Zev J. Gartner

Also affiliated with Universidad Católica de Santa Fe, Chan Zuckerberg Initiative (United States), University of San Francisco

Biochemistry, Genetics and Molecular BiologyEngineeringMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 46 papers. Top paper: “Microfluidics-free single-cell genomics with templated emulsification”.

Microfluidics-free single-cell genomics with templated emulsification

Nature Biotechnology(2023)10.1038/s41587-023-01685-z

N/A

4.2DataRank · unranked

218 citations

Kristina M. Fontanez, Robert H. Meltzer, Yi Xue, Corey E. Hayford, Aaron A. May‐Zhang +20 more

DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors

Cell Systems(2019)10.1016/j.cels.2019.03.003

N/A

1.3DataRank · unranked

4431 citations

Lyndsay M. Murrow, Zev J. Gartner, Christopher S. McGinnis

Single-cell profiling of environmental enteropathy reveals signatures of epithelial remodeling and immune activation

Science Translational Medicine(2022)10.1126/scitranslmed.abi8633

N/A

0.969DataRank · unranked

32 citations

Simutanyi Mwakamui, Travis K. Hughes, Nolawit Mulugeta, Victor Mudenda, Ellen Besa +21 more

Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution

Cell(2022)10.1016/j.cell.2022.04.015

N/A

0.879DataRank · unranked

350 citations

Matthew G. Jones, Santiago Naranjo, William M. Rideout, Kyung Hoi Min, Raymond Ho +18 more

Human microglia states are conserved across experimental models and regulate neural stem cell responses in chimeric organoids

Cell stem cell(2021)10.1016/j.stem.2021.08.015

N/A

0.816DataRank · unranked

229 citations

Sarah S. Soliman, Chang N. Kim, Matthew G. Keefe, Kelsey M. Hennick, Samhita Jain +14 more

Epithelial zonation along the mouse and human small intestine defines five discrete metabolic domains

Nature Cell Biology(2024)10.1038/s41556-023-01337-z

N/A

0.665DataRank · unranked

83 citations

Petr Kašpárek, Brisa Palikuqi, Sara Viragova, Laura Weichselbaum, Christopher S. McGinnis +14 more

Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2108760119

N/A

0.520DataRank · unranked

31 citations

Anna Noren Rubin, Shanni N. Silberberg, Rinaldo Catta-Preta, Kenneth Lim, Athéna R. Ypsilanti +12 more

Linked optical and gene expression profiling of single cells at high-throughput

Genome biology(2020)10.1186/s13059-020-01958-9

N/A

0.489DataRank · unranked

25 citations

Christian Siltanen, Leqian Liu, Kai‐Chun Chang, Zev J. Gartner, Adam R. Abate +1 more

Single-cell analysis of breast cancer metastasis reveals epithelial-mesenchymal plasticity signatures associated with poor outcomes

Journal of Clinical Investigation(2024)10.1172/jci164227

N/A

0.470DataRank · unranked

22 citations

Weilun Tan, Catherine M.M. Diadhiou, Christopher S. McGinnis, Aamna Abbasi, Saad Hasnain +22 more

No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells

BMC Biology(2021)10.1186/s12915-020-00941-x

N/A

0.464DataRank · unranked

21 citations

David Siegel, Guorui Xie, George C. Hartoularos, Mars Stone, Chun Jimmie Ye +4 more

Microfluidics-free single-cell genomics with templated emulsification

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.10.495582

N/A

0.449DataRank · unranked

19 citations

Kristina M. Fontanez, Robert H. Meltzer, Yi Xue, Corey E. Hayford, Aaron A. May‐Zhang +20 more

Lineage Recording Reveals the Phylodynamics, Plasticity and Paths of Tumor Evolution

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.12.464111

N/A

0.439DataRank · unranked

10 citations

Matthew G. Jones, Santiago Naranjo, William M. Rideout, Kyung Hoi Min, Raymond Ho +18 more

T cell circuits that sense antigen density with an ultrasensitive threshold

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.21.427654

N/A

0.434DataRank · unranked

17 citations

Wei Yu, Katie Cabral, Olivia A. Creasey, Maria del Pilar Lopez Pazmino, Yurie Tonai +6 more

Defining breast epithelial cell types in the single-cell era

Developmental Cell(2025)10.1016/j.devcel.2025.06.032

N/A

0.396DataRank · unranked

13 citations

Eric G. Carlson, Tatyana Lev, Bailey Marshall, Austin D. Reed, Alex P. Sanchez‐Covarrubias +27 more

Programming the Self-Organization of Endothelial Cells into Perfusable Microvasculature

Tissue Engineering Part A(2022)10.1089/ten.tea.2022.0072

N/A

0.385DataRank · unranked

12 citations

Vasudha Srivastava, Austin J. Graham, Maxwell C. Coyle, Connor Stashko, Valerie M. Weaver +2 more

