Jesse M. Engreitz

Also affiliated with Lucile Packard Children's Hospital, Cardiovascular Institute of the South, Foundation Center, Stanford Health Care, Novo Nordisk (United States), Stanford University

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

6.6Author DataRank

Indexed papers

7in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Type 2 Diabetes Knowledge Portal: An open access genetic resource dedicated to type 2 diabetes and related traits

Cell Metabolism(2023)10.1016/j.cmet.2023.03.001

Top 8%

2.7DataRank

Top 8%136 citations

Marcin von Grotthuss, Jeffrey Massung, Dongkeun Jang, Lizz Caulkins, Ryan Koesterer +82 more

Papers

Driven by 44 papers — median percentile 68. Top paper: “COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets”.

COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets

Nature(2021)10.1038/s41586-021-03570-8

N/A

10.7DataRank · unranked

879 citations

Carly G.K. Ziegler, Graham Heimberg, Rachelly Normand, Yiming Yang, Åsa Segerstolpe +95 more

Genome-wide enhancer maps link risk variants to disease genes

Nature(2021)10.1038/s41586-021-03446-x

N/A

7.7DataRank · unranked

764 citations

Drew T. Bergman, Charles P. Fulco, Philine Guckelberger, Benjamin R. Doughty, Tejal A. Patwardhan +27 more

Deep coverage whole genome sequences and plasma lipoprotein(a) in individuals of European and African ancestries

Nature Communications(2018)10.1038/s41467-018-04668-w

N/A

3.7DataRank · unranked

109 citations

Sanni Ruotsalainen, Robert E. Handsaker, Maris Alver, Jonathan M. Bloom, Timothy Poterba +442 more

Leveraging polygenic enrichments of gene features to predict genes underlying complex traits and diseases

medRxiv(2020)10.1101/2020.09.08.20190561

N/A

3.4DataRank · unranked

132 citations

Jacob C. Ulirsch, Nathan Y. Cheng, Brian L. Trippe, Rebecca S. Fine, Jenkai Miao +24 more

The Type 2 Diabetes Knowledge Portal: An open access genetic resource dedicated to type 2 diabetes and related traits

Cell Metabolism(2023)10.1016/j.cmet.2023.03.001

Top 8%

2.7DataRank

Top 8%136 citations

Marcin von Grotthuss, Jeffrey Massung, Dongkeun Jang, Lizz Caulkins, Ryan Koesterer +82 more

ProfileChaser: searching microarray repositories based on genome-wide patterns of differential expression

Bioinformatics(2011)10.1093/bioinformatics/btr548

N/A

2.7DataRank · unranked

52 citations

Rong Chen, Alexander A. Morgan, Joel T. Dudley, Rohan Mallelwar, Atul Janardhan Butte +1 more

Content-based microarray search using differential expression profiles

BMC Bioinformatics(2010)10.1186/1471-2105-11-603

N/A

2.2DataRank · unranked

41 citations

Alexander A. Morgan, Joel T. Dudley, Rong Chen, Rahul Thathoo, Russ B. Altman +2 more

Prioritizing disease and trait causal variants at the TNFAIP3 locus using functional and genomic features

Nature Communications(2020)10.1038/s41467-020-15022-4

N/A

2.0DataRank · unranked

81 citations

Carl G. de Boer, Charles P. Fulco, Caleb A. Lareau, Masahiro Kanai, Jacob C. Ulirsch +12 more

Convergence of coronary artery disease genes onto endothelial cell programs

Nature(2024)10.1038/s41586-024-07022-x

N/A

2.0DataRank · unranked

111 citations

Helen Kang, Shi Fang, Ramcharan Singh Angom, Vivian S. Lee, X. Rosa +22 more

An encyclopedia of enhancer-gene regulatory interactions in the human genome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.09.563812

