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Authors
Yun Li

Yun Li

University of North Carolina at Chapel Hill

ORCID: 0000-0002-9275-4189

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

32.1Author DataRank

Indexed papers

17in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 17 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A global reference for human genetic variation

Nature(2015)10.1038/nature15393

Top 1%

10.6DataRank

Top 1%20166 citations

Gonçalo R. Abecasis, Richard M. Durbin, Panagiotis Deloukas, Aravinda Chakravarti, Peter Donnelly +516 more

Papers

Driven by 203 papers — median percentile 46. Top paper: “A global reference for human genetic variation”.

A global reference for human genetic variation

Nature(2015)10.1038/nature15393

Top 1%

10.6DataRank

Top 1%20166 citations

Gonçalo R. Abecasis, Richard M. Durbin, Panagiotis Deloukas, Aravinda Chakravarti, Peter Donnelly +516 more

The genome of a songbird

Nature(2010)10.1038/nature08819

N/A

10.5DataRank · unranked

836 citations

David F. Clayton, Hans Ellegren, Arthur P. Arnold, LaDeana W. Hillier, Axel Künstner +77 more

The Modern-Era Retrospective Analysis for Research and Applications, Version 2 (MERRA-2)

Journal of Climate(2017)10.1175/jcli-d-16-0758.1

Top 2%

9.1DataRank

Top 2%9410 citations

Will McCarty, Max J. Suárez, Ricardo Todling, Andrea Molod, Lawrence Takacs +36 more

Trans-ethnic and Ancestry-Specific Blood-Cell Genetics in 746,667 Individuals from 5 Global Populations

Cell(2020)10.1016/j.cell.2020.06.045

N/A

8.3DataRank · unranked

739 citations

Laura M. Raffield, Abdou Mousas, Saori Sakaue, Jennifer E. Huffman, Arden Moscati +95 more

Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel

Nature Communications(2014)10.1038/ncomms4934

Top 2%

8.3DataRank

Top 2%460 citations

Jonathan Marchini, Peter Donnelly, Gerton Lunter, Jonathan L. Marchini, Simon Myers +364 more

Genome-wide association analysis of 19,629 individuals identifies variants influencing regional brain volumes and refines their genetic co-architecture with cognitive and mental health traits

Nature Genetics(2019)10.1038/s41588-019-0516-6

N/A

6.3DataRank · unranked

309 citations

Tianyou Luo, Tengfei Li, Yun Li, Jingwen Zhang, Yue Shan +6 more

Structural insights into the interaction and activation of histone deacetylase 3 by nuclear receptor corepressors

Proceedings of the National Academy of Sciences(2005)10.1073/pnas.0500299102

N/A

4.4DataRank · unranked

95 citations

James D. Love, Yun Li, Mitchell A. Lazar, David Neuhaus, John W. R. Schwabe +1 more

Deep coverage whole genome sequences and plasma lipoprotein(a) in individuals of European and African ancestries

Nature Communications(2018)10.1038/s41467-018-04668-w

N/A

3.7DataRank · unranked

109 citations

Sanni Ruotsalainen, Robert E. Handsaker, Maris Alver, Jonathan M. Bloom, Timothy Poterba +442 more

Common variants contribute to intrinsic human brain functional networks

Nature Genetics(2022)10.1038/s41588-022-01039-6

N/A

2.5DataRank · unranked

158 citations

Tengfei Li, Stephen M. Smith, Di Xiong, Xifeng Wang, Yue Yang +15 more

Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project

Molecular Cell(2023)10.1016/j.molcel.2023.06.018

N/A

1.7DataRank · unranked

97 citations

Frank Alber, Sarah Aufmkolk, Brian J. Beliveau, Benoit G. Bruneau, Andrew S. Belmont +30 more

High-throughput PRIME-editing screens identify functional DNA variants in the human genome

Molecular Cell(2023)10.1016/j.molcel.2023.11.021

N/A

1.7DataRank · unranked

67 citations

Han Yang, Jovia L. Nierenberg, Yifan Sun, Jiawen Chen, Cooper Beaman +7 more

Improving polygenic risk prediction in admixed populations by explicitly modeling ancestral-differential effects via GAUDI

Nature Communications(2024)10.1038/s41467-024-45135-z

N/A

1.4DataRank · unranked

56 citations

Bryce Rowland, Jiawen Chen, Anna V. Mikhaylova, Christy L. Avery, Ulrike Peters +13 more

Deciphering the impact of genomic variation on function

Nature(2024)10.1038/s41586-024-07510-0

N/A

1.1DataRank · unranked

89 citations

Jesse M. Engreitz, Heather A. Lawson, Harinder Singh, Lea M. Starita, Gary C. Hon +95 more

Discovery and fine-mapping of height loci via high-density imputation of GWASs in individuals of African ancestry

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.02.011

N/A

1.1DataRank · unranked

34 citations

Anne E. Justice, Kristin L. Young, Eirini Marouli, Xinruo Zhang, Rebecca S. Fine +220 more

Epigenome-wide association study of diet quality in the Women’s Health Initiative and TwinsUK cohort

International Journal of Epidemiology(2020)10.1093/ije/dyaa215

Top 20%

0.998DataRank

Top 20%29 citations

Eric A. Whitsel, Ricardo Costeira, Olatz M. Masachs, Caroline I. Le Roy, Jordana T. Bell +15 more

The Polygenic and Monogenic Basis of Blood Traits and Diseases

Cell(2020)10.1016/j.cell.2020.08.008

N/A

0.988DataRank · unranked

722 citations

Erik L. Bao, Parsa Akbari, Caleb A. Lareau, Abdou Mousas, Tao Jiang +95 more

Canonical correlation analysis for multi-omics: Application to cross-cohort analysis

PLoS Genetics(2023)10.1371/journal.pgen.1010517

N/A

0.970DataRank · unranked

40 citations

François Aguet, Kristin G. Ardlie, Jiawen Chen, Elaine Cornell, Dan Cruz +22 more

Genetic Modifiers of Cystic Fibrosis Lung Disease Severity: Whole-Genome Analysis of 7,840 Patients

American Journal of Respiratory and Critical Care Medicine(2023)10.1164/rccm.202209-1653oc

N/A

0.930DataRank · unranked

38 citations

Paul J. Gallins, Rhonda G. Pace, Hong Dang, Melis A. Aksit, Elizabeth Blue +25 more

The PRIMED Consortium: Reducing disparities in polygenic risk assessment

The American Journal of Human Genetics(2024)10.1016/j.ajhg.2024.10.010

N/A

0.893DataRank · unranked

37 citations

Matthew P. Conomos, Sarah C. Nelson, Sally N. Adebamowo, Ananyo Choudhury, David V. Conti +90 more

Common genetic variation influencing human white matter microstructure

Science(2021)10.1126/science.abf3736

N/A

0.825DataRank · unranked

244 citations

Tengfei Li, Yue Yang, Xifeng Wang, Tianyou Luo, Yue Shan +10 more

GWAS of 19,629 individuals identifies novel genetic variants for regional brain volumes and refines their genetic co-architecture with cognitive and mental health traits

bioRxiv (Cold Spring Harbor Laboratory)10.1101/586339

N/A

0.777DataRank · unranked

14 citations

Tianyou Luo, Tengfei Li, Yun Li, Jingwen Zhang, Yue Shan +6 more

Cell-type-specific 3D epigenomes in the developing human cortex

Nature(2020)10.1038/s41586-020-2825-4

N/A

0.768DataRank · unranked

166 citations

Mark-Phillip Pebworth, Xiaoyu Yang, Armen Abnousi, Changxu Fan, Jia Wen +18 more

Whole genome sequence analysis of platelet traits in the NHLBI Trans-Omics for Precision Medicine (TOPMed) initiative

Human Molecular Genetics(2021)10.1093/hmg/ddab252

Top 28%

0.724DataRank

Top 28%20 citations

Yao Hu, Quan Sun, Deepti Jain, Jai Broome, Ming‐Huei Chen +62 more

Leveraging base-pair mammalian constraint to understand genetic variation and human disease

