Neil L. Kelleher

Also affiliated with Abterra Biosciences (United States), Northwestern University, Center for Human Genetics, IPM Institute of North America, Evanston Hospital

ChemistryMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

3.3Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A community resource for paired genomic and metabolomic data mining

Nature Chemical Biology(2021)10.1038/s41589-020-00724-z

Top 9%

2.5DataRank

Top 9%131 citations

Stefan Verhoeven, Lars Ridder, Florian Huber, Deepa Acharya, Alexander A. Aksenov +95 more

Papers

Driven by 113 papers — median percentile 83. Top paper: “Mutant EZH2 Induces a Pre-malignant Lymphoma Niche by Reprogramming the Immune Response”.

Mutant EZH2 Induces a Pre-malignant Lymphoma Niche by Reprogramming the Immune Response

Cancer Cell(2020)10.1016/j.ccell.2020.04.004

N/A

3.0DataRank · unranked

163 citations

Matt Teater, Cem Meydan, Kenneth B. Hoehn, Jude M. Phillip, Alexey A. Soshnev +15 more

A community resource for paired genomic and metabolomic data mining

Nature Chemical Biology(2021)10.1038/s41589-020-00724-z

Top 9%

2.5DataRank

Top 9%131 citations

Stefan Verhoeven, Lars Ridder, Florian Huber, Deepa Acharya, Alexander A. Aksenov +95 more

Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)

Nature Cell Biology(2023)10.1038/s41556-023-01194-w

N/A

2.3DataRank · unranked

175 citations

Liming Pei, Jeffrey M. Spraggins, Michael Angelo, James P. Carson, Nils Gehlenborg +95 more

Heterologous Expression of the Unusual Terreazepine Biosynthetic Gene Cluster Reveals a Promising Approach for Identifying New Chemical Scaffolds

mBio(2020)10.1128/mbio.01691-20

N/A

1.1DataRank · unranked

50 citations

Matthew T. Robey, Michael Swyers, Md. Nurul Islam, Rosa Ye, Purav P. Vagadia +7 more

SETD2 Haploinsufficiency Enhances Germinal Center–Associated AICDA Somatic Hypermutation to Drive B-cell Lymphomagenesis

Cancer Discovery(2022)10.1158/2159-8290.cd-21-1514

N/A

0.896DataRank · unranked

30 citations

Matt Teater, Ceyda Durmaz, Cem Meydan, Alexandra G. Chivu, Amy Chadburn +14 more

Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage

Nature Methods(2025)10.1038/s41592-024-02563-5

Top 25%

0.802DataRank

Top 25%33 citations

Philip D. Blood, Jonathan C. Silverstein, Matthew Ruffalo, Rahul Satija, Sarah A. Teichmann +95 more

SPT5 stabilization of promoter-proximal RNA polymerase II

Molecular Cell(2021)10.1016/j.molcel.2021.08.006

N/A

0.706DataRank · unranked

110 citations

Yoh-hei Takahashi, Avani P. Shah, Marta Iwanaszko, Emily J. Rendleman, Nabiha Khan +6 more

In the fungus where it happens: History and future propelling Aspergillus nidulans as the archetype of natural products research

Fungal Genetics and Biology(2020)10.1016/j.fgb.2020.103477

N/A

0.628DataRank · unranked

65 citations

Neil L. Kelleher, Nancy P. Keller, Lindsay K. Caesar

π-HuB: the proteomic navigator of the human body

Nature(2024)10.1038/s41586-024-08280-5

N/A

0.581DataRank · unranked

47 citations

Ruedi Aebersold, Mark S. Baker, Xiu‐Wu Bian, Xiaochen Bo, Daniel W. Chan +95 more

Elevated N-Linked Glycosylation of IgG V Regions in Myasthenia Gravis Disease Subtypes

The Journal of Immunology(2021)10.4049/jimmunol.2100225

N/A

0.500DataRank · unranked

27 citations

Miriam L. Fichtner, Ruoyi Jiang, Valerie J. Winton, Sara E. Vazquez, Minh Pham +8 more

New Interface for Faster Proteoform Analysis: Immunoprecipitation Coupled with SampleStream-Mass Spectrometry

Journal of the American Society for Mass Spectrometry(2021)10.1021/jasms.1c00026

N/A

0.477DataRank · unranked

23 citations

Hae-Min Park, Cameron Lloyd-Jones, Rafael D. Melani, Jeannie M. Camarillo, John T. Wilkins +3 more

Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging

Nature Methods(2021)10.1038/s41592-021-01316-y

N/A

0.470DataRank · unranked

22 citations

Elizabeth K. Neumann, Andrea J. Radtke, Jeannie M. Camarillo, Rebecca T. Beuschel, Alexandre Albanese +19 more

Epi-microRNA mediated metabolic reprogramming counteracts hypoxia to preserve affinity maturation

Nature Communications(2024)10.1038/s41467-024-54937-0

N/A

0.461DataRank · unranked

11 citations

Miriam Llorian, Sunita Varsani-Brown, Probir Chakravarty, Jeannie M. Camarillo, David J. Barry +8 more

