Timothy A. Whitehead

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 31 papers. Top paper: “Paired heavy- and light-chain signatures contribute to potent SARS-CoV-2 neutralization in public antibody responses”.

Paired heavy- and light-chain signatures contribute to potent SARS-CoV-2 neutralization in public antibody responses

Cell Reports(2021)10.1016/j.celrep.2021.109771

N/A

1.5DataRank · unranked

62 citations

Gabriele Cerutti, Ahmed S. Fahad, Chen‐Hsiang Shen, Matheus Oliveira de Souza, Phinikoula S. Katsamba +29 more

An orthogonalized PYR1-based CID module with reprogrammable ligand-binding specificity

Nature Chemical Biology(2023)10.1038/s41589-023-01447-7

N/A

0.568DataRank · unranked

43 citations

Jingde Qiu, Shuang Wei, Francis C. Peterson, Jesús Beltrán, Angélica V. Medina‐Cucurella +8 more

The importance and future of biochemical engineering

Biotechnology and Bioengineering(2020)10.1002/bit.27364

N/A

0.425DataRank · unranked

16 citations

Scott Banta, William E. Bentley, Michael J. Betenbaugh, Christina Chan, Douglas S. Clark +14 more

One-shot identification of SARS-CoV-2 S RBD escape mutants using yeast screening

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.15.435309

N/A

0.360DataRank · unranked

10 citations

Paul J. Steiner, Monica B. Kirby, Fangzhu Zhao, Cyrus M. Haas, Shawn Barman +6 more

A method for generating user‐defined circular single‐stranded DNA from plasmid DNA using Golden Gate intramolecular ligation

Biotechnology and Bioengineering(2023)10.1002/bit.28471

N/A

0.241DataRank · unranked

4 citations

Paul J. Steiner, Matilda Newton, Zachary T. Baumer, Timothy A. Whitehead, Isabell K. Strawn

An integrated technology for quantitative wide mutational scanning of human antibody Fab libraries

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.16.575852

N/A

0.208DataRank · unranked

3 citations

Monica B. Kirby, Karson M Chrispens, Olivia M. Irvin, Isabell K. Strawn, Cyrus M. Haas +9 more

Regulatory Approved Monoclonal Antibodies Contain Framework Mutations Predicted From Human Antibody Repertoires

Frontiers in Immunology(2021)10.3389/fimmu.2021.728694

N/A

0DataRank · unranked

19 citations

Sophia A. Ulmer, Emily R. Rhodes, Matías Gutiérrez-González, Brandon J. DeKosky, Kayla G. Sprenger +2 more

Identification of SARS-CoV-2 S RBD escape mutants using yeast screening and deep mutational scanning

STAR Protocols(2021)10.1016/j.xpro.2021.100869

N/A

0DataRank · unranked

10 citations

Irené M. Francino-Urdaniz, Paul J. Steiner, Timothy A. Whitehead, Cyrus M. Haas

Paired heavy and light chain signatures contribute to potent SARS-CoV-2 neutralization in public antibody responses

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2020.12.31.424987

N/A

0DataRank · unranked

26 citations

Gabriele Cerutti, Ahmed S. Fahad, Chen‐Hsiang Shen, Matheus Oliveira de Souza, Phinikoula S. Katsamba +29 more

Stabilization of the SARS-CoV-2 Receptor Binding Domain by Protein Core Redesign and Deep Mutational Scanning

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.22.469552

N/A

0DataRank · unranked

2 citations

Jonathan J. Weinstein, Paul J. Steiner, Annette H. Erbse, Sarel J. Fleishman, Timothy A. Whitehead +1 more

Regulatory approved monoclonal antibodies contain framework mutations predicted from human antibody repertoires

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.22.449488

N/A

0DataRank · unranked

1 citations

Sophia A. Ulmer, Emily R. Rhodes, Matías Gutiérrez-González, Brandon J. DeKosky, Kayla G. Sprenger +2 more

Rapid biosensor development using plant hormone receptors as reprogrammable scaffolds

Nature Biotechnology(2022)10.1038/s41587-022-01364-5

N/A

0DataRank · unranked

97 citations

Paul J. Steiner, Matthew A. Bedewitz, Shuang Wei, Francis C. Peterson, Zongbo Li +14 more

Stabilization of the SARS-CoV-2 receptor binding domain by protein core redesign and deep mutational scanning

Protein Engineering Design and Selection(2022)10.1093/protein/gzac002

N/A

0DataRank · unranked

13 citations

Jonathan J. Weinstein, Paul J. Steiner, Annette H. Erbse, Sarel J. Fleishman, Timothy A. Whitehead +1 more

Engineering SARS-CoV-2 neutralizing antibodies for increased potency and reduced viral escape pathways

iScience(2022)10.1016/j.isci.2022.104914

N/A

0DataRank · unranked

14 citations

Celina Keating, Gabriel Ozorowski, Namir Shaabani, Irené M. Francino-Urdaniz, Shawn Barman +18 more

A method for generating user-defined circular single-stranded DNA from plasmid DNA using Golden Gate intramolecular ligation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.21.517425