Science(2023)10.1126/science.abn2937

N/A

0.721DataRank · unranked

121 citations

Jennifer R. S. Meadows, Steven Gazal, BaDoi N. Phan, Xue Li, Diane P. Genereux +70 more

Common genetic risk variants identified in the SPARK cohort support DDHD2 as a candidate risk gene for autism

Translational Psychiatry(2020)10.1038/s41398-020-00953-9

N/A

0.706DataRank · unranked

110 citations

Dan Liang, Huaigu Sun, Nil Aygün, Jessica C. McAfee, Jessica E. Davis +8 more

TOP-LD: A tool to explore linkage disequilibrium with TOPMed whole-genome sequence data

The American Journal of Human Genetics(2022)10.1016/j.ajhg.2022.04.006

N/A

0.701DataRank · unranked

106 citations

Jonathan D. Rosen, Quan Sun, Jiawen Chen, Marsha M. Wheeler, Ying Zhou +20 more

Methylome-Wide Association Study of Central Adiposity Implicates Genes Involved in Immune and Endocrine Systems

Epigenomics(2020)10.2217/epi-2019-0276

Top 29%

0.694DataRank

Top 29%16 citations

Geetha Chittoor, Rahul Gondalia, Phillip E. Melton, Elise Lim, Megan L. Grove +23 more

SnapHiC: a computational pipeline to identify chromatin loops from single-cell Hi-C data

Nature Methods(2021)10.1038/s41592-021-01231-2

N/A

0.688DataRank · unranked

97 citations

Armen Abnousi, Yanxiao Zhang, Guoqiang Li, Lindsay Lee, Ziyin Chen +9 more

Mosaic chromosomal alterations in blood across ancestries using whole-genome sequencing

Nature Genetics(2023)10.1038/s41588-023-01553-1

N/A

0.681DataRank · unranked

31 citations

Ying Zhou, Adrienne M. Stilp, Jason Bacon, Justin Wong, Zuhal Özcan +46 more

Transcriptome-wide association analysis of brain structures yields insights into pleiotropy with complex neuropsychiatric traits

Nature Communications(2021)10.1038/s41467-021-23130-y

N/A

0.680DataRank · unranked

92 citations

Yue Shan, Yue Yang, Zhaolong Yu, Tengfei Li, Xifeng Wang +7 more

Increased burden of ultra-rare structural variants localizing to boundaries of topologically associated domains in schizophrenia

Nature Communications(2020)10.1038/s41467-020-15707-w

N/A

0.678DataRank · unranked

91 citations

Ruth Huh, Nikolay Oskolkov, Jia Wen, Sergiu Netotea, Paola Giusti‐Rodríguez +15 more

A comprehensive comparison on cell-type composition inference for spatial transcriptomics data

Briefings in Bioinformatics(2022)10.1093/bib/bbac245

N/A

0.650DataRank · unranked

75 citations

Weifang Liu, Tianyou Luo, Zhentao Yu, Min-Zhi Jiang, Jia Wen +6 more

Eye-brain connections revealed by multimodal retinal and brain imaging genetics

Nature Communications(2024)10.1038/s41467-024-50309-w

N/A

0.646DataRank · unranked

73 citations

Yujue Li, Zirui Fan, Zhenyi Wu, Juan Shu, Xiaochen Yang +13 more

Expression quantitative trait methylation analysis elucidates gene regulatory effects of DNA methylation: the Framingham Heart Study

Scientific Reports(2023)10.1038/s41598-023-39936-3

Top 31%

0.641DataRank

Top 31%32 citations

Helena Bui, Roby Joehanes, Jiantao Ma, Chunyu Liu, Tianxiao Huan +31 more

Analyses of biomarker traits in diverse UK biobank participants identify associations missed by European-centric analysis strategies

Journal of Human Genetics(2021)10.1038/s10038-021-00968-0

N/A

0.604DataRank · unranked

55 citations

Misa Graff, Bryce Rowland, Jia Wen, Le Huang, Tyne W. Miller‐Fleming +14 more

Blood DNA methylation sites predict death risk in a longitudinal study of 12, 300 individuals

Aging(2020)10.18632/aging.103408

N/A

0.574DataRank · unranked

45 citations

Riccardo E. Marioni, Cavin Ward‐Caviness, Rahul Gondalia, Weihua Guan, Brian Chen +44 more

Univariate Gaussian Model for Multimodal Inseparable Problems

Lecture Notes in Computer Science(2017)10.1007/978-3-319-63309-1_54

N/A

0.564DataRank · unranked

7 citations

Yangmin Li, Bingxiao Ding, Yun Li, Geng Zhang

3D Epigenomic Characterization Reveals Insights Into Gene Regulation and Lineage Specification During Corticogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.24.963652

N/A

0.530DataRank · unranked

7 citations

Mark-Phillip Pebworth, Xiaoyu Yang, Armen Abnousi, Changxu Fan, Jia Wen +17 more

From GWAS variant to function: A study of ∼148,000 variants for blood cell traits

Human Genetics and Genomics Advances(2021)10.1016/j.xhgg.2021.100063

N/A

0.523DataRank · unranked

15 citations

Cheynna Crowley, Le Huang, Jia Wen, Jiawen Chen, Erik L. Bao +7 more

Ancestry-specific associations identified in genome-wide combined-phenotype study of red blood cell traits emphasize benefits of diversity in genomics

BMC Genomics(2020)10.1186/s12864-020-6626-9

N/A

0.515DataRank · unranked

30 citations

Antoine Baldassari, Stephanie A. Bien, Laura M. Raffield, Heather M. Highland, Colleen M. Sitlani +16 more

Parallel characterization of cis-regulatory elements for multiple genes using CRISPRpath

Science Advances(2021)10.1126/sciadv.abi4360

N/A

0.510DataRank · unranked

29 citations

Mengchi Wang, Bingkun Li, Kirsty Jamieson, Lina Zheng, Ian Jones +16 more

Whole genome sequence analyses of eGFR in 23,732 people representing multiple ancestries in the NHLBI trans-omics for precision medicine (TOPMed) consortium

EBioMedicine(2021)10.1016/j.ebiom.2020.103157

N/A

0.505DataRank · unranked

28 citations

Kelsey Grinde, Jennifer A. Brody, Charles E. Breeze, Laura M. Raffield, Josyf C. Mychaleckyj +68 more

Whole-genome sequencing in diverse subjects identifies genetic correlates of leukocyte traits: The NHLBI TOPMed program

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.08.007

N/A

0.494DataRank · unranked

26 citations

Caitlin McHugh, Linda M. Polfus, Laura M. Raffield, Meher Preethi Boorgula, Thomas W. Blackwell +88 more

Leukocyte Traits and Exposure to Ambient Particulate Matter Air Pollution in the Women’s Health Initiative and Atherosclerosis Risk in Communities Study

Environmental Health Perspectives(2020)10.1289/ehp5360

N/A

0.489DataRank · unranked

25 citations

Katelyn M. Holliday, Antoine Baldassari, Anne E. Justice, James D. Stewart, Duanping Liao +18 more

Multi-ethnic genome-wide association analyses of white blood cell and platelet traits in the Population Architecture using Genomics and Epidemiology (PAGE) study

BMC Genomics(2021)10.1186/s12864-021-07745-5

N/A

0.477DataRank · unranked

23 citations

Stephanie A. Bien, Katherine K. Nishimura, Jeffrey Haessler, Chani J. Hodonsky, Antoine Baldassari +29 more

Adiponectin GWAS loci harboring extensive allelic heterogeneity exhibit distinct molecular consequences

PLoS Genetics(2020)10.1371/journal.pgen.1009019

N/A

0.470DataRank · unranked

22 citations

Apoorva K. Iyengar, Swarooparani Vadlamudi, Chelsea K. Raulerson, Anne Jackson, Sarah M. Brotman +20 more

Gaseous air pollutants and DNA methylation in a methylome-wide association study of an ethnically and environmentally diverse population of U.S. adults

