🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Maxim Imakaev

University of Massachusetts Chan Medical School

ORCID: 0000-0002-5320-2728

Also affiliated with Massachusetts Institute of Technology

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological SciencesMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
8.0Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Nationwide Trends in COVID-19 Cases and SARS-CoV-2 RNA Wastewater Concentrations in the United States

ACS ES&T Water(2022)10.1021/acsestwater.1c00434
Top 6%
4.0DataRank
Top 6%99 citations

Fuqing Wu, Kyle A. McElroy, Maxim Imakaev, Noriko Endo, Amy Xiao +15 more

Papers

Driven by 20 papers — median percentile 93. Top paper: “Nationwide Trends in COVID-19 Cases and SARS-CoV-2 RNA Wastewater Concentrations in the United States”.

Nationwide Trends in COVID-19 Cases and SARS-CoV-2 RNA Wastewater Concentrations in the United States

ACS ES&T Water(2022)10.1021/acsestwater.1c00434
Top 6%
4.0DataRank
Top 6%99 citations

Fuqing Wu, Kyle A. McElroy, Maxim Imakaev, Noriko Endo, Amy Xiao +15 more

The 4D Nucleome Data Portal as a resource for searching and visualizing curated nucleomics data

Nature Communications(2022)10.1038/s41467-022-29697-4
Top 7%
3.4DataRank
Top 7%183 citations

Andrew J. Schroeder, Koray Kırlı, Andrea Cosolo, Clara Bakker, Luisa Mercado +18 more

Bioframe: operations on genomic intervals in Pandas dataframes

Bioinformatics(2024)10.1093/bioinformatics/btae088
N/A
1.0DataRank · unranked
49 citations

Nezar Abdennur, Geoffrey Fudenberg, Ilya M. Flyamer, Aleksandra A. Galitsyna, Anton Goloborodko +3 more

Pairtools: From sequencing data to chromosome contacts

PLoS Computational Biology(2024)10.1371/journal.pcbi.1012164
N/A
0.815DataRank · unranked
228 citations

Nezar Abdennur, Geoffrey Fudenberg, Ilya M. Flyamer, Aleksandra A. Galitsyna, Anton Goloborodko +3 more

The 4D Nucleome Data Portal: a resource for searching and visualizing curated nucleomics data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.14.464435
Top 29%
0.690DataRank
Top 29%13 citations

Andrew J. Schroeder, Koray Kırlı, Andrea Cosolo, Clara Bakker, Luisa Mercado +18 more

Pairtools: from sequencing data to chromosome contacts

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.13.528389
N/A
0.683DataRank · unranked
94 citations

Nezar Abdennur, Geoffrey Fudenberg, Ilya M. Flyamer, Aleksandra A. Galitsyna, Anton Goloborodko +3 more

Nationwide trends in COVID-19 cases and SARS-CoV-2 wastewater concentrations in the United States

medRxiv(2021)10.1101/2021.09.08.21263283
N/A
0.312DataRank · unranked
7 citations

Fuqing Wu, Kyle A. McElroy, Maxim Imakaev, Noriko Endo, Amy Xiao +15 more

A Mechanism of Cohesin-Dependent Loop Extrusion Organizes Mammalian Chromatin Structure in the Developing Embryo

Biophysical Journal(2018)10.1016/j.bpj.2017.11.1417
N/A
0.241DataRank · unranked
4 citations

Johanna Gassler, Maxim Imakaev, Ilya M. Flyamer, Sabrina Ladstätter, Wendy A. Bickmore +4 more

Lineage abundance estimation for SARS-CoV-2 in wastewater using transcriptome quantification techniques

Genome biology(2022)10.1186/s13059-022-02805-9
N/A
0DataRank · unranked
55 citations

Alessandro Zulli, Isabel M. Ott, Ioanna Nika, Mart J. van der Lugt, Mary E. Petrone +48 more

Cooltools: enabling high-resolution Hi-C analysis in Python

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.31.514564
N/A
0DataRank · unranked
115 citations

Nezar Abdennur, Sameer Abraham, Geoffrey Fudenberg, Ilya M. Flyamer, Aleksandra A. Galitsyna +5 more

Crumpled polymer with loops recapitulates key features of chromosome organization

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.01.478588
N/A
0DataRank · unranked
34 citations

B. Slavov, Sergey Belan, Maxim Imakaev, Hugo B. Brandão, Leonid A. Mirny +1 more

Crumpled Polymer with Loops Recapitulates Key Features of Chromosome Organization

Physical Review X(2023)10.1103/physrevx.13.041029
N/A
0DataRank · unranked
65 citations

Hugo B. Brandão, Sergey Belan, B. Slavov, Maxim Imakaev, Leonid A. Mirny +1 more

Metrics to relate COVID-19 wastewater data to clinical testing dynamics

Water Research(2022)10.1016/j.watres.2022.118070
N/A
0DataRank · unranked
120 citations

Fuqing Wu, Mary Bushman, Jianbo Zhang, Maxim Imakaev, Peter R. Chai +18 more

Is tumor mutational burden predictive of response to immunotherapy?

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.03.260265
N/A
0DataRank · unranked
18 citations

Dina Tsukrov, Maxim Imakaev, Lovelace J. Luquette, Leonid A. Mirny, Carino Gurjao

Detecting local changes in chromatin architecture with false discovery control

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.03.281972
N/A
0DataRank · unranked
0 citations

Tao Yang, Maxim Imakaev, Ross C. Hardison, Qunhua Li, Hillary Koch

Variant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification

medRxiv(2021)10.1101/2021.08.31.21262938
N/A
0DataRank · unranked
37 citations

Alessandro Zulli, Isabel M. Ott, Mary E. Petrone, Tara Alpert, Joseph R. Fauver +21 more

Metrics to relate COVID-19 wastewater data to clinical testing dynamics

medRxiv(2021)10.1101/2021.06.10.21258580
N/A
0DataRank · unranked
20 citations

Fuqing Wu, Mary Bushman, Jianbo Zhang, Maxim Imakaev, Peter R. Chai +18 more

Heterochromatin diversity modulates genome compartmentalization and loop extrusion barriers

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.05.455340
N/A
0DataRank · unranked
20 citations

Nezar Abdennur, Maxim Imakaev, Neil Chowdhury, Sriharsa Pradhan, Leonid A. Mirny +2 more

Diverse silent chromatin states modulate genome compartmentalization and loop extrusion barriers

Nature Structural & Molecular Biology(2022)10.1038/s41594-022-00892-7
N/A
0DataRank · unranked
137 citations

Nezar Abdennur, Maxim Imakaev, Neil Chowdhury, Sriharsa Pradhan, Leonid A. Mirny +2 more

Non-parametric Polygenic Risk Prediction via Partitioned GWAS Summary Statistics

The American Journal of Human Genetics(2020)10.1016/j.ajhg.2020.05.004
N/A
0DataRank · unranked
48 citations

Maxim Imakaev, Daniel Hui, Nikolaos A. Patsopoulos, Benjamin M. Neale, Sekar Kathiresan +3 more