Neşe Kurt Yılmaz

University of Massachusetts Chan Medical School

MedicineImmunology and MicrobiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 24 papers. Top paper: “Direct delivery of Cas-embedded cytosine base editors as ribonucleoprotein complexes for efficient and accurate editing of clinically relevant targets”.

Direct delivery of Cas-embedded cytosine base editors as ribonucleoprotein complexes for efficient and accurate editing of clinically relevant targets

Nucleic Acids Research(2024)10.1093/nar/gkae1217

N/A

0.297DataRank · unranked

5 citations

Jing Zeng, Pengpeng Liu, My Anh Nguyen, Diego Suchenski Loustaunau, Daniel E. Bauer +4 more

Structural Analysis of Inhibitor Binding to Enterovirus-D68 3C Protease

Viruses(2025)10.3390/v17010075

N/A

0.273DataRank · unranked

4 citations

Ala M. Shaqra, Akbar Ali, Neşe Kurt Yılmaz, Celia A. Schiffer, Vincent Azzolino

Elucidating the Substrate Envelope of Enterovirus 68-3C Protease: Structural Basis of Specificity and Potential Resistance

Viruses(2024)10.3390/v16091419

N/A

0.259DataRank · unranked

4 citations

Ala M. Shaqra, Akbar Ali, Neşe Kurt Yılmaz, Celia A. Schiffer, Vincent Azzolino

Next generation APOBEC3 inhibitors: optimally designed for potency and nuclease stability

Nucleic Acids Research(2025)10.1093/nar/gkaf234

N/A

0.241DataRank · unranked

4 citations

Wazo Myint, Jeong Min Lee, Diego Suchenski Loustaunau, Vanivilasini Balachandran, Ala M. Shaqra +5 more

IgA MAb blocks SARS-CoV-2 Spike-ACE2 interaction providing mucosal immunity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.15.096719

N/A

0DataRank · unranked

27 citations

Qi Li, Shurong Hou, Zachary A. Schiller, Aaron Wallace, Alla Amcheslavsky +12 more

Deciphering complex mechanisms of resistance and loss of potency through coupled molecular dynamics and machine learning.

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.08.139105

N/A

0DataRank · unranked

0 citations

Neşe Kurt Yılmaz, Celia A. Schiffer, Florian Leidner

Viral proteases: Structure, mechanism and inhibition

The Enzymes(2021)10.1016/bs.enz.2021.09.004

N/A

0DataRank · unranked

91 citations

Neşe Kurt Yılmaz, Celia A. Schiffer, Jacqueto Zephyr

Structural basis of substrate specificity in human cytidine deaminase family APOBEC3s

Journal of Biological Chemistry(2021)10.1016/j.jbc.2021.100909

N/A

0DataRank · unranked

31 citations

Jeong Min Lee, Wazo Myint, Hiroshi Matsuo, Neşe Kurt Yılmaz, Celia A. Schiffer +1 more

Inhibiting HTLV-1 Protease: A Viable Antiviral Target

ACS Chemical Biology(2021)10.1021/acschembio.0c00975

N/A

0DataRank · unranked

24 citations

M. Henes, Nathaniel Talledge, L.N. Rusere, K. Kosovrasti, E.A. Nalivaika +6 more

Deciphering the Molecular Mechanism of HCV Protease Inhibitor Fluorination as a General Approach to Avoid Drug Resistance

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.30.470632

N/A

0DataRank · unranked

0 citations

Desaboini Nageswara Rao, Sang V. Vo, M. Henes, K. Kosovrasti, Ashley N. Matthew +7 more

Mucosal nanobody IgA as inhalable and affordable prophylactic and therapeutic treatment against SARS-CoV-2 and emerging variants

Frontiers in Immunology(2022)10.3389/fimmu.2022.995412

N/A

0DataRank · unranked

18 citations

Fiachra Humphries, Roxie C. Girardin, Aaron Wallace, Monir Ejemel, Alla Amcheslavsky +17 more

Allosteric quinoxaline-based inhibitors of the flavivirus NS2B/NS3 protease

Bioorganic Chemistry(2022)10.1016/j.bioorg.2022.106269

N/A

0DataRank · unranked

18 citations

Desaboini Nageswara Rao, Colby Johnson, Ala M. Shaqra, E.A. Nalivaika, Aria Jordan +4 more