Dissecting the contributions of tumor heterogeneity on metastasis at single-cell resolution

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.04.502697

N/A

0.345DataRank · unranked

9 citations

Weilun Tan, Catherine M.M. Diadhiou, Christopher S. McGinnis, Aamna Abbasi, Saad Hasnain +20 more

Single-cell profiling of environmental enteropathy reveals signatures of epithelial remodeling and immune activation in severe disease

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.11.439202

N/A

0.330DataRank · unranked

8 citations

Thomas Wallach, Simutanyi Mwakamui, Travis K. Hughes, Nolawit Mulugeta, Victor Mudenda +19 more

Selfish mutations promote age-associated erosion of mtDNA integrity in mammals

Nature Communications(2025)10.1038/s41467-025-60477-y

N/A

0.312DataRank · unranked

7 citations

Daniel N. Conrad, Zev J. Gartner, Patrick H. O’Farrell, Ekaterina Korotkevich

High diversity droplet microfluidic libraries generated with a commercial liquid spotter

Scientific Reports(2021)10.1038/s41598-021-83865-y

N/A

0.292DataRank · unranked

6 citations

Christian Siltanen, Ata Dolatmoradi, Chen Sun, Kai‐Chun Chang, Russell H. Cole +3 more

Single Cell Enhancer Activity Maps Neuronal Lineages in Embryonic Mouse Basal Ganglia

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.11.426285

N/A

0.230DataRank · unranked

2 citations

Anna Noren Rubin, Shanni N. Silberberg, Rinaldo Catta-Preta, Kenneth Lim, Iva Zdilar +11 more

No detectable alloreactive transcriptional responses during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.12.946509

N/A

0.104DataRank · unranked

1 citations

David Siegel, Guorui Xie, Mars Stone, Zev J. Gartner, Nadia R. Roan +2 more

Mapping hormone-regulated cell-cell interaction networks in the human breast at single-cell resolution

Cell Systems(2022)10.1016/j.cels.2022.06.005

N/A

0DataRank · unranked

40 citations

Robert J. Weber, Joseph A. Caruso, Christopher S. McGinnis, Kiet T. Phong, Philippe Gascard +7 more

Simple, Affordable, and Modular Patterning of Cells using DNA

Journal of Visualized Experiments(2021)10.3791/61937-v

N/A

0DataRank · unranked

1 citations

David M. Patterson, Olivia J. Scheideler, Russell Cole, Adam R. Abate, David V. Schaffer +3 more

Simple, Affordable, and Modular Patterning of Cells using DNA

Journal of Visualized Experiments(2021)10.3791/61937

N/A

0DataRank · unranked

12 citations

David M. Patterson, Olivia J. Scheideler, Russell H. Cole, Adam R. Abate, David V. Schaffer +3 more

Systematically quantifying morphological features reveals constraints on organoid phenotypes

Cell Systems(2022)10.1016/j.cels.2022.05.008

N/A

0DataRank · unranked

25 citations

Jasmine Lee, Christopher Coté, Margaret C. Dunagin, Ilya Lukonin, Nikkita Salla +7 more

Expanding the boundaries of synthetic development

Developmental Biology(2021)10.1016/j.ydbio.2021.01.017

N/A

0DataRank · unranked

20 citations

Zev J. Gartner, Iain Martyn

EPH/EPHRIN regulates cellular organization by actomyosin contractility effects on cell contacts

The Journal of Cell Biology(2021)10.1083/jcb.202005216

N/A

0DataRank · unranked

37 citations

Vasudha Srivastava, Jonathon M. Muncie, Valerie M. Weaver, Zev J. Gartner, Jeffrey O. Bush +1 more

T cell circuits that sense antigen density with an ultrasensitive threshold

Science(2021)10.1126/science.abc1855

N/A

0DataRank · unranked

186 citations

Wei Yu, Katelyn A. Cabral, Olivia A. Creasey, Maria del Pilar Lopez Pazmino, Yurie Tonai +6 more

Microenvironmental engineering improves the self-organization of patterned microvascular networks

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.04.487052

N/A

0DataRank · unranked

2 citations

Vasudha Srivastava, Maxwell C. Coyle, Connor Stashko, Valerie M. Weaver, Zev J. Gartner +1 more

Epithelial TNF controls cell differentiation and CFTR activity to maintain intestinal mucin homeostasis

Journal of Clinical Investigation(2023)10.1172/jci163591

N/A

0DataRank · unranked

33 citations

David Castillo‐Azofeifa, Jérémie Rispal, Tomáš Wald, Rachel K. Zwick, Brisa Palikuqi +8 more

Modeling collective cell behavior in cancer: Perspectives from an interdisciplinary conversation