Reassembling protein complexes after controlled disassembly by top-down mass spectrometry in native mode

International Journal of Mass Spectrometry(2021)10.1016/j.ijms.2021.116591

N/A

0.442DataRank · unranked

18 citations

Denise P. Tran, Alexander S. Lee, John P. McGee, Kevin Jooß, Kenneth R. Durbin +9 more

Automated Immunoprecipitation, Sample Preparation, and Individual Ion Mass Spectrometry Platform for Proteoforms

Analytical Chemistry(2024)10.1021/acs.analchem.4c01962

N/A

0.292DataRank · unranked

6 citations

John P. McGee, Michael A. R. Hollas, Eleonora Forte, Ryan T. Fellers, Rafael D. Melani +5 more

Nucleosome context regulates chromatin reader preference

Nucleic Acids Research(2025)10.1093/nar/gkaf1061

N/A

0.269DataRank · unranked

5 citations

Irina K Popova, Nathan W Hall, Anup Vaidya, James R. Bone, Brandon A. Boone +41 more

Target Identification of a Class of Pyrazolone Protein Aggregation Inhibitor Therapeutics for Amyotrophic Lateral Sclerosis

ACS Central Science(2023)10.1021/acscentsci.3c00213

N/A

0.269DataRank · unranked

5 citations

Isaac T. Schiefer, Pedro Soares, Susan G. Fox, Richard I. Morimoto, Rafael D. Melani +4 more

Direct Imaging and Identification of Proteoforms up to 70 kDa from Human Tissue

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.07.471638

N/A

0.241DataRank · unranked

4 citations

John P. McGee, Kenneth R. Durbin, Michael A. R. Hollas, Manxi Yang, Elizabeth K. Neumann +12 more

Immunocomplexed Antigen Capture and Identification by Native Top-Down Mass Spectrometry

Journal of the American Society for Mass Spectrometry(2023)10.1021/jasms.3c00235

N/A

0.208DataRank · unranked

3 citations

Rafael D. Melani, Ben Des Soye, Derek Croote, Valerie J. Winton, Stephen R. Quake +3 more

Native top-down proteomics reveals EGFR–ERα signaling crosstalk in breast cancer cells dissociates NUTF2 dimers to modulate ERα signaling and cell growth

Research Square(2023)10.21203/rs.3.rs-3097806/v1

N/A

0.208DataRank · unranked

3 citations

Fábio Pereira Gomes, Kenneth R. Durbin, Kevin L. Schauer, J.C. Nwachukwu, Robin Russo +10 more

Top-down mass spectrometry of native proteoforms and their complexes: A community study

Research Square(2023)10.21203/rs.3.rs-3228472/v1

N/A

0.165DataRank · unranked

2 citations

Tanja Habeck, Kyle A. Brown, Benjamin J. Des Soye, Carter Lantz, Mowei Zhou +17 more

Top-Down Proteomics Identifies Plasma Proteoform Signatures of Liver Cirrhosis Progression

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.19.599662

N/A

0.165DataRank · unranked

2 citations

Jes M. Sanders, Indira Plá, Vijaya Lakshmi Kanchustambham, Michael A. R. Hollas, Che‐Fan Huang +10 more

Remarkable and Unexpected Mechanism for (S)-3-Amino-4-(difluoromethylenyl)cyclohex-1-ene-1-carboxylic Acid as a Selective Inactivator of Human Ornithine Aminotransferase

Journal of the American Chemical Society(2021)10.1021/jacs.1c03572

N/A

0DataRank · unranked

16 citations

Peter F. Doubleday, Arseniy Butrin, Pathum M. Weerawarna, Rafael D. Melani, Daniel S. Catlin +5 more

Precise Characterization of KRAS4B Proteoforms by Combining Immunoprecipitation with Top-Down Mass Spectrometry

Methods in molecular biology(2021)10.1007/978-1-0716-1190-6_3

N/A

0DataRank · unranked

11 citations

Caroline J. DeHart, Neil L. Kelleher, Lauren Adams

Characterization of a Copper-Chelating Natural Product from the Methanotroph Methylosinus sp. LW3

Biochemistry(2021)10.1021/acs.biochem.1c00443

N/A

0DataRank · unranked

11 citations

Gerri M. Roberts, Rana Montaser, Grace E. Kenney, Paul M. Thomas, Neil L. Kelleher +2 more

Multiplexed Mass Spectrometry of Individual Ions Improves Measurement of Proteoforms and Their Complexes

Research Square(2021)10.21203/rs.3.pex-820/v1

N/A

0DataRank · unranked

10 citations

Rafael D. Melani, Kenneth R. Durbin, Bon Ikwuagwu, Bryan P. Early, Ryan T. Fellers +11 more

Proteoform-selective imaging of tissues using mass spectrometry

(2021)10.33774/chemrxiv-2021-wtjm2

N/A

0DataRank · unranked

7 citations

Hang Hu, Pei Su, Paul M. Thomas, Jeannie M. Camarillo, Joseph B. Greer +5 more

Proteoform-selective imaging of tissues using mass spectrometry

ChemRxiv(2021)10.26434/chemrxiv-2021-wtjm2

N/A

0DataRank · unranked

4 citations

Hang Hu, Pei Su, Paul M. Thomas, Jeannie M. Camarillo, Joseph B. Greer +5 more

Putting Humpty Dumpty Back Together Again: What Does Protein Quantification Mean in Bottom-Up Proteomics?