Environmental Research(2022)10.1016/j.envres.2022.113360

N/A

0.457DataRank · unranked

20 citations

Rahul Gondalia, Antoine Baldassari, Anne E. Justice, James D. Stewart, Duanping Liao +26 more

Genome-wide study investigating effector genes and polygenic prediction for kidney function in persons with ancestry from Africa and the Americas

Cell Genomics(2023)10.1016/j.xgen.2023.100468

N/A

0.457DataRank · unranked

20 citations

Amy R. Bentley, Charles E. Breeze, François Aguet, Xiaoguang Xu, Girish N. Nadkarni +69 more

Host Genetic Risk Factors for Chlamydia trachomatis-Related Infertility in Women

The Journal of Infectious Diseases(2021)10.1093/infdis/jiab149

N/A

0.457DataRank · unranked

20 citations

Wujuan Zhong, Catherine M. O’Connell, Yutong Liu, Catherine L. Haggerty, William M. Geisler +10 more

Whole genome sequencing identifies structural variants contributing to hematologic traits in the NHLBI TOPMed program

Nature Communications(2022)10.1038/s41467-022-35354-7

N/A

0.442DataRank · unranked

18 citations

Adrienne M. Stilp, Shuquan Rao, Bjarni V. Halldórsson, Doruk Beyter, Jia Wen +54 more

Transcriptome-wide association study in UK Biobank Europeans identifies associations with blood cell traits

Human Molecular Genetics(2022)10.1093/hmg/ddac011

N/A

0.442DataRank · unranked

18 citations

Sanan Venkatesh, Manuel Tardáguila, Jia Wen, Jonathan D. Rosen, Amanda L. Tapia +13 more

Differences in the Circulating Proteome in Individuals with versus without Sickle Cell Trait

Clinical Journal of the American Society of Nephrology(2023)10.2215/cjn.0000000000000257

N/A

0.434DataRank · unranked

17 citations

Nora Franceschini, Aditya Surapaneni, Melanie E. Garrett, Usman A. Tahir, Li Hsu +17 more

Opportunities and challenges of local ancestry in genetic association analyses

The American Journal of Human Genetics(2025)10.1016/j.ajhg.2025.03.004

N/A

0.425DataRank · unranked

16 citations

Andrea R.V.R. Horimoto, Brian Chen, Frank Ockerman, Karen L. Mohlke, Elizabeth Blue +3 more

Admix-kit: an integrated toolkit and pipeline for genetic analyses of admixed populations

Bioinformatics(2024)10.1093/bioinformatics/btae148

N/A

0.425DataRank · unranked

16 citations

Stephanie M. Gogarten, Joohyun Kim, Xing Hua, Julie‐Alexia Dias, Quan Sun +89 more

Soluble Urokinase Plasminogen Activator Receptor: Genetic Variation and Cardiovascular Disease Risk in Black Adults

Circulation Genomic and Precision Medicine(2021)10.1161/circgen.121.003421

N/A

0.416DataRank · unranked

15 citations

Laura M. Raffield, Anne H. Moxley, Tyne W. Miller‐Fleming, Paul L. Auer, Franceschini, Nora +12 more

Understanding Regulatory Mechanisms of Brain Function and Disease through 3D Genome Organization

Genes(2022)10.3390/genes13040586

N/A

0.406DataRank · unranked

14 citations

Wujuan Zhong, Jiawen Chen, Bo Huang, Ming Hu, Yun Li +1 more

Whole genome sequencing association analysis of quantitative red blood cell phenotypes: the NHLBI TOPMed program

medRxiv(2020)10.1101/2020.12.09.20246736

N/A

0.360DataRank · unranked

10 citations

Adrienne M. Stilp, Caitlin McHugh, Shuquan Rao, Deepti Jain, Xiuwen Zheng +74 more

Improving polygenic risk prediction in admixed populations by explicitly modeling ancestral-specific effects via GAUDI

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.06.511219

N/A

0.345DataRank · unranked

9 citations

Bryce Rowland, Jiawen Chen, Anna V. Mikhaylova, Christy L. Avery, Ulrike Peters +13 more

Generalized multi‐SNP mediation intersection–union test

Biometrics(2020)10.1111/biom.13418

N/A

0.345DataRank · unranked

9 citations

Toni Darville, Xiaojing Zheng, Jason P. Fine, Yun Li, Wujuan Zhong

The pivotal role of the X-chromosome in the genetic architecture of the human brain

medRxiv(2023)10.1101/2023.08.30.23294848

Top 51%

0.340DataRank

Top 51%4 citations

Patrick F. Sullivan, Tengfei Li, Bingxin Zhao, Xifeng Wang, Tianyou Luo +10 more

Genomic loci and molecular genetic mechanisms for hidradenitis suppurativa

British Journal of Dermatology(2025)10.1093/bjd/ljaf277

N/A

0.330DataRank · unranked

8 citations

Quan Sun, Sharon N. Edmiston, Kevin W. Currin, Swarooparani Vadlamudi, Tyne W. Miller‐Fleming +23 more

eSCAN: scan regulatory regions for aggregate association testing using whole-genome sequencing data

Briefings in Bioinformatics(2021)10.1093/bib/bbab497

N/A

0.312DataRank · unranked

7 citations

Quan Sun, Le Huang, Jai Broome, Adolfo Correa, Alex P. Reiner +4 more

Epigenetically mediated electrocardiographic manifestations of sub-chronic exposures to ambient particulate matter air pollution in the Women's Health Initiative and Atherosclerosis Risk in Communities Study

Environmental Research(2021)10.1016/j.envres.2021.111211

N/A

0.312DataRank · unranked

7 citations

Antoine Baldassari, Katelyn M. Holliday, Anne E. Justice, James D. Stewart, Duanping Liao +18 more

SMART-Q: An Integrative Pipeline Quantifying Cell Type-Specific RNA Transcription

PLoS ONE(2020)10.1371/journal.pone.0228760

N/A

0.292DataRank · unranked

6 citations

Seth Bergenholtz, Lenka Maliskova, Mark-Phillip Pebworth, Arnold R. Kriegstein, Yun Li +2 more

Whole genome sequencing identifies common and rare structural variants contributing to hematologic traits in the NHLBI TOPMed program

medRxiv(2021)10.1101/2021.12.16.21267871

N/A

0.292DataRank · unranked

6 citations

Adrienne M. Stilp, Shuquan Rao, Bjarni V. Halldórsson, Doruk Beyter, Jia Wen +54 more

A large‐scale transcriptome‐wide association study (TWAS) of 10 blood cell phenotypes reveals complexities of TWAS fine‐mapping

Genetic Epidemiology(2021)10.1002/gepi.22436

N/A

0.292DataRank · unranked

6 citations

Bryce Rowland, Jonathan D. Rosen, Michael Preuß, Kris Young, Misa Graff +14 more

Do adverse childhood experiences and genetic obesity risk interact in relation to body mass index in young adulthood? Findings from the National Longitudinal Study of Adolescent to Adult Health

Pediatric Obesity(2022)10.1111/ijpo.12885

N/A

0.292DataRank · unranked

6 citations

Mariaelisa Graff, Annie Green Howard, Heather M. Highland, Kristin L. Young, Kathleen Mullan Harris +5 more

Publisher Correction: Deep coverage whole genome sequences and plasma lipoprotein(a) in individuals of European and African ancestries

Nature Communications(2020)10.1038/s41467-020-15236-6

Top 57%

0.275DataRank

Top 57%2 citations

Sanni Ruotsalainen, Robert E. Handsaker, Maris Alver, Jonathan M. Bloom, Timothy Poterba +442 more

From GWAS Variant to Function: a Study of ~148,000 Variants for Blood Cell Traits

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.16.431409

N/A

0.274DataRank · unranked

4 citations

Cheynna Crowley, Le Huang, Jia Wen, Jiawen Chen, Erik L. Bao +7 more

A systematic evaluation of Hi-C data enhancement methods for enhancing PLAC-seq and HiChIP data

