🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Alexander J. Ruthenburg

University of Chicago

ORCID: 0000-0003-2709-4564
Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 6%percentile
0.187Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

WITHDRAWN: The cardiac lncRNA Chantico directly regulates Cxcl1 chemokine transcription

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.23.474040
Top 66%
0.187DataRank
Top 66%2 citations

Amoldeep S. Kainth, Megan Rowton, Emery Lu, Gabriela A. Haddad, Amanda J. Keplinger +7 more

Papers

Driven by 19 papers — median percentile 17. Top paper: “Non-canonical H3K79me2-dependent pathways promote the survival of MLL-rearranged leukemia”.

Non-canonical H3K79me2-dependent pathways promote the survival of MLL-rearranged leukemia

eLife(2021)10.7554/elife.64960
N/A
0.865DataRank · unranked
25 citations

Rohan N. Shah, Alexander J. Ruthenburg, William F. Richter

WITHDRAWN: The cardiac lncRNA Chantico directly regulates Cxcl1 chemokine transcription

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.23.474040
Top 66%
0.187DataRank
Top 66%2 citations

Amoldeep S. Kainth, Megan Rowton, Emery Lu, Gabriela A. Haddad, Amanda J. Keplinger +7 more

Non-canonical H3K79me2-dependent pathways promote the survival of MLL-rearranged leukemia

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.04.411215
N/A
0DataRank · unranked
0 citations

Rohan N. Shah, Alexander J. Ruthenburg, William F. Richter

Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation

UNC Libraries(2020)10.17615/23g9-an88
N/A
0DataRank · unranked
0 citations

Takamitsu Hattori, Irina Dementieva, Kohei Kurosawa, Adrian T. Grzybowski, Yupeng Zheng +10 more

An Interactive Database for the Assessment of Histone Antibody Specificity

UNC Libraries(2020)10.17615/fbrg-0y59
Top 100%
0DataRank
Top 100%0 citations

Steven Z. Josefowicz, Erin K. Shanle, Terry Magnuson, Brian D. Strahl, Adrian T. Grzybowski +8 more

Sequence deeper without sequencing more: Bayesian resolution of ambiguously mapped reads

PLoS Computational Biology(2021)10.1371/journal.pcbi.1008926
N/A
0DataRank · unranked
15 citations

Alexander J. Ruthenburg, Rohan N. Shah

Re-evaluating the role of nucleosomal bivalency in early development

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.09.458948
N/A
0DataRank · unranked
6 citations

Adrian T. Grzybowski, Jimmy Elias, Zhonglei Chen, Takamitsu Hattori, Carolin C. Lechner +5 more

Profiling of Nascent Lariat Intermediates Reveals Key Genetic Determinants of the Timing of Human Co-transcriptional Splicing

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.18.464728
N/A
0DataRank · unranked
3 citations

Huilin Zeng, Benjamin Fair, Aiswarya Krishnamohan, Yichen Hou, Johnathon M. Hall +4 more

Profiling lariat intermediates reveals genetic determinants of early and late co-transcriptional splicing

Molecular Cell(2022)10.1016/j.molcel.2022.11.004
N/A
0DataRank · unranked
57 citations

Benjamin Fair, Huilin Zeng, Aiswarya Krishnamohan, Yichen Hou, Johnathon M. Hall +4 more

Merging short and stranded long reads improves transcript assembly

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.13.520317
N/A
0DataRank · unranked
0 citations

Gabriela A. Haddad, Johnathon M. Hall, Alexander J. Ruthenburg, Amoldeep S. Kainth

Merging short and stranded long reads improves transcript assembly

PLoS Computational Biology(2023)10.1371/journal.pcbi.1011576
N/A
0DataRank · unranked
20 citations

Gabriela A. Haddad, Johnathon M. Hall, Alexander J. Ruthenburg, Amoldeep S. Kainth

Specificity Guides Interpretation: On H3K4 Methylation at Enhancers and Broad Promoters

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.16.524067
N/A
0DataRank · unranked
1 citations

Alexander J. Ruthenburg, Rohan N. Shah

The Mediator Kinase Module regulates cell cycle re-entry and transcriptional responses following DNA damage

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.26.530133
N/A
0DataRank · unranked
1 citations

Stefan Bohn, Nevan J. Krogan, James E. Haber, Alexander J. Ruthenburg, Gönen Memişoğlu

Guiding the HBO1 complex function through the JADE subunit

Nature Structural & Molecular Biology(2024)10.1038/s41594-024-01245-2
N/A
0DataRank · unranked
14 citations

Akinori Kanai, Catherine Lachance, Khan L. Cox, Jiuyang Liu, Adrian T. Grzybowski +10 more

Binding mode–guided development of high-performance antibodies targeting site-specific posttranslational modifications

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2411720121
N/A
0DataRank · unranked
5 citations

Rohan N. Shah, Akiko Koide, Alexander J. Ruthenburg, Shohei Koide, Takamitsu Hattori +1 more

A revised model of nuclear actin import: Importin 9 competes with cofilin, profilin, and RanGTP for actin binding

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.111123
N/A
0DataRank · unranked
1 citations

Prithi A Srinivasan, S. Christensen, Cristian Suarez, Alexander J. Ruthenburg, Amanda J. Keplinger

Epigenetic homogeneity in histone methylation underlies sperm programming for embryonic transcription

Nature Communications(2020)10.1038/s41467-020-17238-w
N/A
0DataRank · unranked
52 citations

Angela Simeone, Eva Hörmanseder, Marta Teperek, Vincent Gaggioli, A. O’Doherty +14 more

A revised model of nuclear actin import: Importin 9 competes with cofilin, profilin, and RanGTP for actin binding

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.24.678334
N/A
0DataRank · unranked
0 citations

Prithi A Srinivasan, S. Christensen, Cristian Suarez, Alexander J. Ruthenburg, Amanda J. Keplinger

Chromatin-enriched RNAs mark active and repressive cis-regulation: An analysis of nuclear RNA-seq

PLoS Computational Biology(2020)10.1371/journal.pcbi.1007119
N/A
0DataRank · unranked
7 citations

Zhezhen Wang, Johnathon M. Hall, Carlos Perez-Cervantes, Alexander J. Ruthenburg, Ivan P. Moskowitz +3 more