Journal of Proteome Research(2022)10.1021/acs.jproteome.1c00894

N/A

0DataRank · unranked

94 citations

Lukas Käll, Bobbie‐Jo Webb‐Robertson, Lisa Bramer, Ashley N. Ives, Neil L. Kelleher +5 more

SPT6 functions in transcriptional pause/release via PAF1C recruitment

Molecular Cell(2022)10.1016/j.molcel.2022.06.037

N/A

0DataRank · unranked

71 citations

Avani P. Shah, Sheetal Ganesan, Shimaa Soliman, Byoung-Kyu Cho, Young Ah Goo +3 more

A mixed-valent Fe(II)Fe(III) species converts cysteine to an oxazolone/thioamide pair in methanobactin biosynthesis

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2123566119

N/A

0DataRank · unranked

46 citations

Richard J. Jodts, Jeffrey W. Slater, Reyvin M. Reyes, Valerie J. Winton, Rana Montaser +9 more

Mapping the KRAS proteoform landscape in colorectal cancer identifies truncated KRAS4B that decreases MAPK signaling

Journal of Biological Chemistry(2022)10.1016/j.jbc.2022.102768

N/A

0DataRank · unranked

37 citations

Caroline J. DeHart, Bryon Drown, Lissa C. Anderson, William Bocik, Emily S. Boja +7 more

New Views of Old Proteins: Clarifying the Enigmatic Proteome

Molecular & Cellular Proteomics(2022)10.1016/j.mcpro.2022.100254

N/A

0DataRank · unranked

36 citations

Thomas P. Conrads, Richard R. Drake, Amy E. Herr, Ravi Iyengar, Ryan T. Kelly +15 more

Bulk IgG glycosylation predicts COVID-19 severity and vaccine antibody response

Cell Reports(2022)10.1016/j.celrep.2022.111799

N/A

0DataRank · unranked

28 citations

Pavan Bhimalli, Byoung-Kyu Cho, Basil Baby Mattamana, Stéphanie Gambut, Imad Tarhoni +16 more

C16orf72/HAPSTR1 is a molecular rheostat in an integrated network of stress response pathways

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2111262119

N/A

0DataRank · unranked

24 citations

Daniel J. Ansel, Kyle Metz, Roger S. Smith, Claire M. Phoumyvong, Sitaram Gayatri +14 more

Automated Control of Injection Times for Unattended Acquisition of Multiplexed Individual Ion Mass Spectra

Analytical Chemistry(2022)10.1021/acs.analchem.2c03495

N/A

0DataRank · unranked

23 citations

Michael W. Senko, Kevin Jooß, Benjamin J. Des Soye, Philip D. Compton, Neil L. Kelleher +2 more

Revving an Engine of Human Metabolism: Activity Enhancement of Triosephosphate Isomerase via Hemi-Phosphorylation

ACS Chemical Biology(2022)10.1021/acschembio.2c00324

N/A

0DataRank · unranked

19 citations

Benjamin J. Des Soye, Soo Y. Ro, Grace E. Kenney, Ashley N. Ives, Taojunfeng Su +5 more

Middle-Down Mass Spectrometry Reveals Activity-Modifying Phosphorylation Barcode in a Class C G Protein-Coupled Receptor

Journal of the American Chemical Society(2022)10.1021/jacs.2c10697

N/A

0DataRank · unranked

17 citations

Henry A. Dunn, Hamid Samareh Afsari, Henrique S. Seckler, Max J. Foroutan, Erica Chavez +8 more

Venom characterization of the Brazilian Pampa snake Bothrops pubescens by top-down and bottom-up proteomics

Toxicon(2022)10.1016/j.toxicon.2022.106937

N/A

0DataRank · unranked

6 citations

Rafael D. Melani, Evelise Leis Carvalho, Juliano Tomazzoni Boldo, Tiágo Gomes dos Santos, Neil L. Kelleher +2 more

An Essential Role for Alzheimer’s-Linked Amyloid Beta Oligomers in Neurodevelopment: Transient Expression of Multiple Proteoforms during Retina Histogenesis

International Journal of Molecular Sciences(2022)10.3390/ijms23042208

N/A

0DataRank · unranked

12 citations

Madison T. Proctor, Hongjie Xia, Evelyn Y. Ho, Dong Sik Kang, Kristen H. Schuster +8 more

ProSight Annotator: Complete control and customization of protein entries in UniProt XML files