Briefings in Bioinformatics(2022)10.1093/bib/bbac145

N/A

0.269DataRank · unranked

5 citations

Yuchen Yang, Gang Li, Min-Zhi Jiang, Jia Wen, Armen Abnousi +4 more

A multi-ancestry genome-wide study incorporating gene-smoking interactions identifies multiple new loci for pulse pressure and mean arterial pressure

UNC Libraries(2024)10.17615/rmgv-6646

N/A

0.269DataRank · unranked

5 citations

H.J. De Silva, Annette Peters, Matthew Brown, J.D. Faul, Thomas W. Winkler +95 more

Expression quantitative trait methylation analysis elucidates gene regulatory effects of DNA methylation: The Framingham Heart Study

medRxiv(2022)10.1101/2022.04.13.22273839

Top 60%

0.253DataRank

Top 60%4 citations

Helena Bui, Roby Joehanes, Jiantao Ma, Chunyu Liu, Tianxiao Huan +32 more

Genomic and phenotypic correlates of mosaic loss of chromosome Y in blood

medRxiv(2024)10.1101/2024.04.16.24305851

N/A

0.241DataRank · unranked

4 citations

Xiaolong Ma, Adrienne M. Stilp, Fulong Yu, Jason Bacon, Justin Wong +61 more

MagicalRsq-X: A cross-cohort transferable genotype imputation quality metric

The American Journal of Human Genetics(2024)10.1016/j.ajhg.2024.04.001

N/A

0.241DataRank · unranked

4 citations

Yingxi Yang, Jonathan D. Rosen, Jiawen Chen, Xihao Li, Wyliena Guan +22 more

Super interactive promoters provide insight into cell type-specific regulatory networks in blood lineage cell types

PLoS Genetics(2022)10.1371/journal.pgen.1009984

N/A

0.241DataRank · unranked

4 citations

Taylor M. Lagler, Quan Sun, Yuchen Yang, Jiawen Chen, Yuriko Harigaya +6 more

Genetic Examination of Hematological Parameters in SARS-CoV-2 Infection and COVID-19

medRxiv(2022)10.1101/2022.02.28.22271562

N/A

0.208DataRank · unranked

3 citations

Quan Sun, Wanjiang Wang, Tyne W. Miller‐Fleming, Nancy J. Cox, Misa Graff +9 more

Mosaic chromosomal alterations in blood across ancestries via whole-genome sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.07.515222

N/A

0.208DataRank · unranked

3 citations

Ying Zhou, Adrienne M. Stilp, Jason Bacon, Justin Wong, Zuhal Özcan +41 more

DeepGWAS: Enhance GWAS Signals for Neuropsychiatric Disorders via Deep Neural Network

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.20.521277

N/A

0.165DataRank · unranked

2 citations

Gang Li, Jiawen Chen, Quan Sun, Weifang Liu, Wyliena Guan +7 more

SnapFISH-IMPUTE: an imputation method for multiplexed DNA FISH data

Communications Biology(2024)10.1038/s42003-024-06428-7

N/A

0.165DataRank · unranked

2 citations

Daiqing Wu, Shreya Mishra, Guning Shen, Huaigu Sun, Ming Hu +2 more

HPTAD: A computational method to identify topologically associating domains from HiChIP and PLAC-seq datasets

Computational and Structural Biotechnology Journal(2023)10.1016/j.csbj.2023.01.003

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0.165DataRank · unranked

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bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.03.453690

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0.165DataRank · unranked

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Scientific Reports(2022)10.1038/s41598-022-12866-2

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0.165DataRank · unranked

2 citations

Shelley A. Cole, Karin Haack, Phillip E. Melton, Lyle G. Best, Chris Bizon +8 more

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The American Journal of Human Genetics(2025)10.1016/j.ajhg.2025.03.008

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0.165DataRank · unranked

2 citations

Quan Sun, Franklin P Ockerman, Brian Chen, Laura Y. Zhou, Micah R. Hysong +12 more

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Journal of Translational Internal Medicine(2025)10.1515/jtim-2025-0047

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0.165DataRank · unranked

2 citations

Yue He, Xiaoqiu Yuan, Lin Weng, Jing Bai, Xu Liu +19 more

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bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.05.502991

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0.165DataRank · unranked

2 citations

Miao Yu, Xiaoqi Li, Chenxu Zhu, Yanxiao Zhang, Hongyu Yu +4 more

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Nature Communications(2025)10.1038/s41467-025-64336-8

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0.165DataRank

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bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.15.435494

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0.165DataRank · unranked

2 citations

Yuchen Yang, Yuriko Harigaya, Vijay G. Sankaran, Ming Hu, Alexander P. Reiner +4 more

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Genetic Epidemiology(2024)10.1002/gepi.22578

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0.141DataRank · unranked

1 citations

Chanhwa Lee, Amanda L. Tapia, Alex P. Reiner, Hua Tang, Charles Kooperberg +4 more

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medRxiv(2025)10.1101/2025.06.18.25329573

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0.123DataRank · unranked

1 citations

Mariah Meyer, Iain R. Konigsberg, Aastha Kakar, Patrick M. Carry, Yun Li +14 more

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UNC Libraries(2020)10.17615/nngh-g785

Top 78%

0.104DataRank

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D. Y. Lin, Yun Li, Paul L. Auer, Yi‐Juan Hu

Parallel Characterization of cis -Regulatory Elements for Multiple Genes Using CRISPRpath

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.19.431931

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0.104DataRank · unranked

1 citations

Mengchi Wang, Bingkun Li, Kirsty Jamieson, Lina Zheng, Ian Jones +16 more

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medRxiv(2021)10.1101/2021.04.12.21255170

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0.104DataRank · unranked

1 citations

Anastasia N. Freedman, Vennela Avula, Rebeca Harris, Weifang Liu, Calvin Pan +11 more

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Human Genetics and Genomics Advances(2021)10.1016/j.xhgg.2021.100036

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2 citations

Yuchen Yang, Armen Abnousi, Qian Zhang, Naoki Kubo, Joshua S. Martin Beem +3 more

Placental genomics mediates genetic associations with complex health traits and disease

Nature Communications(2022)10.1038/s41467-022-28365-x

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Anastasia N. Freedman, Vennela Avula, Rebeca Harris, Weifang Liu, Calvin Pan +11 more

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Frontiers in Cell and Developmental Biology(2022)10.3389/fcell.2022.957292

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23 citations

Weifang Liu, Jiawen Chen, Quan Sun, Ming Hu, Yun Li +1 more

SnapHiC2: A computationally efficient loop caller for single cell Hi-C data

Computational and Structural Biotechnology Journal(2022)10.1016/j.csbj.2022.05.046

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22 citations

Lindsay Lee, Armen Abnousi, Miao Yu, Weifang Liu, Le Huang +3 more

HPRep: Quantifying Reproducibility in HiChIP and PLAC-Seq Datasets

Current Issues in Molecular Biology(2021)10.3390/cimb43020082

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9 citations

Yuchen Yang, Armen Abnousi, Jiawen Chen, Michael Song, Ian Jones +4 more

The Association of Epigenetic Age Acceleration and Multimorbidity at Age 90 in the Women’s Health Initiative

The Journals of Gerontology Series A(2022)10.1093/gerona/glac190

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0DataRank · unranked

20 citations

Alexandra M. Binder, Brian Chen, Humberto Parada, Linda C. Gallo, John E. Alcaraz +12 more

MagicalRsq: Machine-learning-based genotype imputation quality calibration

The American Journal of Human Genetics(2022)10.1016/j.ajhg.2022.09.009

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19 citations

Yingxi Yang, Jonathan D. Rosen, Min-Zhi Jiang, Jiawen Chen, Weifang Liu +14 more

iSMNN: batch effect correction for single-cell RNA-seq data via iterative supervised mutual nearest neighbor refinement

Briefings in Bioinformatics(2021)10.1093/bib/bbab122

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0DataRank · unranked

19 citations

Gang Li, Yifang Xie, Li Wang, Taylor M. Lagler, Yingxi Yang +4 more

HiC-ACT: improved detection of chromatin interactions from Hi-C data via aggregated Cauchy test