Deciphering the Molecular Mechanism of HCV Protease Inhibitor Fluorination as a General Approach to Avoid Drug Resistance

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167503

N/A

0DataRank · unranked

15 citations

Desaboini Nageswara Rao, Sang V. Vo, M. Henes, K. Kosovrasti, Ashley N. Matthew +7 more

Selection of HIV-1 for resistance to fifth-generation protease inhibitors reveals two independent pathways to high-level resistance

eLife(2023)10.7554/elife.80328

N/A

0DataRank · unranked

23 citations

Sook-Kyung Lee, Shuntai Zhou, G.J. Lockbaum, M. Henes, Amy Sondgeroth +7 more

HIV-1 protease inhibitors with a P1 phosphonate modification maintain potency against drug-resistant variants by increased interactions with flap residues

European Journal of Medicinal Chemistry(2023)10.1016/j.ejmech.2023.115501

N/A

0DataRank · unranked

15 citations

L.N. Rusere, M. Henes, K. Kosovrasti, Desaboini Nageswara Rao, E. Spielvogel +7 more

Selection of HIV-1 for resistance to fifth-generation protease inhibitors reveals two independent pathways to high-level resistance

UNC Libraries(2023)10.17615/k6f6-8629

N/A

0DataRank · unranked

0 citations

Amy Sondgeroth, Akbar Ali, E. Spielvogel, M. Henes, Sook-Kyung Lee +7 more

Next generation APOBEC3 inhibitors: Optimally designed for potency and nuclease stability

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.05.611238

N/A

0DataRank · unranked

3 citations

Wazo Myint, Jeong Min Lee, Diego Suchenski-Loustaunau, Vanivilasini Balachandran, Ala M. Shaqra +5 more

Direct delivery of stabilized Cas-embedded base editors achieves efficient and accurate editing of clinically relevant targets

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.08.579528

N/A

0DataRank · unranked

1 citations

Jing Zeng, Pengpeng Liu, My Anh Nguyen, Diego Suchenski Loustaunau, Daniel E. Bauer +4 more

Fluorinated HIV-1 protease inhibitors containing chiral hydroxyethylbenzene and indanol as P2′ ligands with potent activity against drug-resistant variants

European Journal of Medicinal Chemistry(2025)10.1016/j.ejmech.2025.118510

N/A

0DataRank · unranked

1 citations

E. Spielvogel, Desaboini Nageswara Rao, L.N. Rusere, Ala M. Shaqra, G.J. Lockbaum +6 more

A cross-reactive human IgA monoclonal antibody blocks SARS-CoV-2 spike-ACE2 interaction

Nature Communications(2020)10.1038/s41467-020-18058-8

N/A

0DataRank · unranked

185 citations

Qi Li, Shurong Hou, Zachary A. Schiller, Julia A. Tree, Aaron Wallace +20 more

Structural Analysis of Inhibitor Binding to the Feline Enteric Coronavirus (FECV) Main Protease

Viruses(2025)10.3390/v17111506

N/A

0DataRank · unranked

0 citations

Stephanie Moquin, Dustin Dovala, Jagroop Kaur, Neşe Kurt Yılmaz, Ala M. Shaqra +2 more

Crystal Structure of a Soluble APOBEC3G Variant Suggests ssDNA to Bind in a Channel that Extends between the Two Domains

Journal of Molecular Biology(2020)10.1016/j.jmb.2020.10.020

N/A

0DataRank · unranked

18 citations

Wazo Myint, Krista A. Delviks‐Frankenberry, Shurong Hou, Tapan Kanai, Vanivilasini Balachandran +7 more

Structural Analysis of Potent Hybrid HIV-1 Protease Inhibitors Containing Bis-tetrahydrofuran in a Pseudosymmetric Dipeptide Isostere

Journal of Medicinal Chemistry(2020)10.1021/acs.jmedchem.0c00529

N/A

0DataRank · unranked

7 citations

G.J. Lockbaum, M. Henes, Sook-Kyung Lee, E. Spielvogel, Desaboini Nageswara Rao +7 more

Optimizing the refinement of merohedrally twinned P61 HIV-1 protease–inhibitor cocrystal structures

Acta Crystallographica Section D Structural Biology(2020)10.1107/s2059798320001989

N/A

0DataRank · unranked

1 citations

Florian Leidner, William E. Royer, Neşe Kurt Yılmaz, Celia A. Schiffer, G.J. Lockbaum