jonathan Cardwell, Tsukasa Okamoto +12 more

Combining signal and sequence to detect RNA polymerase initiation in ATAC-seq data

PLoS ONE(2020)10.1371/journal.pone.0232332

N/A

0DataRank · unranked

3 citations

Murad Chowdhury, Margaret Gruca, Robin D. Dowell, Ignacio J. Tripodi

Selective inhibition of CDK7 reveals high-confidence targets and new models for TFIIH function in transcription

Genes & Development(2020)10.1101/gad.341545.120

N/A

0DataRank · unranked

88 citations

Zachary C. Poss, Benjamin Erickson, Zachary L. Maas, Christopher C. Ebmeier, Jared L. Johnson +24 more

Transcription factor enrichment analysis (TFEA): Quantifying the activity of hundreds of transcription factors from a single experiment

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.25.919738

N/A

0DataRank · unranked

11 citations

Jacob T. Stanley, Rutendo F. Sigauke, Cecilia B. Levandowski, Zachary L. Maas, Jessica Westfall +3 more

Deregulated mito-nuclear communication alters chromatin plasticity and differentiation potential of mesenchymal stem cells upon ageing

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.02.022293

N/A

0DataRank · unranked

3 citations

Swati Parekh, Monika Maleszewska, Maarouf Baghdadi, Ignacio J. Tripodi, Chrysa Nikopoulou +8 more

Just 2% of SARS-CoV-2−positive individuals carry 90% of the virus circulating in communities

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2104547118

N/A

0DataRank · unranked

169 citations

Tassa Saldi, Patrick Gonzales, Erika Lasda, Carolyn J. Decker, Kimngan L. Tat +20 more

Transcription factor enrichment analysis (TFEA) quantifies the activity of multiple transcription factors from a single experiment

Communications Biology(2021)10.1038/s42003-021-02153-7

N/A

0DataRank · unranked

66 citations

Jacob T. Stanley, Rutendo F. Sigauke, Cecilia B. Levandowski, Zachary L. Maas, Jessica Westfall +3 more

Deconvolution of multiplexed transcriptional responses to wood smoke particles defines rapid aryl hydrocarbon receptor signaling dynamics

Journal of Biological Chemistry(2021)10.1016/j.jbc.2021.101147

N/A

0DataRank · unranked

30 citations

Sarah K. Sasse, Margaret Gruca, Lynn Sanford, Robin D. Dowell, Anthony N. Gerber +1 more

Characterization of Global Gene Expression, Regulation of Metal Ions, and Infection Outcomes in Immune-Competent 129S6 Mouse Macrophages

Infection and Immunity(2021)10.1128/iai.00273-21

N/A

0DataRank · unranked

5 citations

Michael Minson, Mary A. Allen, Robin D. Dowell, Amy E. Palmer, Lara N. Janiszewski

Application of a bioinformatic pipeline to RNA-seq data identifies novel virus-like sequence in human blood

G3 Genes Genomes Genetics(2021)10.1093/g3journal/jkab141

N/A

0DataRank · unranked

8 citations

Patrick Gonzales, Thomas J. LaRocca, Yuping Song, Joanne Wuu, Michael Benatar +6 more

Protocol Variations in Run-On Transcription Dataset Preparation Produce Detectable Signatures in Sequencing Libraries

Research Square(2021)10.21203/rs.3.rs-571377/v1

N/A

0DataRank · unranked

0 citations

Rutendo F. Sigauke, Jacob T. Stanley, Mary A. Allen, Robin D. Dowell, Samuel S. Hunter

Protocol variations in run-on transcription dataset preparation produce detectable signatures in sequencing libraries

BMC Genomics(2022)10.1186/s12864-022-08352-8

N/A

0DataRank · unranked

14 citations

Rutendo F. Sigauke, Jacob T. Stanley, Mary A. Allen, Robin D. Dowell, Samuel S. Hunter

The temporal dynamics of lncRNA Firre -mediated epigenetic and transcriptional regulation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.15.492001

N/A

0DataRank · unranked

3 citations

Erika Lasda, Isabela Tiemy Pereira, Tenaya K. Vallery, Daniel Ramirez, Jordan P. Lewandowski +4 more

Glucocorticoid-regulated bidirectional enhancer RNA transcription pinpoints functional genetic variants linked to asthma

medRxiv(2022)10.1101/2022.11.10.22281906

N/A

0DataRank · unranked

1 citations

Amber Dahlin, Lynn Sanford, Margaret Gruca, Arnav Gupta, Fabienne Gally +6 more

Single cell analysis of transcriptome and open chromatin reveals the dynamics of hair follicle stem cell aging

Frontiers in Aging(2023)10.3389/fragi.2023.1192149

N/A

0DataRank · unranked

9 citations

Dongmei Wang, Robin D. Dowell, Rui Yi, Chi Zhang

Robin D. Dowell

Indexed papers

Top data-sharing exemplar

Papers