PROTEOMICS(2022)10.1002/pmic.202100209

N/A

0DataRank · unranked

9 citations

Bryan P. Early, Kenneth R. Durbin, Steven M. Patrie, Paul M. Thomas, Neil L. Kelleher +3 more

Proteoform-selective imaging of tissues using mass spectrometry

(2022)10.33774/chemrxiv-2021-wtjm2-v2

N/A

0DataRank · unranked

5 citations

Hang Hu, Pei Su, Paul M. Thomas, Jeannie M. Camarillo, Joseph B. Greer +5 more

Proteomics Standards Initiative’s ProForma 2.0: Unifying the Encoding of Proteoforms and Peptidoforms

Journal of Proteome Research(2022)10.1021/acs.jproteome.1c00771

N/A

0DataRank · unranked

0 citations

Eric W. Deutsch, Pierre‐Alain Binz, Ryan T. Fellers, Anthony J. Cesnik, Joshua Klein +13 more

Mapping the Proteoform Landscape of Five Human Tissues

ChemRxiv(2022)10.26434/chemrxiv-2022-svlqz

N/A

0DataRank · unranked

0 citations

Kevin Jooß, Rafael D. Melani, Cameron Lloyd-Jones, Jeannie M. Camarillo, Neil L. Kelleher +1 more

Adaptation of Native GELFrEE for HDL Particle Size Subtype Separation and Differential Apolipoprotein Proteoform Quantification

The FASEB Journal(2022)10.1096/fasebj.2022.36.s1.0r319

N/A

0DataRank · unranked

0 citations

Cameron Lloyd‐Jones, Henrique S. Seckler, Philip D. Compton, Allan D. Sniderman, Neil L. Kelleher +2 more

Proteoform-selective imaging of tissues using mass spectrometry

ChemRxiv(2022)10.26434/chemrxiv-2021-wtjm2-v2

N/A

0DataRank · unranked

0 citations

Hang Hu, Pei Su, Paul M. Thomas, Jeannie M. Camarillo, Joseph B. Greer +5 more

Correlative metabologenomics of 110 fungi reveals metabolite–gene cluster pairs

Nature Chemical Biology(2023)10.1038/s41589-023-01276-8

N/A

0DataRank · unranked

54 citations

Fatma Ayaloglu Butun, Matthew T. Robey, Navid J. Ayon, Raveena Gupta, David Dainko +12 more

Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging

Nature Methods(2023)10.1038/s41592-023-01846-7

N/A

0DataRank · unranked

45 citations

Diane C. Saunders, Elizabeth McDonough, John W. Hickey, Christopher Werlein, Christine Surrette +33 more

Identification of Splice Variants and Isoforms in Transcriptomics and Proteomics

Annual Review of Biomedical Data Science(2023)10.1146/annurev-biodatasci-020722-044021

N/A

0DataRank · unranked

35 citations

Michael A. R. Hollas, Ryan T. Fellers, Neil L. Kelleher, Taojunfeng Su

Automated imaging and identification of proteoforms directly from ovarian cancer tissue

Nature Communications(2023)10.1038/s41467-023-42208-3

N/A

0DataRank · unranked

30 citations

Pei Su, Kenneth R. Durbin, Michael A. R. Hollas, Nicholas W. Bateman, G. Larry Maxwell +7 more

Sperm chromatin structure and reproductive fitness are altered by substitution of a single amino acid in mouse protamine 1

Nature Structural & Molecular Biology(2023)10.1038/s41594-023-01033-4

N/A

0DataRank · unranked

28 citations

Samantha B. Schon, Mashiat Rabbani, Yi Sheng, Ritvija Agrawal, Juniper Glass-Klaiber +16 more

Determining Collisional Cross Sections from Ion Decay with Individual Ion Mass Spectrometry

Journal of the American Society for Mass Spectrometry(2023)10.1021/jasms.3c00340

N/A

0DataRank · unranked

10 citations

John P. McGee, K. P. Bowen, Michael Goodwin, Michael W. Senko, Neil L. Kelleher +2 more

Advancing Intact Protein Quantitation with Updated Deconvolution Routines

Analytical Chemistry(2023)10.1021/acs.analchem.3c02345

N/A

0DataRank · unranked

6 citations

D. Utley, Joseph B. Greer, Ryan T. Fellers, Neil L. Kelleher, Kenneth R. Durbin +1 more

Mass spectrometry-based proteomics for advancing solid organ transplantation research

Frontiers in Transplantation(2023)10.3389/frtra.2023.1286881

N/A

0DataRank · unranked

9 citations

Pei Su, Troy D. Fisher, Josh Levitsky, Neil L. Kelleher, Eleonora Forte +1 more

Parsing 20 Years of Public Data by AI Maps Trends in Proteomics and Forecasts Technology

Journal of Proteome Research(2023)10.1021/acs.jproteome.3c00430

N/A

0DataRank · unranked

4 citations

C. I. Grimm, Andre Fristo, Joseph Byrum, Neil L. Kelleher, Josiah J. Green

Structural and Mechanistic Basis for the Inactivation of Human Ornithine Aminotransferase by (3S,4S)-3-Amino-4-fluorocyclopentenecarboxylic Acid