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.01.009

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0DataRank · unranked

26 citations

Armen Abnousi, Ming Hu, Yuchen Yang, Yun Li, Taylor M. Lagler

THUNDER: A reference-free deconvolution method to infer cell type proportions from bulk Hi-C data

PLoS Genetics(2022)10.1371/journal.pgen.1010102

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0DataRank · unranked

14 citations

Ruth Huh, Zoey Hou, Cheynna Crowley, Jia Wen, Yin Shen +5 more

Functional coordination of non-myocytes plays a key role in adult zebrafish heart regeneration

EMBO Reports(2021)10.15252/embr.202152901

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0DataRank · unranked

43 citations

Ziqing Liu, Yuchen Yang, Dong Feng, Yanhan Dong, Tiffany A. Garbutt +9 more

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Trends in Genetics(2022)10.1016/j.tig.2022.03.007

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0DataRank · unranked

13 citations

Yun Li, Ming Hu, Miao Yu

MRLocus: Identifying causal genes mediating a trait through Bayesian estimation of allelic heterogeneity

PLoS Genetics(2021)10.1371/journal.pgen.1009455

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0DataRank · unranked

47 citations

Nana Matoba, Emmaleigh Wilson, Amanda L. Tapia, Yun Li, Joseph G. Ibrahim +3 more

Single-cell dual-omics reveals the transcriptomic and epigenomic diversity of cardiac non-myocytes

Cardiovascular Research(2021)10.1093/cvr/cvab134

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0DataRank · unranked

71 citations

Yuchen Yang, Hong Ma, Yifang Xie, Jun Xu, David Near +6 more

MOSTWAS: Multi-Omic Strategies for Transcriptome-Wide Association Studies

PLoS Genetics(2021)10.1371/journal.pgen.1009398

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0DataRank · unranked

82 citations

Yun Li, Michael I. Love, Arjun Bhattacharya

Accurate Inference of Local Phased Ancestry of Modern Admixed Populations

UNC Libraries(2020)10.17615/pxg8-b160

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0 citations

Wenzhi Li, Wei Xu, Yamin Ma, Qing Song, J. A. Wong +6 more

Genome-wide association study of homocysteine levels in Filipinos provides evidence for CPS1 in women and a stronger MTHFR effect in young adults

UNC Libraries(2020)10.17615/73za-5242

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0 citations

Amanda F. Marvelle, Thomas W. McDade, Yunfei Wang, Damien C. Croteau‐Chonka, Judith B. Borja +9 more

5α-ReductaseType 3 Enzyme in Benign and Malignant Prostate

UNC Libraries(2020)10.17615/n4gq-3397

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0 citations

Mark Titus, Alejandro Godoy, Varun Maher, Olga G. Kozyreva, Yun Li +2 more

Genome-Wide Association Scan for Variants Associated with Early-Onset Prostate Cancer

UNC Libraries(2020)10.17615/84ka-ac36

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0 citations

Jessica V. Ribado, Jin Li, Qing Duan, Anna Marie Johnson, William B. Isaacs +11 more

Imputation of coding variants in African Americans: better performance using data from the exome sequencing project

UNC Libraries(2020)10.17615/8p33-rs54

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0 citations

Alex P. Reiner, Lisa Warsinger Martin, Loı̈c Le Marchand, Steven Buyske, Gonçalo R. Abecasis +30 more

Genotype Imputation of MetabochipSNPs Using a Study-Specific Reference Panel of ∼4,000 Haplotypes in African Americans From the Women's Health Initiative: Imputation of Metabochip SNPs in African Americans

UNC Libraries(2020)10.17615/mwr6-2b07

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0DataRank · unranked

0 citations

Charles Kooperberg, K.E. North, Yun Li, Steven Buyske, Teri A. Manolio +12 more

Genetic architecture of lipid traits in the Hispanic community health study/study of Latinos

UNC Libraries(2020)10.17615/27xb-g366

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0DataRank · unranked

0 citations

Jill M. Norris, Yun Li, Cathy C. Laurie, Rodriguez, Carlos Jose, Emery, Leslie S. +24 more

Weak Signal Inclusion Under Dependence and Applications in Genome-wide Association Study

arXiv (Cornell University)(2022)10.48550/arxiv.2212.13574

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0DataRank · unranked

1 citations

Yifei Hu, Quan Sun, Yun Li, X. Jessie Jeng

SnapFISH: a computational pipeline to identify chromatin loops from multiplexed DNA FISH data

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.16.520793

N/A

0DataRank · unranked

0 citations

Hongyu Yu, Bojing Blair Jia, Adam Jussila, Chenxu Zhu, Jiawen Chen +8 more

Heart-brain connections: Phenotypic and genetic insights from magnetic resonance images

Science(2023)10.1126/science.abn6598

N/A

0DataRank · unranked

230 citations

Tengfei Li, Zirui Fan, Yue Yang, Juan Shu, Xiaochen Yang +14 more

Likelihood-based complex trait association testing for arbitrary depth sequencing data

UNC Libraries(2020)10.17615/qqpj-qj03

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0 citations

Song Yan, Yun Li, Zheng Xu, Andrea Byrnes, Guolian Kang +3 more

Meta-analysis of genome-wide association studies identifies eight new loci for type 2 diabetes in east Asians

UNC Libraries(2020)10.17615/47m3-y426

N/A

0DataRank · unranked

0 citations

Yi‐Cheng Chang, Xueling Sim, Ronald C W Ma, Toshimasa Yamauchi, Min Jin Go +27 more

Functional characterization of Alzheimer’s disease genetic variants in microglia

Nature Genetics(2023)10.1038/s41588-023-01506-8

N/A

0DataRank · unranked

76 citations

Jia Wen, Han Yang, Ian Rees Jones, Xiaodong Zhu, Weifang Liu +22 more

Genome-wide Association Study of Susceptibility to Particulate Matter–Associated QT Prolongation

UNC Libraries(2020)10.17615/tf1e-dg63

N/A

0DataRank · unranked

0 citations

Alex P. Reiner, James D. Stewart, Kirk C. Wilhelmsen, Lesley F. Tinker, Jeffrey Roach +12 more

Genome-wide association study of red blood cell traits in Hispanics/Latinos: The Hispanic Community Health Study/Study of Latinos

UNC Libraries(2020)10.17615/mb9w-yv90

N/A

0DataRank · unranked

0 citations

Lisa M. Brown, Brian L. Browning, Cecilia A. Laurie, Yun Li, Sharon R. Browning +22 more

AbCD: arbitrary coverage design for sequencing-based genetic studies

UNC Libraries(2020)10.17615/by87-5v10

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0 citations

Jian Kang, Kuan Chieh Huang, Yun Li, Zheng Xu, Gonçalo R. Abecasis +1 more

Imputation of Exome Sequence Variants into Population- Based Samples and Blood-Cell-Trait-Associated Loci in African Americans: NHLBI GO Exome Sequencing Project

UNC Libraries(2020)10.17615/gafw-pc57

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Santhi K. Ganesh, Ethan M. Lange, Keolu Fox, Nora Franceschini, Robert B. Wallace +17 more

Genome-wide Characterization of Shared and Distinct Genetic Components that Influence Blood Lipid Levels in Ethnically Diverse Human Populations

UNC Libraries(2020)10.17615/613z-hx36

N/A

0DataRank · unranked

0 citations

Qing Duan, Nicholas A. Johnson, Marc Coram, Lisa Warsinger Martin, Neil Risch +12 more

A Compendium of Chromatin Contact Maps Reveals Spatially Active Regions in the Human Genome

UNC Libraries(2020)10.17615/rn2d-s510

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0 citations

Bing Ren, Xu Zheng, Yun Li, Inkyung Jung, Cathy L. Barr +6 more

Prospective Associations of Coronary Heart Disease Loci in African Americans Using the MetaboChip: The PAGE Study