Top 11%

1.9DataRank

Top 11%120 citations

Kristy S. Mualim, Alireza Karbalayghareh, Maya U. Sheth, Kushal K. Dey, Evelyn Jagoda +41 more

HyPR-seq: Single-cell quantification of chosen RNAs via hybridization and sequencing of DNA probes

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2010738117

N/A

1.6DataRank · unranked

44 citations

Benjamin R. Doughty, Vidya Subramanian, Philine Guckelberger, Qingbo S. Wang, Linlin M. Chen +13 more

Deciphering the impact of genomic variation on function

Nature(2024)10.1038/s41586-024-07510-0

N/A

1.1DataRank · unranked

89 citations

Jesse M. Engreitz, Heather A. Lawson, Harinder Singh, Lea M. Starita, Gary C. Hon +95 more

Multicenter integrated analysis of noncoding CRISPRi screens

Nature Methods(2024)10.1038/s41592-024-02216-7

Top 20%

1.0DataRank

Top 20%54 citations

Josh Tycko, Jin Woo Oh, Lexi R. Bounds, Sager J. Gosai, Lazaros Lataniotis +29 more

Ribosome Levels Selectively Regulate Translation and Lineage Commitment in Human Hematopoiesis

Cell(2018)10.1016/j.cell.2018.02.036

N/A

0.909DataRank · unranked

426 citations

Mathias Munschauer, Jacob C. Ulirsch, Claudia Fiorini, Leif S. Ludwig, Merry-Lynn McDonald +24 more

Leveraging polygenic enrichments of gene features to predict genes underlying complex traits and diseases

Nature Genetics(2023)10.1038/s41588-023-01443-6

N/A

0.853DataRank · unranked

293 citations

Jacob C. Ulirsch, Nathan Y. Cheng, Brian L. Trippe, Rebecca S. Fine, Jenkai Miao +23 more

Identifying disease-critical cell types and cellular processes by integrating single-cell RNA-sequencing and human genetics

Nature Genetics(2022)10.1038/s41588-022-01187-9

N/A

0.820DataRank · unranked

235 citations

Kushal K. Dey, Daniel T. Montoro, Rahul Mohan, Steven Gazal, Jesse M. Engreitz +4 more

Reduced FOXF1 links unrepaired DNA damage to pulmonary arterial hypertension

Nature Communications(2023)10.1038/s41467-023-43039-y

N/A

0.681DataRank · unranked

25 citations

Ramesh V. Nair, Helen Kang, Lingli Wang, Jan-Renier Moonen, Tsutomu Shinohara +13 more

Identifying disease-critical cell types and cellular processes across the human body by integration of single-cell profiles and human genetics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.19.436212

N/A

0.553DataRank · unranked

39 citations

Kushal K. Dey, Daniel T. Montoro, Rahul Mohan, Steven Gazal, Jesse M. Engreitz +4 more

Computational estimates of annular diameter reveal genetic determinants of mitral valve function and disease

JCI Insight(2022)10.1172/jci.insight.146580

N/A

0.425DataRank · unranked

16 citations

Catherine Tcheandjieu, Adrien Georges, Ke Xiao, Heliodoro Tejeda, Christian Dina +11 more

An Expanded Registry of Candidate cis-Regulatory Elements for Studying Transcriptional Regulation

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.26.629296

Top 45%

0.416DataRank

Top 45%12 citations

Henry Pratt, Kaili Fan, Nishigandha Phalke, Jonathan Fisher, Shaimae I. Elhajjajy +37 more

Selective Enhancer Gain-of-Function Deregulates MYC Expression in Multiple Myeloma

Cancer Research(2024)10.1158/0008-5472.can-24-1440

N/A

0.386DataRank · unranked

7 citations

Kendell Clement, Jean-Baptiste Alberge, Romanos Sklavenitis‐Pistofidis, Rohan Kodgule, Charles P. Fulco +9 more

