🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Edoardo Pasolli

University of Naples Federico II

ORCID: 0000-0003-0799-3490
Biochemistry, Genetics and Molecular BiologyAgricultural and Biological SciencesEnvironmental ScienceEngineering

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
14.7Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Accessible, curated metagenomic data through ExperimentHub

Nature Methods(2017)10.1038/nmeth.4468
Top 2%
7.1DataRank
Top 2%570 citations

Lucas Schiffer, Paolo Manghi, Audrey Renson, Valerie Obenchain, Duy Tin Truong +9 more

Papers

Driven by 16 papers — median percentile 93. Top paper: “Accessible, curated metagenomic data through ExperimentHub”.

Accessible, curated metagenomic data through ExperimentHub

Nature Methods(2017)10.1038/nmeth.4468
Top 2%
7.1DataRank
Top 2%570 citations

Lucas Schiffer, Paolo Manghi, Audrey Renson, Valerie Obenchain, Duy Tin Truong +9 more

Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

Indice penale(2023)10.1038/s41587-023-01688-w
Top 4%
5.0DataRank
Top 4%1390 citations

Francesco Beghini, Fabio Cumbo, Lauren J. McIver, Kelsey N. Thompson, Moreno Zolfo +21 more

Accessible, curated metagenomic data through ExperimentHub

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/103085
Top 10%
2.0DataRank
Top 10%65 citations

Lucas Schiffer, Paolo Manghi, Audrey Renson, Valerie Obenchain, Duy Tin Truong +9 more

Machine Learning and Artificial Intelligence in the Multi-Omics Approach to Gut Microbiota

Gastroenterology(2025)10.1053/j.gastro.2025.02.035
N/A
1.2DataRank · unranked
81 citations

Edoardo Pasolli, Nicola Segata, Gianluca Ianiro, T. Rozera

Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

Nature Medicine(2019)10.1038/s41591-019-0405-7
N/A
1.0DataRank · unranked
1030 citations

Paolo Manghi, Francesco Asnicar, Edoardo Pasolli, Federica Armanini, Moreno Zolfo +36 more

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0

Nature Communications(2020)10.1038/s41467-020-16366-7
N/A
1.0DataRank · unranked
917 citations

Andrew Maltez Thomas, Francesco Beghini, Claudia Mengoni, Serena Manara, Paolo Manghi +13 more

Prevotella diversity, niches and interactions with the human host

Nature Reviews Microbiology(2021)10.1038/s41579-021-00559-y
N/A
0.994DataRank · unranked
753 citations

Edoardo Pasolli, Giulia Masetti, Danilo Ercolini, Nicola Segata, Adrian Tett

Reporting guidelines for human microbiome research: the STORMS checklist

Nature Medicine(2021)10.1038/s41591-021-01552-x
N/A
0.918DataRank · unranked
454 citations

Audrey Renson, Genomic Standards Consortium, Cesare Furlanello, Shaimaa Elsafoury, Ludwig Geistlinger +98 more

International consensus statement on microbiome testing in clinical practice

˜The œLancet. Gastroenterology & hepatology(2024)10.1016/s2468-1253(24)00311-x
N/A
0.657DataRank · unranked
79 citations

Benjamin H. Mullish, Francesco Asnicar, Siew C. Ng, Liping Zhao, Richard Hansen +64 more

MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice

Cell Reports(2023)10.1016/j.celrep.2023.112464
N/A
0.581DataRank · unranked
47 citations

Aitor Blanco‐Míguez, Serena Manara, Amir Nabinejad, Fabio Cumbo, Francesco Beghini +19 more

Meta-analysis of 22,710 human microbiome metagenomes defines an oral-to-gut microbial enrichment score and associations with host health and disease

Nature Communications(2025)10.1038/s41467-025-66888-1
Top 41%
0.461DataRank
Top 41%17 citations

Giacomo Antonello, Lucas Schiffer, Davide Golzato, Andres Wokaty, Francesco Beghini +32 more

Referee report. For: Interactive exploratory data analysis of Integrative Human Microbiome Project data using Metaviz [version 1; peer review: 2 approved]

Faculty of 1000 Research Ltd(2020)10.5256/f1000research.26859.r64700
N/A
0DataRank · unranked
0 citations

Edoardo Pasolli

Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations

Genome biology(2020)10.1186/s13059-020-02042-y
N/A
0DataRank · unranked
128 citations

Edoardo Pasolli, Francesco Asnicar, Kun D. Huang, Adrian Tett, Serena Manara +17 more

Intestinal Blastocystis is linked to healthier diets and more favorable cardiometabolic outcomes in 56,989 individuals from 32 countries

Cell(2024)10.1016/j.cell.2024.06.018
N/A
0DataRank · unranked
86 citations

Long H. Nguyen, Paolo Manghi, Hanseul Kim, Edoardo Pasolli, Sergio Andreu‐Sánchez +31 more

The person-to-person transmission landscape of the gut and oral microbiomes

Nature(2023)10.1038/s41586-022-05620-1
N/A
0DataRank · unranked
452 citations

Aitor Blanco‐Míguez, Paolo Manghi, Francesco Asnicar, Léonard Dubois, Davide Golzato +38 more

Extension of the Segatella copri complex to 13 species with distinct large extrachromosomal elements and associations with host conditions

Cell Host & Microbe(2023)10.1016/j.chom.2023.09.013
N/A
0DataRank · unranked
70 citations

Eric J. C. Gálvez, Edoardo Pasolli, Francesca De Filippis, Lena Amend, Kun D. Huang +20 more