UNC Libraries(2020)10.17615/4xdt-j376

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0 citations

Diane M. Becker, Nobuyo Maeda, Christopher J. O’Donnell, D. Y. Lin, Alex P. Reiner +26 more

A computational method for cell type-specific expression quantitative trait loci mapping using bulk RNA-seq data

Nature Communications(2023)10.1038/s41467-023-38795-w

N/A

0DataRank · unranked

14 citations

Si Liu, Vasyl Zhabotynsky, Yun Li, D. Y. Lin, Wei Sun +1 more

SnapHiC-D: a computational pipeline to identify differential chromatin contacts from single-cell Hi-C data

Briefings in Bioinformatics(2023)10.1093/bib/bbad315

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10 citations

Miao Yu, Xiaoqi Li, Chenxu Zhu, Yanxiao Zhang, Hongyu Yu +6 more

SnapFISH: a computational pipeline to identify chromatin loops from multiplexed DNA FISH data

Nature Communications(2023)10.1038/s41467-023-40658-3

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10 citations

Hongyu Yu, Bojing Blair Jia, Adam Jussila, Chenxu Zhu, Jiawen Chen +10 more

SMART-Q: An Integrative Pipeline Quantifying Cell Type-Specific RNA Transcription

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.24.917872

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1 citations

Xiaoyu Yang, Lenka Maliskova, Yun Li, Yin Shen, Seth Bergenholtz

High throughput PRIME editing screens identify functional DNA variants in the human genome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.12.548736

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17 citations

Han Yang, Jovia L. Nierenberg, Yifan Sun, Jiawen Chen, Cooper Beaman +7 more

DeepGWAS: Enhance GWAS Signals for Neuropsychiatric Disorders via Deep Neural Network

Research Square(2023)10.21203/rs.3.rs-2399024/v1

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9 citations

Jia Wen, Gang Li, Jiawen Chen, Quan Sun, Weifang Liu +6 more

Admix-kit: An Integrated Toolkit and Pipeline for Genetic Analyses of Admixed Populations

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.30.560263

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9 citations

Stephanie M. Gogarten, Joohyun Kim, Xing Hua, Julie‐Alexia Dias, Quan Sun +10 more

eSCAN: Scan Regulatory Regions for Aggregate Association Testing using Whole Genome Sequencing Data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.30.405266

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2 citations

Yuchen Yang, Le Huang, Jai Broome, Adolfo Correa, Alex P. Reiner +3 more

SnapHiC-G: identifying long-range enhancer-promoter interactions from single-cell Hi-C data via a global background model

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.01.530686

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0 citations

Wujuan Zhong, Paola Giusti‐Rodríguez, Geoffery W. Wang, Ming Hu, Yun Li +1 more

Canonical correlation analysis for multi-omics: Application to cross-cohort analysis

UNC Libraries(2023)10.17615/hthq-e624

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0 citations

David J. Vandenberg, J. Gustav Smith, Tamar Sofer, Yongmei Liu, Peter Durda +23 more

Genetic regulators of sputum mucin concentration and their associations with COPD phenotypes

UNC Libraries(2023)10.17615/9qhm-pv73

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0 citations

Stephanie A. Christenson, Suresh Garudadri, Martijn C. Nawijn, Maarten van den Berge, Yun Li +17 more

MRLocus: identifying causal genes mediating a trait through Bayesian estimation of allelic heterogeneity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.14.250720

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0DataRank · unranked

3 citations

Nana Matoba, Emmaleigh Wilson, Amanda L. Tapia, Yun Li, Joseph G. Ibrahim +3 more

MOSTWAS: Multi-Omic Strategies for Transcriptome-Wide Association Studies

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.17.047225

N/A

0DataRank · unranked

3 citations

Yun Li, Michael I. Love, Arjun Bhattacharya

Analyses of Biomarker Traits in Diverse UK Biobank Participants Identify Associations Missed by European-centric Analysis Strategies

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.02.279844

N/A

0DataRank · unranked

5 citations

Misa Graff, Bryce Rowland, Jia Wen, Le Huang, Moa P. Lee +6 more

Genome-wide Association with C-Reactive Protein Levels in CLHNS: Evidence for the CRP and HNF1A Loci and their Interaction with Exposure to a Pathogenic Environment

UNC Libraries(2020)10.17615/2gye-7151

N/A

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2 citations

Linda S. Adair, Thomas W. McDade, Ying Wu, Yun Li, Karen L. Mohlke +3 more

Genetic modifiers of body mass index in individuals with cystic fibrosis

The American Journal of Human Genetics(2024)10.1016/j.ajhg.2024.08.004

N/A

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4 citations

Karen S. Raraigh, Elizabeth Pugh, Melis A. Aksit, Peng Zhang, Rhonda G. Pace +39 more

Performance of Genotype Imputation for Rare Variants Identified in Exons and Flanking Regions of Genes

UNC Libraries(2020)10.17615/4grc-0v75

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2 citations

Li Li, Jennifer L. Aponte, John C. Whittaker, Matthew R. Nelson, Margaret G. Ehm +7 more

CUE: CpG impUtation ensemble for DNA methylation levels across the human methylation450 (HM450) and EPIC (HM850) BeadChip platforms

Epigenetics(2020)10.1080/15592294.2020.1827716

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2 citations

Laura M. Raffield, Mark W. Logue, Mark W. Miller, Hudson P. Santos, T. Michael O’Shea +3 more

A genome‐wide association study of alloimmunization in the TOPMed OMG‐SCD cohort identifies a locus on chromosome 12

Transfusion(2024)10.1111/trf.17944

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2 citations

Matthew S. Karafin, Melanie E. Garrett, Yun Li, Allison E. Ashley‐Koch, Marilyn J. Telen +1 more

One Size Doesn't Fit All - RefEditor: Building Personalized Diploid Reference Genome to Improve Read Mapping and Genotype Calling in Next Generation Sequencing Studies

UNC Libraries(2020)10.17615/m6xz-h551

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3 citations

Yi‐Juan Hu, Shuai Yuan, Zhaohui Qin, Guosheng Zhang, Yun Li +1 more

SnapHiC-G: identifying long-range enhancer–promoter interactions from single-cell Hi-C data via a global background model

Briefings in Bioinformatics(2024)10.1093/bib/bbae426

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0DataRank · unranked

2 citations

Wujuan Zhong, Paola Giusti‐Rodríguez, Zhiyun Jiang, Geoffery W. Wang, Huaigu Sun +3 more

Slc35a1 deficiency causes thrombocytopenia due to impaired megakaryocytopoiesis and excessive platelet clearance in the liver

Haematologica(2020)10.3324/haematol.2019.225987

N/A

0DataRank · unranked

30 citations

Yun Li, Yuji Kondo, Huiping Shi, Jingjing Han, Yizhi Jiang +7 more

SMNN: batch effect correction for single-cell RNA-seq data via supervised mutual nearest neighbor detection

Briefings in Bioinformatics(2020)10.1093/bib/bbaa097

N/A

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33 citations

Gang Li, Huijun Qian, Kirk C. Wilhelmsen, Yin Shen, Yun Li +1 more

Genetic polymorphisms of Leukocyte Immunoglobulin-Like Receptor B3 ( LILRB3 ) gene in African American kidney transplant recipients are associated with post-transplant graft failure

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.21.581383

N/A

0DataRank · unranked

1 citations

Zhengzi Yi, Chengguo Wei, Wenlin Wang, Paolo Cravedi, Fasika Tedla +38 more

EndoPRS: Incorporating Endophenotype Information to Improve Polygenic Risk Scores for Clinical Endpoints

medRxiv(2024)10.1101/2024.05.23.24307839

N/A

0DataRank · unranked

1 citations

Quan Sun, Frank Ockerman, Brian Chen, Laura Y. Zhou, Hongyuan Cao +10 more

SnapFISH-IMPUTE: an imputation method for multiplexed DNA FISH data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.12.575427

N/A

0DataRank · unranked

0 citations

Daiqing Wu, Guning Shen, Ming Hu, Yun Li, Hongyu Yu

Cell-type specific inference from bulk RNA-sequencing data by integrating single cell reference profiles via EPIC-unmix