N/A

0DataRank · unranked

3 citations

Paul J. Steiner, Matilda Newton, Timothy A. Whitehead, Isabell K. Strawn

Engineering SARS-CoV-2 neutralizing antibodies for increased potency and reduced viral escape

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.06.475303

N/A

0DataRank · unranked

0 citations

Celina Keating, Gabriel Ozorowski, Namir Shaabani, Irené M. Francino-Urdaniz, Shawn Barman +18 more

Standardizing cassette‐based deep mutagenesis by Golden Gate assembly

Biotechnology and Bioengineering(2023)10.1002/bit.28564

N/A

0DataRank · unranked

17 citations

Irené M. Francino-Urdaniz, Zachary T. Baumer, Timothy A. Whitehead, Nicolas Daffern

High-Performance Cannabinoid Sensor Empowered by Plant Hormone Receptors and Antifouling Magnetic Nanorods

ACS Sensors(2023)10.1021/acssensors.3c01488

N/A

0DataRank · unranked

4 citations

Yuyang Shen, Jesús Beltrán, Hao Tian, Matthew A. Bedewitz, Ian Wheeldon +4 more

Benchmarking cassette-based deep mutagenesis by Golden Gate assembly

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.13.536781

N/A

0DataRank · unranked

3 citations

Irené M. Francino-Urdaniz, Zachary T. Baumer, Timothy A. Whitehead, Nicolas Daffern

An integrated technology for quantitative wide mutational scanning of human antibody Fab libraries

Nature Communications(2024)10.1038/s41467-024-48072-z

N/A

0DataRank · unranked

22 citations

Monica B. Kirby, Karson M Chrispens, Olivia M. Irvin, Isabell K. Strawn, Cyrus M. Haas +9 more

Enhanced T cell receptor specificity through framework engineering

Frontiers in Immunology(2024)10.3389/fimmu.2024.1345368

N/A

0DataRank · unranked

13 citations

Cory M. Ayres, Angélica V. Medina‐Cucurella, Timothy A. Whitehead, Brian M. Baker, Aaron M. Rosenberg

Rationalizing diverse binding mechanisms to the same protein fold: insights for ligand recognition and biosensor design

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.25.586677

N/A

0DataRank · unranked

1 citations

Anika J. Friedman, Rachel Chayer, Brian M. Petersen, Joel L. Kaar, Michael R. Shirts +2 more

Retrospective SARS-CoV-2 human antibody development trajectories are largely sparse and permissive

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2412787122

N/A

0DataRank · unranked

8 citations

Brian M. Petersen, Jonathan G. Faris, Siobhan P. Kells, Kayla G. Sprenger, Timothy A. Whitehead +1 more

Unusually broad-spectrum small-molecule sensing using a single protein scaffold

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2519924122

N/A

0DataRank · unranked

6 citations

Jesús Beltrán, W George, Chase Lenert-Mondou, Norman Seder, Zoe I. Davis +6 more

Computational design of dynamic biosensors for emerging synthetic opioids

Zenodo (CERN European Organization for Nuclear Research)(2025)10.5281/zenodo.15298584

N/A

0DataRank · unranked

1 citations

Lenert-Mondou, Chase, Chayer, Rachel, Samuel D. Swift, Zachary T. Baumer, Delaney, Ryan +10 more

Computational design of dynamic biosensors for emerging synthetic opioids

Zenodo (CERN European Organization for Nuclear Research)(2025)10.5281/zenodo.15298585

N/A

0DataRank · unranked

0 citations

Lenert-Mondou, Chase, Chayer, Rachel, Samuel D. Swift, Zachary T. Baumer, Delaney, Ryan +10 more

A Method for User-defined Mutagenesis by Integrating Oligo Pool Synthesis Technology with Nicking Mutagenesis

BIO-PROTOCOL(2020)10.21769/bioprotoc.3697

N/A

0DataRank · unranked

10 citations

Zachary T. Baumer, Timothy A. Whitehead, Paul J. Steiner

Community-Wide Assessment of Protein-Interface Modeling Suggests Improvements to Design Methodology

UNC Libraries(2020)10.17615/35z7-9284

N/A

0DataRank · unranked

0 citations

Thom Vreven, Şefik Kerem Ovalı, Jacob E. Corn, Eva‐Maria Strauch, Julie C. Mitchell +27 more

One-shot identification of SARS-CoV-2 S RBD escape mutants using yeast screening

Cell Reports(2021)10.1016/j.celrep.2021.109627

N/A

0DataRank · unranked

52 citations

Paul J. Steiner, Monica B. Kirby, Fangzhu Zhao, Cyrus M. Haas, Shawn Barman +7 more

An overview of methods for the structural and functional mapping of epitopes recognized by anti-SARS-CoV-2 antibodies

RSC Chemical Biology(2021)10.1039/d1cb00169h

N/A

0DataRank · unranked

23 citations

Timothy A. Whitehead, Irené M. Francino-Urdaniz

Optimization of multi-site nicking mutagenesis for generation of large, user-defined combinatorial libraries

Protein Engineering Design and Selection(2021)10.1093/protein/gzab017

N/A

0DataRank · unranked

21 citations

Angélica V. Medina‐Cucurella, Zachary T. Baumer, Timothy A. Whitehead, Monica B. Kirby