Prem P. Chapagain

Also affiliated with Florida International University, Molecular Research Institute

MedicineBiochemistry, Genetics and Molecular BiologyMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile

0.428Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The natural history and genotype–phenotype correlations of TMPRSS3 hearing loss: an international, multi-center, cohort analysis

Human Genetics(2024)10.1007/s00439-024-02648-3

Top 43%

0.428DataRank

Top 43%7 citations

Cris Lanting, Molly Smeal, Susan H. Blanton, Derek M. Dykxhoorn, Pei-Ciao Tang +75 more

Papers

Driven by 34 papers — median percentile 57. Top paper: “The natural history and genotype–phenotype correlations of TMPRSS3 hearing loss: an international, multi-center, cohort analysis”.

The natural history and genotype–phenotype correlations of TMPRSS3 hearing loss: an international, multi-center, cohort analysis

Human Genetics(2024)10.1007/s00439-024-02648-3

Top 43%

0.428DataRank

Top 43%7 citations

Cris Lanting, Molly Smeal, Susan H. Blanton, Derek M. Dykxhoorn, Pei-Ciao Tang +75 more

Substrate binding of human and bacterial type IA topoisomerase: An experimentation with AlphaFold 3.0

Computational and Structural Biotechnology Journal(2025)10.1016/j.csbj.2025.03.041

N/A

0.278DataRank · unranked

4 citations

Ally Aguado, Ana M Preza, Abhilasha Kadel, Anjani Mogallur, Briana Gonzalez +7 more

Insights into the DNA and RNA Interactions of Human Topoisomerase III Beta Using Molecular Dynamics Simulations

Journal of Chemical Information and Modeling(2024)10.1021/acs.jcim.4c00472

N/A

0.165DataRank · unranked

2 citations

Yuk‐Ching Tse‐Dinh, Prem P. Chapagain, Yasir Mamun

The Integrin Binding Peptide, ATN-161, as a Novel Therapy for SARS-CoV-2 Infection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.15.153387

N/A

0DataRank · unranked

18 citations

Naoki Iwanaga, Prem P. Chapagain, Wenshu Zheng, Chad J. Roy, Ye Hu +3 more

Lipid-specific protein oligomerization is regulated by two interfaces in Marburg virus matrix protein VP40

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.13.381350

N/A

0DataRank · unranked

0 citations

Monica L. Husby, Kaveesha J. Wijesinghe, Stephanie Angel, Nisha Bhattarai, Bernard S. Gerstman +4 more

Lipid-specific oligomerization of the Marburg virus matrix protein VP40 is regulated by two distinct interfaces for virion assembly

Journal of Biological Chemistry(2021)10.1016/j.jbc.2021.100796

N/A

0DataRank · unranked

19 citations

Monica L. Husby, Kaveesha J. Wijesinghe, Stephanie Angel, Nisha Bhattarai, Bernard S. Gerstman +4 more

Ebola virus protein VP40 binding to Sec24c for transport to the plasma membrane

Proteins Structure Function and Bioinformatics(2021)10.1002/prot.26221

N/A

0DataRank · unranked

10 citations

Elumalai Pavadai, Rudramani Pokhrel, Prabin Baral, Md Lokman Hossen, Robert V. Stahelin +3 more

Incorporation of 5’,8-cyclo-2’deoxyadenosines by DNA repair polymerases via base excision repair

DNA repair(2021)10.1016/j.dnarep.2021.103258

N/A

0DataRank · unranked

6 citations

Daniela Hernandez, Christopher Brache, Chryssostomos Chatgilialoglu, Marios G. Krokidis, Prem P. Chapagain +2 more

Molecular assembly of measles and Nipah virus: specific lipid binding drives conformational change and matrix polymerization

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.11.463969

N/A

0DataRank · unranked

0 citations

Monica L. Husby, William B. Kiosses, Jieyun Yin, Linda J. Rennick, Anja Heiner +13 more

Measles and Nipah virus assembly: Specific lipid binding drives matrix polymerization

Science Advances(2022)10.1126/sciadv.abn1440

N/A

0DataRank · unranked

36 citations

Monica L. Husby, William B. Kiosses, Jieyun Yin, Roopashi Saxena, Linda J. Rennick +14 more

Conformational Dynamics of mCherry Variants: A Link between Side-Chain Motions and Fluorescence Brightness