Combining SNP-to-gene linking strategies to pinpoint disease genes and assess disease omnigenicity

medRxiv(2021)10.1101/2021.08.02.21261488

N/A

0.386DataRank · unranked

7 citations

Omer Weissbrod, Farhad Hormozdiari, Kushal K. Dey, Joseph Nasser, Karthik A. Jagadeesh +8 more

Genetic Determinants of the Interventricular Septum Are Linked to Ventricular Septal Defects and Hypertrophic Cardiomyopathy

Circulation Genomic and Precision Medicine(2023)10.1161/circgen.122.003708

N/A

0.330DataRank · unranked

8 citations

Andrew R. Harper, Matthew Aguirre, Maureen Pittman, Catherine Tcheandjieu, Dulguun Amgalan +9 more

Publisher Correction: Deep coverage whole genome sequences and plasma lipoprotein(a) in individuals of European and African ancestries

Nature Communications(2020)10.1038/s41467-020-15236-6

Top 57%

0.275DataRank

Top 57%2 citations

Sanni Ruotsalainen, Robert E. Handsaker, Maris Alver, Jonathan M. Bloom, Timothy Poterba +442 more

High Shear Stress Reduces ERG Causing Endothelial-Mesenchymal Transition and Pulmonary Arterial Hypertension

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.02.578526

N/A

0.269DataRank · unranked

5 citations

Jan-Renier Moonen, Yoon Hong Chun, Yannick C. Lee-Yow, Kenichi Okamura, Jason M. Szafron +18 more

The IGVF catalog—from genetic variation to function

Nucleic Acids Research(2025)10.1093/nar/gkaf1341

Top 63%

0.219DataRank

Top 63%3 citations

Shane Liu, Pedro Assis, Mingjie Li, Shengcheng Dong, Ian Whaling +42 more

Decoding Chromatin Dynamics in Cardiac Organoids Reveals Genetic Drivers of Human Heart Development and Disease

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.15.680997

N/A

0.104DataRank · unranked

1 citations

Ryan Zhao, Salil Deshpande, Jackson Powell, Megha Agarwal, Yuan Liu +13 more

Selective Enhancer Dependencies in MYC -Intact and MYC -Rearranged Germinal Center B-cell Diffuse Large B-cell Lymphoma

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.02.538892

N/A

0DataRank · unranked

3 citations

Aishwarya Gurumurthy, Rohan Kodgule, Athalee R. Aguilar, Travis Saari, Abdullah Ramzan +13 more

Systematic identification of genomic elements that regulateFCGR2Aexpression and harbor variants linked with autoimmune disease

Human Molecular Genetics(2021)10.1093/hmg/ddab372

N/A

0DataRank · unranked

15 citations

Charles P. Fulco, John P Ray, Thomas Liechti, Carl G. de Boer, David Lieb +5 more

Integrative approaches to improve the informativeness of deep learning models for human complex diseases

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.08.288563

N/A

0DataRank · unranked

4 citations

Samuel S. Kim, Steven Gazal, Joseph Nasser, Jesse M. Engreitz, Alkes L. Price +1 more

KLF4 recruits SWI/SNF to increase chromatin accessibility and reprogram the endothelial enhancer landscape under laminar shear stress

Nature Communications(2022)10.1038/s41467-022-32566-9

N/A

0DataRank · unranked

74 citations

James Chappell, Minyi Shi, Tsutomu Shinohara, Dan Li, Maxwell R. Mumbach +12 more

SNP-to-gene linking strategies reveal contributions of enhancer-related and candidate master-regulator genes to autoimmune disease

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.02.279059

N/A

0DataRank · unranked

9 citations

Steven Gazal, Bryce van de Geijn, Samuel S. Kim, Joseph Nasser, Jesse M. Engreitz +2 more

Genetic and functional analysis of Raynaud’s syndrome implicates loci in vasculature and immunity