Molecules(2023)10.3390/molecules28031133

N/A

0DataRank · unranked

1 citations

Arseniy Butrin, Brett A. Beaupre, Gláucio Monteiro Ferreira, Peter F. Doubleday, Daniel Grass +6 more

Top-down Proteomics of 10,000 Single Brain Cells

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.31.543176

N/A

0DataRank · unranked

11 citations

Michael A. R. Hollas, Stanislav S. Rubakhin, Fatma Ayaloglu Butun, Joseph B. Greer, Bryan P. Early +6 more

MSModDetector: A Tool for Detecting Mass Shifts and Post-Translational Modifications in Individual Ion Mass Spectrometry Data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.06.543961

N/A

0DataRank · unranked

2 citations

Ryan T. Fellers, Dan Lü, Bryon Drown, Ashwini Jambhekar, Galit Lahav +3 more

Targeted Quantification of Proteoforms in Complex Samples by Proteoform Reaction Monitoring

ChemRxiv(2023)10.26434/chemrxiv-2023-g5986

N/A

0DataRank · unranked

2 citations

Jake Kline, Fernanda Negrão, Matthew T. Robey, Timothy K. Toby, Kenneth R. Durbin +8 more

The Human Proteoform Project: Defining the human proteome

Zenodo (CERN European Organization for Nuclear Research)(2023)10.1126/sciadv.abk07

N/A

0DataRank · unranked

0 citations

Jeffrey N. Agar, Julia Chamot‐Rooke, Paul O. Danis, Ying Ge, Joseph A. Loo +5 more

Terpenoid balance in Aspergillus nidulans unveiled by heterologous squalene synthase expression

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.20.563295

N/A

0DataRank · unranked

0 citations

Breanne N. Steffan, Fang Yun Lim, Raveena Gupta, Fatma Ayaloglu Butun, Hongyu Chen +7 more

Top-down mass spectrometry of native proteoforms and their complexes: a community study

Nature Methods(2024)10.1038/s41592-024-02279-6

N/A

0DataRank · unranked

39 citations

Kyle A. Brown, Benjamin J. Des Soye, Carter Lantz, Mowei Zhou, Novera Alam +17 more

Single Cell Analysis of Proteoforms

Journal of Proteome Research(2024)10.1021/acs.jproteome.4c00075

N/A

0DataRank · unranked

28 citations

Michael A. R. Hollas, Fatma Ayaloglu Butun, Kanchustambham Vijayalakshmi, Stanislav S. Rubakhin, Namrata Ramani +8 more

Targeted Quantification of Proteoforms in Complex Samples by Proteoform Reaction Monitoring

Analytical Chemistry(2024)10.1021/acs.analchem.3c05578

N/A

0DataRank · unranked

26 citations

Jake Kline, Fernanda Negrão, Matthew T. Robey, Timothy K. Toby, Kenneth R. Durbin +8 more

A multi-iron enzyme installs copper-binding oxazolone/thioamide pairs on a nontypeable Haemophilus influenzae virulence factor

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2408092121

N/A

0DataRank · unranked

23 citations

Tucker J. Shriver, Tian Xu, Isaac A. Melendrez, Philip M. Palacios, Scott A. Robson +5 more

Top-Down Proteomics Identifies Plasma Proteoform Signatures of Liver Cirrhosis Progression

Molecular & Cellular Proteomics(2024)10.1016/j.mcpro.2024.100876

N/A

0DataRank · unranked

15 citations

Jes M. Sanders, Indira Plá, Kanchustambham Vijayalakshmi, Michael A. R. Hollas, Che‐Fan Huang +10 more

Precise Readout of MEK1 Proteoforms upon MAPK Pathway Modulation by Individual Ion Mass Spectrometry

Analytical Chemistry(2024)10.1021/acs.analchem.3c04758

N/A

0DataRank · unranked

11 citations

Raveena Gupta, John P. McGee, Michael A. R. Hollas, Paul J. Hergenrother, Jared O. Kafader +2 more

Bioactivity-driven fungal metabologenomics identifies antiproliferative stemphone analogs and their biosynthetic gene cluster

Metabolomics(2024)10.1007/s11306-024-02153-8

N/A

0DataRank · unranked

10 citations

Cody E. Earp, Raveena Gupta, Fatma Ayaloglu Butun, Ashley E. Clements, Alexa G. Lee +15 more

Top-Down Stability of Proteins from Rates of Oxidation (TD-SPROX) Approach for Measuring Proteoform-Specific Folding Stability

Analytical Chemistry(2024)10.1021/acs.analchem.4c04469

N/A

0DataRank · unranked

8 citations

Che‐Fan Huang, Grace R. Sturrock, Neil L. Kelleher, Michael C. Fitzgerald, Zou You

Terpenoid balance in Aspergillus nidulans unveiled by heterologous squalene synthase expression