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.23.595514

N/A

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0 citations

Quan Sun, Xinyue Zeng, Xiaoyu Yang, Fei Liu, Jinying Zhao +5 more

Whole genome sequence analyses of eGFR in 23,732 people representing multiple ancestries in the NHLBI trans-omics for precision medicine (TOPMed) consortium

UNC Libraries(2024)10.17615/hd68-ze50

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B.M. Psaty, Leslie J. Baier, Robert B. Wallace, Anna Köttgen, Jiang He +69 more

Do adverse childhood experiences and genetic obesity risk interact in relation to body mass index in young adulthood? Findings from the National Longitudinal Study of Adolescent to Adult Health

UNC Libraries(2024)10.17615/nfam-9s98

N/A

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0 citations

Annie Green Howard, Penny Gordon-Larsen, K.L. Young, Qing Duan, K.M. Harris +5 more

Whole genome sequence analysis of platelet traits in the NHLBI Trans-Omics for Precision Medicine (TOPMed) initiative

UNC Libraries(2024)10.17615/8syg-6y95

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Marsha M. Wheeler, J. D. Broome, A. Manichaikul, J. Blangero, N. Heard-Costa +62 more

Whole-genome sequencing in diverse subjects identifies genetic correlates of leukocyte traits: The NHLBI TOPMed program

UNC Libraries(2024)10.17615/m04b-7b81

N/A

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0 citations

Yann Ilboudo, J.A. Brody, Jonathan D. Rosen, A.V. Smith, M. FORNAGE +89 more

Methylome-wide association study of central adiposity implicates genes involved in immune and endocrine systems

UNC Libraries(2024)10.17615/jjp3-c790

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Hou, L., Andrea Baccarelli, Yun Li, Phillip E. Melton, A.E. Justice +23 more

Hepatoviruses promote very-long-chain fatty acid and sphingolipid synthesis for viral RNA replication and quasi-enveloped virus release

UNC Libraries(2024)10.17615/0bp1-d454

N/A

0DataRank · unranked

0 citations

McKnight K.L, T Shiota, Zhongrui Li, Takayoshi Shirasaki, Sheahan T.P +10 more

Placental genomics mediates genetic associations with complex health traits and disease

UNC Libraries(2024)10.17615/0d0q-4s44

N/A

0DataRank · unranked

0 citations

Lisa Smeester, Carmen J. Marsit, Hudson P. Santos, Weifang Liu, Rebecca C. Fry +11 more

A new locus regulating MICALL2 expression was identified for association with executive inhibition in children with attention deficit hyperactivity disorder

UNC Libraries(2024)10.17615/0wm0-qb82

N/A

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0 citations

Dong Liu, Yanxiao Zhang, Baohong Xu, Qing Duan, Qian Cao +13 more

Common α-globin variants modify hematologic and other clinical phenotypes in sickle cell trait and disease

UNC Libraries(2024)10.17615/6n4z-q211

N/A

0DataRank · unranked

0 citations

Jacob C. Ulirsch, Alex P. Reiner, Gonçalo R. Abecasis, Joshua D. Smith, Ethan M. Lange +20 more

Common DNA sequence variation influences 3-dimensional conformation of the human genome

UNC Libraries(2024)10.17615/kmnm-q097

N/A

0DataRank · unranked

0 citations

Tristin Liu, Bing Ren, Joshua Chiou, Yun Li, Ming Hu +8 more

eSCAN: scan regulatory regions for aggregate association testing using whole-genome sequencing data

UNC Libraries(2024)10.17615/7ck5-fq86

N/A

0DataRank · unranked

0 citations

NHLBI Trans-Omics for Precision Medicine Consortium, Adolfo Correa, Yuchen Yang, Quan Sun, Yun Li +5 more

Cell-type specific inference from bulk RNA-sequencing data by integrating single cell reference profiles via EPIC-unmix

Research Square(2024)10.21203/rs.3.rs-4979032/v1

N/A

0DataRank · unranked

0 citations

Quan Sun, Xinyue Zeng, Gang Li, Xiaoyu Yang, Fei Liu +6 more

SnapFISH-IMPUTE: an imputation method for multiplexed DNA FISH data

UNC Libraries(2024)10.17615/78zt-nv17

N/A

0DataRank · unranked

0 citations

Hongyu Yu, Daiqing Wu, Huaigu Sun, Shreya Mishra, Guning Shen +2 more

Eye-brain connections revealed by multimodal retinal and brain imaging genetics

UNC Libraries(2024)10.17615/8n0c-rg31

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0DataRank · unranked

0 citations

Bingxuan Li, Jason L. Stein, Zirui Fan, Yujue Li, Xiaochen Yang +13 more

Weak signal inclusion under dependence and applications in genome-wide association study

UNC Libraries(2024)10.17615/0cfx-7e33

N/A

0DataRank · unranked

0 citations

Quan Sun, X. Jessie Jeng, Yun Li, Yifei Hu

The PRIMED Consortium: Reducing disparities in polygenic risk assessment

UNC Libraries(2024)10.17615/67cq-h633

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0DataRank · unranked

0 citations

John S. Witte, Iman K. Martin, Sally N. Adebamowo, Maggie C. Y. Ng, Eimear E. Kenny +22 more

LILRB3 genetic variation is associated with kidney transplant failure in African American recipients

Nature Medicine(2025)10.1038/s41591-025-03568-z

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0DataRank · unranked

8 citations

Zhengzi Yi, Chengguo Wei, Wenlin Wang, Tianyuan Ren, Paolo Cravedi +43 more

Inferring Regulatory Networks From Mixed Observational Data Using Directed Acyclic Graphs

Frontiers in Genetics(2020)10.3389/fgene.2020.00008

N/A

0DataRank · unranked

17 citations

Dong Li, Taylor B. Poston, Toni Darville, Cassandra N. Spracklen, Di Wu +5 more

The circadian clock shapes the Arabidopsis transcriptome by regulating alternative splicing and alternative polyadenylation

Journal of Biological Chemistry(2020)10.1074/jbc.ra120.013513

N/A

0DataRank · unranked

68 citations

Yun Li, Aziz Sancar, Onur Oztas, Yuchen Yang

Robust Hi-C Maps of Enhancer-Promoter Interactions Reveal the Function of Non-coding Genome in Neural Development and Diseases

Molecular Cell(2020)10.1016/j.molcel.2020.06.007

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0DataRank · unranked

193 citations

Xiaoxiao Liu, Wei‐Kai Huang, Paola Giusti‐Rodríguez, Jian Cui, Shanshan Zhang +17 more

Variational Autoencoder-based Model Improves Polygenic Prediction in Blood Cell Traits

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.13.632820

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0DataRank · unranked

2 citations

Minxing Pang, Jia Wen, Laura Y. Zhou, Laura M. Raffield, Haibo Zhou +5 more

cellSTAAR: incorporating single-cell-sequencing-based functional data to boost power in rare variant association testing of noncoding regions

Nature Methods(2025)10.1038/s41592-025-02919-5

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0DataRank · unranked

0 citations

Yi Zhang, Xihao Li, Margaret Sunitha Selvaraj, Zilin Li, Hufeng Zhou +544 more

Merging or ensembling: integrative analysis in multiple neuroimaging studies

UNC Libraries(2025)10.17615/3n93-f335

N/A

0DataRank · unranked

0 citations

Yun Li, Hongtu Zhu, Chao Huang, Yue Shan

A comprehensive comparison on clustering methods for multi-slice spatially resolved transcriptomics data analysis

Briefings in Bioinformatics(2025)10.1093/bib/bbaf471

N/A

0DataRank · unranked

0 citations

Shuai Huang, Muqing Zhou, Yiyan Zhang, Wenrong Wu, Xihao Li +4 more

Genetic examination of hematological parameters in SARS-CoV-2 infection and COVID-19

UNC Libraries(2025)10.17615/w64f-zc73

N/A

0DataRank · unranked

0 citations

Annika Faucon, Quan Sun, Misa Graff, Paul L. Auer, Nancy J. Cox +9 more

Improving polygenic risk prediction in admixed populations by explicitly modeling ancestral-differential effects via GAUDI