Cell Genomics(2024)10.1016/j.xgen.2024.100630

N/A

0DataRank · unranked

5 citations

Markus Ramste, Erik Abner, Paul Cheng, Jacqueline M. Lane, Matthew Maher +24 more

KLF4 Recruits SWI/SNF to Increase Chromatin Accessibility and Reprogram the Endothelial Enhancer Landscape under Laminar Shear Stress

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.10.195768

N/A

0DataRank · unranked

15 citations

James Chappell, Minyi Shi, Tsutomu Shinohara, Dan Li, Maxwell R. Mumbach +11 more

Junction-targeting designs limit the application of CRISPR-Cas13d in circular RNA perturbation studies

Nucleic Acids Research(2025)10.1093/nar/gkaf1447

N/A

0DataRank · unranked

5 citations

Raeline C Valbuena, Chiara S Richter, H. Chang, Jesse M. Engreitz, Yannick C. Lee-Yow

Enhancer-targeting CRISPR screens at coronary artery disease loci suggest shared mechanisms of disease risk

medRxiv(2025)10.1101/2025.08.28.25334684

N/A

0DataRank · unranked

5 citations

Chad S. Weldy, Soumya Kundu, Quanyi Zhao, D. Li, Kayla Brand +19 more

Mapping Enhancer–Gene Interactions with Direct-Capture Targeted Perturb-seq (DC-TAP-seq) v1

(2025)10.17504/protocols.io.3byl4z7drvo5/v1

N/A

0DataRank · unranked

1 citations

Evelyn Jagoda, Dulguun Amgalan, James Galante, Chad J. Munger, Andreas R. Gschwind +12 more

Targeting RUNX1 in Macrophages Facilitates Cardiac Recovery

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.25.665779

N/A

0DataRank · unranked

0 citations

Ada Zhu, Yun-Ling Pai, Melissa Hector-Greene, Yuqian An, Kenji Rowell Kim +41 more

High Shear Stress Reduces ERG Causing Endothelial-Mesenchymal Transition and Pulmonary Arterial Hypertension

Arteriosclerosis Thrombosis and Vascular Biology(2024)10.1161/atvbaha.124.321092

N/A

0DataRank · unranked

19 citations

Jan-Renier Moonen, Yoon Hong Chun, Yannick C. Lee-Yow, Kenichi Okamura, Jason M. Szafron +19 more

Integrative single-cell analysis of cardiogenesis identifies developmental trajectories and non-coding mutations in congenital heart disease

Cell(2022)10.1016/j.cell.2022.11.028

N/A

0DataRank · unranked

107 citations

Laksshman Sundaram, Mengcheng Shen, Abhimanyu Banerjee, Soumya Kundu, Surag Nair +15 more

The epigenomic landscape of single vascular cells reflects developmental origin and identifies disease risk loci

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.18.492517

N/A

0DataRank · unranked

3 citations

Soumya Kundu, João P. Monteiro, Wenduo Gu, Albert J Pedroza, Alex R. Dalal +13 more

Genetic determinants of interventricular septal anatomy and the risk of ventricular septal defects and hypertrophic cardiomyopathy

medRxiv(2021)10.1101/2021.04.19.21255650

N/A

0DataRank · unranked

0 citations

Andrew R. Harper, Matthew Aguirre, Maureen Pittman, Catherine Tcheandjieu, Dulguun Amgalan +9 more

Compatibility logic of human enhancer and promoter sequences

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.23.462170

N/A

0DataRank · unranked

3 citations

Thouis R. Jones, Vincent Liu, Layla Siraj, Helen Kang, Joseph Nasser +7 more

Rewriting regulatory DNA to dissect and reprogram gene expression

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.20.572268

N/A

0DataRank · unranked

19 citations

Michael T. Montgomery, H. Spencer Jones, Katherine Guo, Benjamin R. Doughty, Johannes Linder +11 more

Jesse M. Engreitz

Indexed papers

Top data-sharing exemplar

Papers