Science Advances(2024)10.1126/sciadv.adk7416

N/A

0DataRank · unranked

7 citations

Breanne N. Steffan, Fang Yun Lim, Raveena Gupta, Fatma Ayaloglu Butun, Hongyu Chen +7 more

Design, Synthesis, and Mechanistic Studies of (R)-3-Amino-5,5-difluorocyclohex-1-ene-1-carboxylic Acid as an Inactivator of Human Ornithine Aminotransferase

ACS Chemical Biology(2024)10.1021/acschembio.4c00022

N/A

0DataRank · unranked

6 citations

Abigail L. Vargas, Wei Zhu, Benjamin J. Des Soye, Fatma Ayaloglu Butun, Tyler B. Alt +7 more

Characterization of the Antibody Response to SARS-CoV-2 Infection in COVID-19 Transplant versus Nontransplant Recipients by Ig-MS

Journal of Proteome Research(2024)10.1021/acs.jproteome.4c00285

N/A

0DataRank · unranked

1 citations

Rafael D. Melani, Michael A. R. Hollas, Jiana Duan, Steven M. Patrie, Troy D. Fisher +7 more

MSModDetector: a tool for detecting mass shifts and post-translational modifications in individual ion mass spectrometry data

Bioinformatics(2024)10.1093/bioinformatics/btae335

N/A

0DataRank · unranked

3 citations

Ryan T. Fellers, Dan Lü, Bryon Drown, Ashwini Jambhekar, Galit Lahav +3 more

Short-chain fatty acid metabolites propionate and butyrate are unique epigenetic regulatory elements linking diet, metabolism and gene expression

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.11.575111

N/A

0DataRank · unranked

5 citations

Joshua J. Gruber, Benjamin S. Geller, Faye Chleilat, Samuel M. Lancaster, Shannon M. White +6 more

Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)

UNC Libraries(2024)10.17615/57gg-2n56

N/A

0DataRank · unranked

0 citations

Louise C. Laurent, Neil L. Kelleher, Huiping Liu, Weijun Qian, Mowei Zhou +21 more

Short-chain fatty acid metabolites propionate and butyrate are unique epigenetic regulatory elements linking diet, metabolism and gene expression

Nature Metabolism(2025)10.1038/s42255-024-01191-9

N/A

0DataRank · unranked

124 citations

Joshua J. Gruber, Benjamin S. Geller, Faye Chleilat, Samuel M. Lancaster, Shannon M. White +6 more

The Proteoform Landscape of Tau from the Human Brain

Journal of Proteome Research(2025)10.1021/acs.jproteome.5c00139

N/A

0DataRank · unranked

17 citations

Taojunfeng Su, Benjamin J. Des Soye, Soumya Kandi, Che‐Fan Huang, John T. Wilkins +6 more

A needed nomenclature for nucleosomes

Molecular Cell(2025)10.1016/j.molcel.2025.08.029

N/A

0DataRank · unranked

12 citations

Geneviève Almouzni, Andrew J. Andrews, Karim-Jean Armache, C.H. Arrowsmith, Sung Hee Baek +33 more

Intact Proteoform Analysis by Capillary Electrophoresis–Mass Spectrometry. Are We There Yet?

Angewandte Chemie International Edition(2025)10.1002/anie.202518366

N/A

0DataRank · unranked

6 citations

Qianjie Wang, Jeffrey N. Agar, Jennifer S. Brodbelt, Daoyang Chen, Kellye A. Cupp‐Sutton +29 more

A Robust and Automated Platform for Charge Detection Mass Spectrometry of Megadalton Biotherapeutics

Analytical Chemistry(2025)10.1021/acs.analchem.4c06397

N/A

0DataRank · unranked

7 citations

Ryan T. Fellers, Shannon A. Raab, Michael P. Goodwin, K. P. Bowen, Zhirui Lian +6 more

Blocking C-terminal processing of KRAS4b via a direct covalent attack on the CaaX-box cysteine

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2410766122

N/A

0DataRank · unranked

6 citations

Yue Yang, Alok K. Sharma, David M. Turner, Caroline J. DeHart, Hazem Abdelkarim +29 more

Intact Mass Profiling Reveals Phospho‐Proteoforms of the Catenins (85–110 kDa) Regulated by Actomyosin Contractility

Angewandte Chemie International Edition(2025)10.1002/anie.202518593

N/A

0DataRank · unranked

2 citations

Taojunfeng Su, Annette S. Flozak, Cara J. Gottardi, Neil L. Kelleher, Che‐Fan Huang

Wavelength Dependence of Intact Protein Extraction Using Femtosecond Laser Ablation

The Journal of Physical Chemistry Letters(2025)10.1021/acs.jpclett.5c01440

N/A

0DataRank · unranked

1 citations

Khaled Madhoun, Pei Su, Samuel E. Janisse, Jessica E. Besaw, Harmanjot Grewal +5 more

Next-Generation Protein Sequencing and individual ion mass spectrometry enable complementary analysis of interleukin-6

