Brian Cleary

Boston University

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 20 papers. Top paper: “Multimodal pooled Perturb-CITE-seq screens in patient models define mechanisms of cancer immune evasion”.

Multimodal pooled Perturb-CITE-seq screens in patient models define mechanisms of cancer immune evasion

Nature Genetics(2021)10.1038/s41588-021-00779-1

N/A

6.5DataRank · unranked

271 citations

Johannes C. Melms, Pratiksha I. Thakore, Kathryn Geiger-Schuller, Patricia Ho, Adrienne Luoma +17 more

Efficient Generation of Transcriptomic Profiles by Random Composite Measurements

Cell(2017)10.1016/j.cell.2017.10.023

N/A

4.7DataRank · unranked

118 citations

Le Cong, Anthea Cheung, Matthew E. Hurles, Prisca Liberali, Brian Cleary

Compressed sensing for highly efficient imaging transcriptomics

Nature Biotechnology(2021)10.1038/s41587-021-00883-x

N/A

2.8DataRank · unranked

49 citations

Brooke Simonton, Jon Bezney, Evan Murray, Shahul Alam, Anubhav Sinha +6 more

Using viral load and epidemic dynamics to optimize pooled testing in resource-constrained settings

Science Translational Medicine(2021)10.1126/scitranslmed.abf1568

N/A

2.7DataRank · unranked

59 citations

James A. Hay, Brendan Blumenstiel, Maegan Harden, Michelle Cipicchio, Jon Bezney +8 more

Scalable genetic screening for regulatory circuits using compressed Perturb-seq

Nature Biotechnology(2023)10.1038/s41587-023-01964-9

N/A

2.2DataRank · unranked

96 citations

Loic Binan, Jon Bezney, Brooke Simonton, Jahanara Freedman, Chris J. Frangieh +8 more

Convergence of coronary artery disease genes onto endothelial cell programs

Nature(2024)10.1038/s41586-024-07022-x

N/A

2.0DataRank · unranked

111 citations

Helen Kang, Shi Fang, Ramcharan Singh Angom, Vivian S. Lee, X. Rosa +22 more

LAMP-Seq enables sensitive, multiplexed COVID-19 diagnostics using molecular barcoding

Nature Biotechnology(2021)10.1038/s41587-021-00966-9

N/A

0.661DataRank · unranked

81 citations

Ricarda Maria Schmithausen, David Li, Max L. Jacobs, Ronja Hollstein, Katja Blumenstock +37 more

Compressed sensing for imaging transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/743039

N/A

0.535DataRank · unranked

8 citations

Brooke Simonton, Jon Bezney, Evan Murray, Shahul Alam, Anubhav Sinha +6 more

Reconstruction of developmental landscapes by optimal-transport analysis of single-cell gene expression sheds light on cellular reprogramming

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/191056

N/A

0.533DataRank · unranked

34 citations

Jian Shu, Marcin Tabaka, Brian Cleary, Vidya Subramanian, Aryeh Solomon +12 more

Compressed Perturb-seq: highly efficient screens for regulatory circuits using random composite perturbations

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.23.525200

N/A

0.505DataRank · unranked

9 citations

Loic Binan, Jon Bezney, Brooke Simonton, Jahanara Freedman, Chris J. Frangieh +8 more

Using viral load and epidemic dynamics to optimize pooled testing in resource constrained settings

medRxiv(2020)10.1101/2020.05.01.20086801

N/A

0.477DataRank · unranked

23 citations

James A. Hay, Brendan Blumenstiel, Maegan Harden, Michelle Cipicchio, Jon Bezney +8 more

The necessity and power of random, under-sampled experiments in biology

arXiv (Cornell University)(2020)10.48550/arxiv.2012.12961

N/A

0.438DataRank · unranked

10 citations

Prisca Liberali, Brian Cleary

Multi-modal pooled Perturb-CITE-Seq screens in patient models define novel mechanisms of cancer immune evasion

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.01.267211

N/A

0.375DataRank · unranked

5 citations

Johannes C. Melms, Pratiksha I. Thakore, Kathryn R. Geiger-Schuller, Patricia Ho, Adrienne Luoma +15 more

Composite measurements and molecular compressed sensing for highly efficient transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/091926

N/A

0.241DataRank · unranked

4 citations

Le Cong, Matthew E. Hurles, Prisca Liberali, Brian Cleary

Simultaneous CRISPR screening and spatial transcriptomics reveal intracellular, intercellular, and functional transcriptional circuits

Cell(2025)10.1016/j.cell.2025.02.012

N/A

0DataRank · unranked

93 citations

Aiping Jiang, Serwah Danquah, Vera Valakh, Brooke Simonton, Jon Bezney +6 more

Single-cell and spatiotemporal profile of ovulation in the mouse ovary

PLoS Biology(2025)10.1371/journal.pbio.3003193

N/A

0DataRank · unranked

7 citations

Caroline E. Kratka, Jeffrey Pea, Cai McCann, Jack Nelson, John Bryan +10 more

Fundamental errors in RNA velocity arising from the omission of cell growth

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.18.695252

N/A

0DataRank · unranked

0 citations

H. Ming, Brian Cleary, Vishal Shah

Author Correction: LAMP-Seq enables sensitive, multiplexed COVID-19 diagnostics using molecular barcoding

Nature Biotechnology(2022)10.1038/s41587-022-01428-6

N/A

0DataRank · unranked

0 citations

Ricarda Maria Schmithausen, David Li, Max L. Jacobs, Ronja Hollstein, Katja Blumenstock +37 more

Simultaneous CRISPR screening and spatial transcriptomics reveals intracellular, intercellular, and functional transcriptional circuits

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.30.569494

N/A

0DataRank · unranked

21 citations

Serwah Danquah, Vera Valakh, Brooke Simonton, Jon Bezney, Ralda Nehme +3 more

Compressed phenotypic screens for complex multicellular models and high-content assays

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.23.525189

N/A

0DataRank · unranked

3 citations

Conner Kummerlowe, Nuo Liu, Walaa E. Kattan, Thomas W. Cheng, Jaime H. Cheah +11 more