The Journal of Physical Chemistry B(2022)10.1021/acs.jpcb.2c05584

N/A

0DataRank · unranked

11 citations

Premashis Manna, Nancy Douglas, Prem P. Chapagain, Ralph Jimenez, Srijit Mukherjee

Immunomodulatory LncRNA on antisense strand of ICAM-1 augments SARS-CoV-2 infection-associated airway mucoinflammatory phenotype

iScience(2022)10.1016/j.isci.2022.104685

N/A

0DataRank · unranked

17 citations

Arpan Acharya, Marko Manevski, Dominika Houserova, Michael D. Cioffi, Kabita Pandey +7 more

Conformational dynamics of mCherry variants: a link between sidechain motions and fluorescence brightness

ChemRxiv(2022)10.26434/chemrxiv-2022-4c5q9

N/A

0DataRank · unranked

1 citations

Premashis Manna, Nancy Douglas, Prem P. Chapagain, Ralph Jimenez, Srijit Mukherjee

Responsiveness of the electrically stimulated cochlear nerve in patients with a missense variant in ACTG1 : Preliminary Results

medRxiv(2022)10.1101/2022.10.24.22281451

N/A

0DataRank · unranked

0 citations

Denise Yan, Jeffrey Skidmore, Prem P. Chapagain, Xuezhong Liu, Shuman He +1 more

Restoring susceptibility to aminoglycosides: identifying small molecule inhibitors of enzymatic inactivation

RSC Medicinal Chemistry(2023)10.1039/d3md00226h

N/A

0DataRank · unranked

17 citations

Jan Sklenicka, Clemencia Pinilla, Marc A. Giulianotti, Prem P. Chapagain, Radleigh G. Santos +3 more

Molecular interactions between perlecan LG3 and the SARS‐CoV‐2 spike protein receptor binding domain

Protein Science(2023)10.1002/pro.4843

N/A

0DataRank · unranked

7 citations

Md Lokman Hossen, Grant Talkington, Milla Volic, Hugo Perez, Purushottam B. Tiwari +3 more

Elucidating Residue-Level Determinants Affecting Dimerization of Ebola Virus Matrix Protein Using High-Throughput Site Saturation Mutagenesis and Biophysical Approaches

The Journal of Physical Chemistry B(2023)10.1021/acs.jpcb.3c01759

N/A

0DataRank · unranked

8 citations

Atul Bhardwaj, Balindile B. Motsa, Roopashi Saxena, Tej Sharma, Prem P. Chapagain +3 more

Macromolecular crowding potently stimulates DNA supercoiling activity of Mycobacterium tuberculosis DNA gyrase

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.105439

N/A

0DataRank · unranked

8 citations

Prem P. Chapagain, Fenfei Leng, Zifang Deng

Responsiveness of the electrically stimulated cochlear nerve in patients with a missense variant in ACTG1: preliminary results

Frontiers in Audiology and Otology(2023)10.3389/fauot.2023.1213323

N/A

0DataRank · unranked

0 citations

Denise Yan, Jeffrey Skidmore, Prem P. Chapagain, Xue Zhong Liu, Shuman He +1 more

PI(4,5)P2 binding sites in the Ebola virus matrix protein VP40 modulate assembly and budding

Journal of Lipid Research(2024)10.1016/j.jlr.2024.100512

N/A

0DataRank · unranked

17 citations

Melissa R. Budicini, Nisha Bhattarai, Tej Sharma, Sarah Urata, Bernard S. Gerstman +4 more

Structure–Activity Relationship of Pyrrolidine Pentamine Derivatives as Inhibitors of the Aminoglycoside 6′-N-Acetyltransferase Type Ib

Antibiotics(2024)10.3390/antibiotics13070672

N/A

0DataRank · unranked

6 citations

Tung Tran, María Soledad Ramirez, Haley M. Donow, Angel J. Magaña, Travis LaVoi +8 more

Computational and experimental identification of keystone interactions in Ebola virus matrix protein VP40 dimer formation

Protein Science(2024)10.1002/pro.4978

N/A

0DataRank · unranked

6 citations

Roopashi Saxena, Tej Sharma, Jacob P. Conarty, Valentina Toro Ramirez, Balindile B. Motsa +6 more