UNC Libraries(2025)10.17615/nrrg-ws98

N/A

0DataRank · unranked

0 citations

Laura M. Raffield, Christy L. Avery, Quan Sun, Anna V. Mikhaylova, Tara C. Matise +13 more

OR26-04 MKRN3 overexpression in the hypothalamic arcuate nucleus modulates the body temperature of adult female mice

Journal of the Endocrine Society(2025)10.1210/jendso/bvaf149.1953

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0DataRank · unranked

0 citations

Yun Li, Encarnacion Torres Jimenez, Miguel Sena Esteves, Stephanie Roberts, Rona S. Carroll +2 more

Hi-C informed kernel association test: integrating 3-dimensional genome structure into variant-set association for whole-genome sequencing data

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.28.684891

N/A

0DataRank · unranked

0 citations

Riddhik Basu, Wenbin Lu, Shannon T. Holloway, Yun Li, Jung‐Ying Tzeng +1 more

Expression quantitative trait methylation analysis elucidates gene regulatory effects of DNA methylation: the Framingham Heart Study

UNC Libraries(2025)10.17615/408w-ez13

N/A

0DataRank · unranked

0 citations

Jessica Lundin, Dawn L. DeMeo, Daniel Levy, Ramachandran S. Vasan, Shih‐Jen Hwang +31 more

HPTAD: A computational method to identify topologically associating domains from HiChIP and PLAC-seq datasets

UNC Libraries(2025)10.17615/3wf1-gk25

N/A

0DataRank · unranked

0 citations

Jia Wen, Yun Li, Armen Abnousi, Ming Hu, Jonathan D. Rosen +2 more

MagicalRsq-X: A cross-cohort transferable genotype imputation quality metric

UNC Libraries(2025)10.17615/4609-8b83

N/A

0DataRank · unranked

0 citations

Byron C. Jaeger, Michael J. Bamshad, Alex P. Reiner, Yun Li, Jerome I. Rotter +22 more

Differences in the Circulating Proteome in Individuals with versus without Sickle Cell Trait

UNC Libraries(2025)10.17615/kwhm-gq49

N/A

0DataRank · unranked

0 citations

Melanie E. Garrett, Morgan E. Grams, Bing Yu, Alex P. Reiner, Genevieve L. Wojcik +17 more

SnapHiC-D: a computational pipeline to identify differential chromatin contacts from single-cell Hi-C data

UNC Libraries(2025)10.17615/0hcp-4r09

N/A

0DataRank · unranked

0 citations

Ziyin Chen, Shreya Mishra, Hongyu Yu, Xiaoqi Li, Miao Yu +6 more

Mosaic chromosomal alterations in blood across ancestries using whole-genome sequencing

UNC Libraries(2025)10.17615/mztm-gw84

N/A

0DataRank · unranked

0 citations

Margaret F. Doyle, Jason Bacon, Xiaolong Ma, Nathan Pankratz, Ramachandran S. Vasan +46 more

High-throughput PRIME-editing screens identify functional DNA variants in the human genome

UNC Libraries(2025)10.17615/bw8x-z178

N/A

0DataRank · unranked

0 citations

Jovia L. Nierenberg, Thu Huong Pham, Vivek Narayan, Yin Shen, Han Yang +8 more

Stressful life events, social support, and epigenetic aging in the Women's Health Initiative

UNC Libraries(2025)10.17615/y2b5-r147

N/A

0DataRank · unranked

0 citations

Shelly‐Ann Love, Parveen Bhatti, Elena Salmoirago‐Blotcher, Aladdin H. Shadyab, JoAnn E. Manson +9 more

Genetic Modifiers of Cystic Fibrosis Lung Disease Severity: Whole-Genome Analysis of 7,840 Patients.

UNC Libraries(2025)10.17615/f92f-hz53

N/A

0DataRank · unranked

0 citations

Joseph M. Collaco, Kurt N. Hetrick, Elizabeth Blue, Ronald L. Gibson, William W Gordon +25 more

Genome-wide study investigating effector genes and polygenic prediction for kidney function in persons with ancestry from Africa and the Americas

UNC Libraries(2025)10.17615/yvmq-kt94

N/A

0DataRank · unranked

0 citations

Xiaoguang Xu, Jason G. Umans, Thomas Gilliland, Charles Kooperberg, Mariah Meyer +69 more

A genome‐wide association study of alloimmunization in the TOPMed OMG‐SCD cohort identifies a locus on chromosome 12

UNC Libraries(2025)10.17615/1sjh-nh73

N/A

0DataRank · unranked

0 citations

Matthew S. Karafin, Quan Sun, Allison E. Ashley‐Koch, Yun Li, Marilyn J. Telen +1 more

Heart-brain connections: Phenotypic and genetic insights from magnetic resonance images

UNC Libraries(2025)10.17615/zcmz-4010

N/A

0DataRank · unranked

0 citations

Bingxuan Li, Chal E. Tomlinson, Yue Shan, Yun Li, Ziliang Zhu +14 more

Diet Quality and Epigenetic Aging in the Women’s Health Initiative

UNC Libraries(2025)10.17615/t7m3-hq88

N/A

0DataRank · unranked

0 citations

Parveen Bhatti, James D. Stewart, Eric A. Whitsel, Anthony S. Zannas, Steve Horvath +8 more

SnapHiC-G: identifying long-range enhancer-promoter interactions from single-cell Hi-C data via a global background model.

UNC Libraries(2025)10.17615/1fmk-1f23

N/A

0DataRank · unranked

0 citations

Paola Giusti‐Rodríguez, Geoffery W. Wang, Weifang Liu, Ming Hu, Wujuan Zhong +3 more

SnapFISH: a computational pipeline to identify chromatin loops from multiplexed DNA FISH data

UNC Libraries(2025)10.17615/vmcs-0c51

N/A

0DataRank · unranked

0 citations

Caterina Strambio‐De‐Castillia, Lindsay Lee, Shreya Mishra, Bing Ren, Alistair N. Boettiger +10 more

A computational method for cell type-specific expression quantitative trait loci mapping using bulk RNA-seq data

UNC Libraries(2025)10.17615/cmdb-vj61

N/A

0DataRank · unranked

0 citations

Wei Sun, Si Liu, Paul Little, Vasyl Zhabotynsky, D. Y. Lin +1 more

Functional characterization of Alzheimer’s disease genetic variants in microglia

UNC Libraries(2025)10.17615/jm1j-1y96

N/A

0DataRank · unranked

0 citations

Yang Sun, Xiaoyu Yang, Mirunalini Ravichandran, Han Yang, Jia Wen +22 more

Association of metabolomics measurements with blood cell phenotypes

Blood Cells Molecules and Diseases(2025)10.1016/j.bcmd.2025.102966

N/A

0DataRank · unranked

0 citations

Amanda L. Tapia, Eric Boerwinkle, Clary B. Clish, Robert E. Gerszten, Misa Graff +15 more

Functional Annotation of the Major Histocompatibility Complex Locus

bioRxiv (Cold Spring Harbor Laboratory)(2026)10.64898/2026.02.01.703124

N/A

0DataRank · unranked

0 citations

Alejandro Barrera, Maria ter Weele, Siyan Liu, Euphy Wu, Shengyu Li +22 more

Stereotaxic Viral Injection and Gradient-Index Lens Implantation for Deep Brain In Vivo Calcium Imaging

Journal of Visualized Experiments(2021)10.3791/63049-v

N/A

0DataRank · unranked

0 citations

Bo Liang, Rongsong Liu, Yun Li, Rashmi Thapa

Heart-brain connections: phenotypic and genetic insights from 40,000 cardiac and brain magnetic resonance images

medRxiv(2021)10.1101/2021.11.01.21265779

N/A

0DataRank · unranked

3 citations

Tengfei Li, Zirui Fan, Yue Yang, Xifeng Wang, Tianyou Luo +11 more