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.07.637157

N/A

0DataRank · unranked

3 citations

Troy D. Fisher, Andrew Lee, Taojunfeng Su, Eleonora Forte, Aniel Sánchez +3 more

Nucleosome context regulates chromatin reader preference

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.29.651129

N/A

0DataRank · unranked

3 citations

Irina K Popova, Nathan W Hall, Anup Vaidya, James R. Bone, Brandon A. Boone +40 more

Direct Readout of Multivalent Chromatin Reader-Nucleosome Interactions by Nucleosome Mass Spectrometry

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.01.651740

N/A

0DataRank · unranked

3 citations

Nickolas P. Fisher, Matthew R. Marunde, Pei Su, Laiba F Khan, Bria Graham +14 more

Capillary Zone Electrophoresis-Mass Spectrometry of Intact G Protein-Coupled Receptors Enables Proteoform Profiling

ChemRxiv(2025)10.26434/chemrxiv-2025-t2dr4

N/A

0DataRank · unranked

0 citations

Kevin Jooß, Rafael D. Melani, Ryan T. Fellers, John Janetzko, Neil L. Kelleher +1 more

Elevated neuroinflammation, autoimmunity, and altered IgG glycosylation profile in the cerebral spinal fluid of severe COVID-19 patients

Brain Behavior and Immunity(2025)10.1016/j.bbi.2025.03.031

N/A

0DataRank · unranked

0 citations

Pavan Bhimalli, Samantha J. Welninski, Byoung-Kyu Cho, Basil Baby Mattamana, Jaison Arivalagan +13 more

Top-Down Individual Ion Mass Spectrometry Reveals 85-110 kDa Catenin Phospho-Proteoforms Regulated by Actomyosin Contractility

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.06.674621

N/A

0DataRank · unranked

0 citations

Taojunfeng Su, Annette S. Flozak, Cara J. Gottardi, Neil L. Kelleher, Che‐Fan Huang

Direct Extraction and Ionization of Intact Proteins from Aqueous Environment Using Desorption by Impulsive Vibrational Excitation.

ChemRxiv(2025)10.26434/chemrxiv-2025-gj685

N/A

0DataRank · unranked

0 citations

Alexander Wainwright, Samuel E. Janisse, Jared O. Kafader, Neil L. Kelleher, Pei Su +2 more

Multiplexed mass spectrometry of individual ions improves measurement of proteoforms and their complexes

Nature Methods(2020)10.1038/s41592-020-0764-5

N/A

0DataRank · unranked

196 citations

Rafael D. Melani, Kenneth R. Durbin, Bon Ikwuagwu, Bryan P. Early, Ryan T. Fellers +11 more

Automated Enzymatic Deglycosylation of Monoclonal Antibody with the SampleStream Platform

Journal of the American Society for Mass Spectrometry(2025)10.1021/jasms.5c00242

N/A

0DataRank · unranked

0 citations

Philip D. Compton, Matthew T. Robey, Ryan T. Fellers, Kenneth R. Durbin, Neil L. Kelleher +1 more

Histone H1 loss drives lymphoma by disrupting 3D chromatin architecture

Nature(2020)10.1038/s41586-020-3017-y

N/A

0DataRank · unranked

267 citations

Andreas Kloetgen, Matt Teater, Adewola Osunsade, Jeannie M. Camarillo, Christopher R. Chin +24 more

Interlaboratory Study for Characterizing Monoclonal Antibodies by Top-Down and Middle-Down Mass Spectrometry

Journal of the American Society for Mass Spectrometry(2020)10.1021/jasms.0c00036

N/A

0DataRank · unranked

128 citations

Luca Fornelli, Yury O. Tsybin, Joseph A. Loo, Henrique S. Seckler, Jeffrey N. Agar +55 more

NMT1 and NMT2 are lysine myristoyltransferases regulating the ARF6 GTPase cycle

Nature Communications(2020)10.1038/s41467-020-14893-x

N/A

0DataRank · unranked

108 citations

Ian R. Price, Xiaoyu Zhang, Cheng‐Liang Zhu, Kayla N. Johnson, Shuai Zhang +9 more

Isotopic Resolution of Protein Complexes up to 466 kDa Using Individual Ion Mass Spectrometry

Analytical Chemistry(2020)10.1021/acs.analchem.0c03282

N/A

0DataRank · unranked

59 citations

Rafael D. Melani, Ping Yip, Michael W. Senko, Philip D. Compton, Jared O. Kafader +2 more

Mechanism-Based Design of 3-Amino-4-Halocyclopentenecarboxylic Acids as Inactivators of GABA Aminotransferase

ACS Medicinal Chemistry Letters(2020)10.1021/acsmedchemlett.9b00672

N/A

0DataRank · unranked

12 citations

Peter F. Doubleday, Pathum M. Weerawarna, Wei Zhu, Neil L. Kelleher, Richard B. Silverman +1 more

Genome Mining and Metabolomics Uncover a Rare d-Capreomycidine Containing Natural Product and Its Biosynthetic Gene Cluster

ACS Chemical Biology(2020)10.1021/acschembio.0c00663

N/A

0DataRank · unranked

11 citations

Jennifer C. Rote, Li Chen, Matthew T. Robey, Marvin M. Vega, Wan Cheng Phua +5 more

Should LC-MS/MS Be the Reference Measurement Procedure to Determine Protein Concentrations in Human Samples?

