Lars Eckmann

Also affiliated with University of California San Diego

Immunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 32 papers. Top paper: “Structural elucidation of recombinant Trichomonas vaginalis 20S proteasome bound to covalent inhibitors”.

Structural elucidation of recombinant Trichomonas vaginalis 20S proteasome bound to covalent inhibitors

Nature Communications(2024)10.1038/s41467-024-53022-w

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0.454DataRank · unranked

11 citations

Pavla Fajtová, Jitka Bartošová, Brianna M. Hurysz, Jehad Almaliti, Yukiko Miyamoto +5 more

Evolutionary dynamics of polyadenylation signals and their recognition strategies in protists

Genome Research(2024)10.1101/gr.279526.124

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0.104DataRank · unranked

1 citations

Danielle Y. Bilodeau, Michael A. Beer, Emma C. Horton, Yukiko Miyamoto, Katrina Velle +5 more

Identification of a Novel Susceptibility Marker for SARS-CoV-2 Infection in Human Subjects and Risk Mitigation with a Clinically Approved JAK Inhibitor in Human/Mouse Cells

Anthropos eBooks(2020)10.1101/2020.12.09.416586

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0DataRank · unranked

10 citations

Rong Hai, Li Jiang, Alina N. Santos, Tara M. Nordgren, Michel L. Tremblay +7 more

The fecal mycobiome in non-alcoholic fatty liver disease

Journal of Hepatology(2021)10.1016/j.jhep.2021.11.029

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0DataRank · unranked

186 citations

Sonja Lang, Phillipp Hartmann, Yi Duan, Anna Martin, Yukiko Miyamoto +15 more

T cell protein tyrosine phosphatase protects intestinal barrier function by restricting epithelial tight junction remodeling

Journal of Clinical Investigation(2021)10.1172/jci138230

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45 citations

Moorthy Krishnan, Marianne R. Spalinger, Taylaur W. Placone, Rocio Alvarez, Anica Sayoc-Becerra +15 more

Comprehensive characterization of purine and pyrimidine transport activities in Trichomonas vaginalis and functional cloning of a trichomonad nucleoside transporter

Molecular Microbiology(2021)10.1111/mmi.14840

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0DataRank · unranked

17 citations

Yukiko Miyamoto, Jane C. Munday, Tahani A. AlSiari, Mohammed I. Al‐Salabi, Neils B. Quashie +4 more

Microbiota Modulates Cardiac Transcriptional Responses to Intermittent Hypoxia and Hypercapnia

Frontiers in Physiology(2021)10.3389/fphys.2021.680275

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8 citations

Jin Xue, Yukiko Miyamoto, Orit Poulsen, Lars Eckmann, Gabriel G. Haddad +1 more

Apurinic/Apyrimidinic Endonuclease 1 Restricts the Internalization of Bacteria Into Human Intestinal Epithelial Cells Through the Inhibition of Rac1

Frontiers in Immunology(2021)10.3389/fimmu.2020.553994

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0DataRank · unranked

8 citations

Lindsay D. Butcher, Amber Ablack, Laura Pace, Jailal Ablack, Richard Xiong +6 more

Intestinal Transgene Delivery with Native E. coli Chassis Allows Persistent Physiological Changes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.11.468006

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2 citations

Steven D. Brown, Anand Saran, Irene Mai, Amulya Lingaraju, Nicole Siguenza +12 more

Olfactory receptor 2 in vascular macrophages drives atherosclerosis by NLRP3-dependent IL-1 production

Science(2022)10.1126/science.abg3067

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0DataRank · unranked

229 citations

Kouji Kobiyama, Holger Winkels, Yanal Ghosheh, Sara McArdle, Zbigniew Mikulski +24 more

Characterization of Metronidazole-Resistant Giardia intestinalis Lines by Comparative Transcriptomics and Proteomics

Frontiers in Microbiology(2022)10.3389/fmicb.2022.834008

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30 citations

Ulf Ribacke, Yukiko Miyamoto, Lars Eckmann, Staffan G. Svärd, Sascha Krakovka

Colesevelam ameliorates non-alcoholic steatohepatitis and obesity in mice

Hepatology International(2022)10.1007/s12072-022-10296-w

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27 citations

Yi Duan, Yukiko Miyamoto, Münevver Demir, Sonja Lang, Elda Hasa +6 more

Conserved metabolic enzymes as vaccine antigens for giardiasis

PLoS neglected tropical diseases(2022)10.1371/journal.pntd.0010323

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0DataRank · unranked

19 citations

Yukiko Miyamoto, Christine Le, Vivien N. Tran, Elaine Hanson, Marvin Fischer +3 more

Codelivery of Antigens and Adjuvant in Polymeric Nanoparticles Coated With Native Parasite Membranes Induces Protective Mucosal Immunity Against Giardia lamblia

The Journal of Infectious Diseases(2022)10.1093/infdis/jiac074

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0DataRank · unranked

15 citations

Yukiko Miyamoto, Sozaburo Ihara, Ashley V. Kroll, Noelle M Nieskens, Vivien N. Tran +5 more

A Novel Hypomorphic Apex1 Mouse Model Implicates Apurinic/Apyrimidinic Endonuclease 1 in Oxidative DNA Damage Repair in Gastric Epithelial Cells

Antioxidants and Redox Signaling(2022)10.1089/ars.2021.0119

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0DataRank · unranked

7 citations

Lindsay D. Butcher, Amber Ablack, Gerco den Hartog, Mason T. Matsubara, Hong Ly +14 more

Gnas ablation in CD11c+ cells prevents high-fat diet-induced obesity by elevating adipose tissue catecholamine levels and thermogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.27.478070