Cell Systems(2023)10.1016/j.cels.2023.03.002

N/A

0DataRank · unranked

14 citations

Alexander R.A. Anderson, Abhinav Bhushan, Paul Bogdan, Jose Javier Bravo‐Cordero, Amy Brock +36 more

D-SPIN constructs gene regulatory network models from multiplexed scRNA-seq data revealing organizing principles of cellular perturbation response

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.19.537364

N/A

0DataRank · unranked

23 citations

Sisi Chen, Tiffany Tsou, Christopher S. McGinnis, Tahmineh Khazaei, Qin Zhu +10 more

Epithelial zonation along the mouse and human small intestine defines five discrete metabolic domains

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.20.558726

N/A

0DataRank · unranked

9 citations

Petr Kašpárek, Brisa Palikuqi, Sara Viragova, Laura Weichselbaum, Christopher S. McGinnis +14 more

deMULTIplex2: robust sample demultiplexing for scRNA-seq

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.11.536275

N/A

0DataRank · unranked

8 citations

Daniel N. Conrad, Zev J. Gartner, Qin Zhu

Coordinated immune dysregulation in Juvenile Dermatomyositis revealed by single-cell genomics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.07.566033

N/A

0DataRank · unranked

3 citations

Camilla Wibrand, Emily Flynn, George C. Hartoularos, Yang Sun, Chun Jimmie Ye +5 more

Patterning and folding of intestinal villi by active mesenchymal dewetting

Cell(2024)10.1016/j.cell.2024.04.039

N/A

0DataRank · unranked

88 citations

Teemu J. Häkkinen, Hikaru Miyazaki, Vasudha Srivastava, Emilie Barruet, Christopher S. McGinnis +14 more

Size-dependent protein segregation creates a spatial switch for Notch signaling and function

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.28.176560

N/A

0DataRank · unranked

4 citations

Kaden M. Southard, Woon Ryoung Kim, Nam Hyeong Kim, Ramu Gopalappa, Minji An +14 more

deMULTIplex2: robust sample demultiplexing for scRNA-seq

Genome biology(2024)10.1186/s13059-024-03177-y

N/A

0DataRank · unranked

25 citations

Daniel N. Conrad, Zev J. Gartner, Qin Zhu

High Throughput Yeast Strain Phenotyping with Droplet-Based RNA Sequencing

Journal of Visualized Experiments(2020)10.3791/61014-v

N/A

0DataRank · unranked

1 citations

K. C. Chang, Leqian Liu, Zev J. Gartner, Adam R. Abate, Jesse Q. Zhang

Coordinated immune dysregulation in juvenile dermatomyositis revealed by single-cell genomics

JCI Insight(2024)10.1172/jci.insight.176963

N/A

0DataRank · unranked

14 citations

Camilla Wibrand, Emily Flynn, George C. Hartoularos, Yang Sun, Chioma J. Madubata +7 more

Stress relaxing granular bioprinting materials enable complex and uniform organoid self-organization

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.01.578324

N/A

0DataRank · unranked

5 citations

Michelle W.L. Khoo, Vasudha Srivastava, Sara Viragova, Honesty Kim, Kavita Parekh +19 more

High Throughput Yeast Strain Phenotyping with Droplet-Based RNA Sequencing

Journal of Visualized Experiments(2020)10.3791/61014

N/A

0DataRank · unranked

3 citations

Kai‐Chun Chang, Leqian Liu, Zev J. Gartner, Adam R. Abate, Jesse Q. Zhang

Roadmap for the multiscale coupling of biochemical and mechanical signals during development

Physical Biology(2020)10.1088/1478-3975/abd0db

N/A

0DataRank · unranked

70 citations

Edwin Munro, Idse Heemskerk, Aryeh Warmflash, Laura Bocanegra-Moreno, Kasumi Kishi +23 more

Tuning collagen and collagen-alginate mechanics through extrusion bioprinting process parameters

RSC Advances(2025)10.1039/d5ra03922c

N/A

0DataRank · unranked

4 citations

Karla Gutierrez Cebrero, Nandita Venkataraman, Dharneedar Ravichandran, Yunzhi Lin, Zeqing Jin +3 more

Membrane compartmentalization by adherens junctions creates a spatial switch for Notch signaling and function

Research Square(2021)10.21203/rs.3.rs-956506/v1

N/A

0DataRank · unranked

0 citations

Kaden M. Southard, Woon Ryoung Kim, Annie Lin, Nam Hyeong Kim, Ramu Gopalappa +15 more

HybriSeq: probe-based device-free single-cell RNA profiling

Communications Biology(2025)10.1038/s42003-025-08702-8

N/A

0DataRank · unranked

3 citations

David T. Brown, Shuqin Zhou, Brittany Moser, Qin Zhu, Zev J. Gartner +2 more