Clinical Chemistry(2020)10.1093/clinchem/hvaa256

N/A

0DataRank · unranked

25 citations

Christa M. Cobbaert, Vincent Delatour, Neil L. Kelleher, Mark S. Lowenthal, Christopher M. Shuford +1 more

Targeted detection and quantitation of histone modifications from 1,000 cells

PLoS ONE(2020)10.1371/journal.pone.0240829

N/A

0DataRank · unranked

6 citations

Jacek Sikora, Jeannie M. Camarillo, Juliette A. Morris, Philip D. Compton, Tak Lee +12 more

The Human Proteoform Project: A Plan to Define the Human Proteome

Preprints.org(2020)10.20944/preprints202010.0368.v1

N/A

0DataRank · unranked

15 citations

Jeffrey N. Agar, Julia Chamot‐Rooke, Paul O. Danis, Ying Ge, Joseph A. Loo +4 more

Decoding the Protein Composition of Whole Nucleosomes with Nuc-MS

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.08.287656

N/A

0DataRank · unranked

7 citations

Kevin Jooβ, Marc A. Morgan, Andrea Piunti, Matthew J. Meiners, Alexander Lee +9 more

Standard Procedures for Native CZE-MS of Proteins and Protein Complexes up to 800 kDa

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.02.351247

N/A

0DataRank · unranked

1 citations

John P. McGee, Rafael D. Melani, Neil L. Kelleher, Kevin Jooß

Separation and Characterization of Endogenous Nucleosomes by Native Capillary Zone Electrophoresis – Top-Down Mass Spectrometry (nCZE-TDMS)

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.25.398925

N/A

0DataRank · unranked

0 citations

Luis F. Schachner, Rachel Watson, Zachary B Gillespie, Sarah A. Howard, Marcus A. Cheek +5 more

Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation

UNC Libraries(2020)10.17615/23g9-an88

N/A

0DataRank · unranked

0 citations

Takamitsu Hattori, Irina Dementieva, Kohei Kurosawa, Adrian T. Grzybowski, Yupeng Zheng +10 more

The emerging landscape of single-molecule protein sequencing technologies

Nature Methods(2021)10.1038/s41592-021-01143-1

N/A

0DataRank · unranked

365 citations

Peggy R. Bohländer, Mingjie Dai, Mike Filius, Cecil J. Howard, Xander F. van Kooten +38 more

The Human Proteoform Project: Defining the human proteome

Science Advances(2021)10.1126/sciadv.abk0734

N/A

0DataRank · unranked

244 citations

Jeffrey N. Agar, Julia Chamot‐Rooke, Paul O. Danis, Ying Ge, Joseph A. Loo +4 more

Decoding the protein composition of whole nucleosomes with Nuc-MS

Nature Methods(2021)10.1038/s41592-020-01052-9

N/A

0DataRank · unranked

67 citations

Kevin Jooß, Marc A. Morgan, Andrea Piunti, Matthew J. Meiners, Jared O. Kafader +9 more

Deeper Protein Identification Using Field Asymmetric Ion Mobility Spectrometry in Top-Down Proteomics

Analytical Chemistry(2021)10.1021/acs.analchem.1c00402

N/A

0DataRank · unranked

58 citations

Rafael D. Melani, Susan E. Abbatiello, Michael W. Belford, Romain Huguet, John P. McGee +4 more

Separation and Characterization of Endogenous Nucleosomes by Native Capillary Zone Electrophoresis–Top-Down Mass Spectrometry

Analytical Chemistry(2021)10.1021/acs.analchem.0c04975

N/A

0DataRank · unranked

42 citations

Luis F. Schachner, Rachel Watson, Zachary B Gillespie, Sarah A. Howard, Marcus A. Cheek +6 more

Standard procedures for native CZE‐MS of proteins and protein complexes up to 800 kDa

Electrophoresis(2021)10.1002/elps.202000317

N/A

0DataRank · unranked

39 citations

John P. McGee, Rafael D. Melani, Neil L. Kelleher, Kevin Jooß

Next-Generation Serology by Mass Spectrometry: Readout of the SARS-CoV-2 Antibody Repertoire

Journal of Proteome Research(2021)10.1021/acs.jproteome.1c00882

N/A

0DataRank · unranked

25 citations

Benjamin J. Des Soye, Jared O. Kafader, Eleonora Forte, Michael A. R. Hollas, Voislav Blagojevic +21 more

Oncogenic KRAS creates an aspartate metabolism signature in colorectal cancer cells

FEBS Journal(2021)10.1111/febs.16111

N/A

0DataRank · unranked

20 citations

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