Minor electrostatic changes robustly increase VP40 membrane binding, assembly, and budding of Ebola virus matrix protein derived virus-like particles

Journal of Biological Chemistry(2024)10.1016/j.jbc.2024.107213

N/A

0DataRank · unranked

5 citations

Tej Sharma, Michael D. Cioffi, Prem P. Chapagain, Robert V. Stahelin, Balindile B. Motsa

Role of phosphatidic acid lipids on plasma membrane association of the Ebola virus matrix protein VP40

Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids(2024)10.1016/j.bbalip.2024.159464

N/A

0DataRank · unranked

4 citations

Monica L. Husby, Bernard S. Gerstman, Robert V. Stahelin, Prem P. Chapagain, Michael D. Cioffi

Ebola Virus Matrix Protein VP40 Single Mutations G198R and G201R Significantly Enhance Plasma Membrane Localization

The Journal of Physical Chemistry B(2024)10.1021/acs.jpcb.4c02700

N/A

0DataRank · unranked

4 citations

Tej Sharma, Balindile B. Motsa, Nisha Bhattarai, Bernard S. Gerstman, Robert V. Stahelin +2 more

Minor changes in electrostatics robustly increase VP40 membrane binding, assembly, and budding of Ebola virus matrix protein derived virus-like particles

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.30.578092

N/A

0DataRank · unranked

0 citations

Tej Sharma, Prem P. Chapagain, Robert V. Stahelin, Balindile B. Motsa

Inhibition of HMGA2 binding to AT-rich DNA by its negatively charged C-terminus

Nucleic Acids Research(2025)10.1093/nar/gkaf035

N/A

0DataRank · unranked

5 citations

Zifang Deng, Miguel Santos-Fernandez, Kévin Jeanne Dit Fouque, Prem P. Chapagain, Jeremy W. Chambers +3 more

Design of a stapled peptide that binds to the Ebola virus matrix protein dimer interface

RSC Chemical Biology(2025)10.1039/d5cb00048c

N/A

0DataRank · unranked

3 citations

Madison M. Wright, Benjamin M. Rathman, Ukesh Karki, Prem P. Chapagain, Juan R. Del Valle +2 more

Substituted Triazole-3,5-Diamine Compounds as Novel Human Topoisomerase III Beta Inhibitors

International Journal of Molecular Sciences(2025)10.3390/ijms26136193

N/A

0DataRank · unranked

2 citations

Somaia Haque Chadni, Ramanjaneyulu Rayala, Hasham S. Sofi, Shomita Ferdous, Rudramani Pokhrel +4 more

Variants of the Ebola virus matrix protein VP40 have differential effects on oligomerization and plasma membrane interactions

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110489

N/A

0DataRank · unranked

1 citations

Barsha Bhowal, Yogesh B. Narkhede, Ukesh Karki, Valentina Toro Ramirez, Samuel W Eger +4 more

The Integrin Binding Peptide, ATN-161, as a Novel Therapy for SARS-CoV-2 Infection

JACC Basic to Translational Science(2020)10.1016/j.jacbts.2020.10.003

N/A

0DataRank · unranked

88 citations

Naoki Iwanaga, Prem P. Chapagain, Wenshu Zheng, Chad J. Roy, Ye Hu +3 more

Unscheduled m6A Deposition in RNA via m6ATP Incorporation by DNA Polymerases

International Journal of Molecular Sciences(2025)10.3390/ijms26199263

N/A

0DataRank · unranked

0 citations

Josu de la Fuente, Prem P. Chapagain, Yuan Liu, Fei Qu

Covalent Complex of DNA and Bacterial Topoisomerase: Implications in Antibacterial Drug Development

ChemMedChem(2020)10.1002/cmdc.201900721

N/A

0DataRank · unranked

21 citations

Prem P. Chapagain, Ahmed Seddek, Thirunavukkarasu Annamalai, Aykut Üren, Yuk‐Ching Tse‐Dinh +1 more

Identification of HMGA2 inhibitors by AlphaScreen-based ultra-high-throughput screening assays

Scientific Reports(2020)10.1038/s41598-020-75890-0

N/A

0DataRank · unranked

30 citations

Nadezda Bryan, Sabrina Battista, Juliano T. Freitas, Alyssa Garabedian, Federica D’Alessio +11 more

Prem P. Chapagain

Indexed papers

Top data-sharing exemplar

Papers