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0DataRank · unranked

0 citations

D. Scott Herdman, Jihyung Lee, Ailin Tao, Manasi Das, Samuel Bertin +10 more

PTPN2 Is a Critical Regulator of Ileal Paneth Cell Viability and Function in Mice

Cellular and Molecular Gastroenterology and Hepatology(2023)10.1016/j.jcmgh.2023.03.009

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12 citations

Marianne R. Spalinger, Rocio Alvarez, Anica Sayoc-Becerra, Golshid Sanati, Salomon Manz +11 more

Loss of cAMP Signaling in CD11c Immune Cells Protects Against Diet-Induced Obesity

Diabetes(2023)10.2337/db22-1035

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0DataRank · unranked

9 citations

D. Scott Herdman, Sung Min Lee, Ailin Tao, Manasi Das, Samuel Bertin +13 more

Antigiardial and antiamebic activities of fexinidazole and its metabolites: new drug leads for giardiasis and amebiasis

Antimicrobial Agents and Chemotherapy(2023)10.1128/aac.00731-23

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8 citations

Yukiko Miyamoto, Alejandro Delgado Aznar, Lars Eckmann, Anjan Debnath, José Ignacio Escrig-Larena

Development of subunit selective substrates for Trichomonas vaginalis proteasome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.05.535794

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0DataRank · unranked

4 citations

Brianna M. Hurysz, Yukiko Miyamoto, Mateus Sá Magalhães Serafim, Zhenze Jiang, Diego F. Trujillo +11 more

Structural elucidation of recombinant Trichomonas vaginalis 20S proteasome bound to covalent inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.17.553660

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0DataRank · unranked

2 citations

Pavla Fajtová, Jitka Bartošová, Brianna M. Hurysz, Jehad Almaliti, Yukiko Miyamoto +5 more

Distinct substrate specificities of the three catalytic subunits of the Trichomonas vaginalis proteasome

Protein Science(2024)10.1002/pro.5225

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0DataRank · unranked

8 citations

Brianna M. Hurysz, Yukiko Miyamoto, Mateus Sá Magalhães Serafim, Zhenze Jiang, Julia M. Vazquez +13 more

Mucosal vaccination in a murine gnotobiotic model of Giardia lamblia infection

Infection and Immunity(2024)10.1128/iai.00065-24

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1 citations

Brian Nguyen, Yukiko Miyamoto, Lars Eckmann, Sozaburo Ihara

Vaginal Tritrichomonas foetus infection in mice as an in vivo model for drug development against Trichomonas vaginalis

PLoS ONE(2024)10.1371/journal.pone.0308672

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1 citations

Yukiko Miyamoto, Brianna M. Hurysz, Anthony J. O’Donoghue, Lars Eckmann, Noelle M Nieskens

Intestinal Epithelial PTPN2 Limits Pathobiont Colonization by Immune-Directed Antimicrobial Responses

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.24.614848

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0DataRank · unranked

0 citations

Marianne R. Spalinger, Charly Acevedo, Casey M. Gries, Salomon Manz, Vinicius Canale +9 more

Activation of intestinal endogenous retroviruses by alcohol exacerbates liver disease

Journal of Clinical Investigation(2025)10.1172/jci188541

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0DataRank · unranked

13 citations

Marcos F. Fondevila, Wenchao Wei, Tomoo Yamazaki, Fernanda Raya Tonetti, Álvaro Eguileor +15 more

Targeted inhibition of pathobiont virulence factor mitigates alcohol-associated liver disease

Cell Host & Microbe(2025)10.1016/j.chom.2025.05.003

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12 citations

Yi Duan, Sonja Lang, Marcos F. Fondevila, David Schöler, Aenne Harberts +27 more

Tofacitinib Mitigates the Increased SARS-CoV-2 Infection Susceptibility Caused by an IBD Risk Variant in the PTPN2 Gene

Cellular and Molecular Gastroenterology and Hepatology(2025)10.1016/j.jcmgh.2024.101447

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3 citations

Golshid Sanati, Pritha Chatterjee, Rong Hai, Li Jiang, Alina N. Santos +9 more

Inhibitors of the 20S proteasome β5 subunit as potent and selective agents against Trichomonas vaginalis

Antimicrobial Agents and Chemotherapy(2025)10.1128/aac.00893-25

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1 citations

Brianna M. Hurysz, Pavla Fajtová, Peter Eckmann, Mateus Sá Magalhães Serafim, Thales Kronenberger +10 more

The compact genome of Giardia muris reveals important steps in the evolution of intestinal protozoan parasites

Microbial Genomics(2020)10.1099/mgen.0.000402

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0DataRank · unranked

41 citations

Alejandro Jiménez-González, Elin Einarsson, Ásgeir Ástvaldsson, Dimitra Peirasmaki, Lars Eckmann +4 more

Intestinal epithelial PTPN2 limits pathobiont colonization by immune-directed antimicrobial responses

Gut Microbes(2025)10.1080/19490976.2025.2559029

N/A

0DataRank · unranked

0 citations

Marianne R. Spalinger, Charly Acevedo, Alina N. Santos, Casey M. Gries, Salomon Manz +9 more

Click chemistry-facilitated comprehensive identification of proteins adducted by antimicrobial 5-nitroimidazoles for discovery of alternative drug targets against giardiasis

PLoS neglected tropical diseases(2020)10.1371/journal.pntd.0008224

N/A

0DataRank · unranked

20 citations

Yukiko Miyamoto, Sozaburo Ihara, Christine Le, Jarosław Kalisiak, Keith A. Korthals +6 more