Hiam Abdala‐Valencia

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 47 papers. Top paper: “Resetting proteostasis with ISRIB promotes epithelial differentiation to attenuate pulmonary fibrosis”.

Resetting proteostasis with ISRIB promotes epithelial differentiation to attenuate pulmonary fibrosis

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2101100118

N/A

0.688DataRank · unranked

97 citations

Nikolay S. Markov, Ziyan Lu, Raul Piseaux Aillon, Saul Soberanes, Constance E. Runyan +19 more

Prolonged exposure to lung-derived cytokines is associated with activation of microglia in patients with COVID-19

JCI Insight(2024)10.1172/jci.insight.178859

N/A

0.457DataRank · unranked

20 citations

Taylor A. Poor, Lango Sichizya, Estefani Diaz, Joseph I. Bailey, Sahil Soni +14 more

Inducible CCR2+ nonclassical monocytes mediate the regression of cancer metastasis

Journal of Clinical Investigation(2024)10.1172/jci179527

N/A

0.442DataRank · unranked

18 citations

Ziyou Ren, Can Tan, Felix Nunez-Santana, Megan E. Kelly, Yuanqing Yan +17 more

AMPK is necessary for Treg functional adaptation to microenvironmental stress during malignancy and viral pneumonia

Journal of Clinical Investigation(2025)10.1172/jci179572

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0.434DataRank · unranked

17 citations

Jonathan Gurkan, Qianli Liu, Nurbek Mambetsariev, Carla Reyes Flores, Kathryn A. Helmin +7 more

Myeloid Zfhx3 deficiency protects against hypercapnia-induced suppression of host defense against influenza A virus

JCI Insight(2024)10.1172/jci.insight.170316

N/A

0.421DataRank · unranked

9 citations

Fei Chen, Francisco J. González-González, Hiroaki Matsuda, Aisha Nair, Hiam Abdala‐Valencia +5 more

Influenza-induced activation of recruited alveolar macrophages during the early inflammatory phase drives lung injury and lethality

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.08.141309

N/A

0.277DataRank · unranked

3 citations

Kishore R. Anekalla, Yuan‐Shih Hu, Jennifer Davis, Mark Ciesielski, Gaurav Gadhvi +11 more

Transitions in lung microbiota landscape associate with distinct patterns of pneumonia progression

Cell Host & Microbe(2025)10.1016/j.chom.2025.11.011

N/A

0.269DataRank · unranked

5 citations

Stefanie Huttelmaier, Chiagozie I. Pickens, Anahid A. Moghadam, Hiam Abdala‐Valencia, Jiaxian Shen +95 more

Maintenance DNA methylation is essential for regulatory T cell development and stability of suppressive function

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.03.926949

N/A

0DataRank · unranked

13 citations

Luisa Morales‐Nebreda, Manuel A. Torres Acosta, Kishore R. Anekalla, Shang-Yang Chen, Hiam Abdala‐Valencia +7 more

Resetting proteostasis with ISRIB prevents pulmonary fibrosis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.26.965566

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0DataRank · unranked

2 citations

Nikolay S. Markov, Ziyan Lu, Raul Piseaux Aillon, Saul Soberanes, Constance E. Runyan +15 more

Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia

Nature(2021)10.1038/s41586-020-03148-w

N/A

0DataRank · unranked

778 citations

Luisa Morales‐Nebreda, Nikolay S. Markov, Suchitra Swaminathan, Melissa Querrey, Estefany Rios-Guzman +59 more

The lung microenvironment shapes a dysfunctional response of alveolar macrophages in aging

Journal of Clinical Investigation(2021)10.1172/jci140299

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0DataRank · unranked

180 citations

Ziyou Ren, Nikita Joshi, Satoshi Watanabe, Thomas Stoeger, Monica Chi +29 more

Aging imparts cell-autonomous dysfunction to regulatory T cells during recovery from influenza pneumonia

JCI Insight(2021)10.1172/jci.insight.141690

N/A

0DataRank · unranked

80 citations

Kathryn A. Helmin, Manuel A. Torres Acosta, Nikolay S. Markov, Jennifer Yuan-Shih Hu, Anthony M. Joudi +5 more

Crosstalk between nonclassical monocytes and alveolar macrophages mediates transplant ischemia-reperfusion injury through classical monocyte recruitment

JCI Insight(2021)10.1172/jci.insight.147282

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0DataRank · unranked

68 citations

Emilia Lecuona, Qiang Wu, Wenbin Yang, Felix Nunez-Santana, Mahzad Akbarpour +16 more

Elevation of activated neutrophils in chronic rhinosinusitis with nasal polyps

Journal of Allergy and Clinical Immunology(2021)10.1016/j.jaci.2021.11.023

N/A

0DataRank · unranked

63 citations

Aiko I. Klingler, Whitney W. Stevens, Lydia Suh, Bruce K. Tan, Anju T. Peters +9 more

Age-related Differences in the Nasal Mucosal Immune Response to SARS-CoV-2

American Journal of Respiratory Cell and Molecular Biology(2021)10.1165/rcmb.2021-0292oc

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0DataRank · unranked

48 citations

Andrew D. Prigge, Kishore R. Anekalla, Avani Shukla, Hanh Chi Do Umehara, Leah Setar +13 more

Transcriptional profiling of pediatric cholestatic livers identifies three distinct macrophage populations

PLoS ONE(2021)10.1371/journal.pone.0244743

N/A

0DataRank · unranked

40 citations

Shang-Yang Chen, Gaurav Gadhvi, Liang Feng, Kyle D. Gromer, Hiam Abdala‐Valencia +11 more

PAX9 Determines Epigenetic State Transition and Cell Fate in Cancer

Cancer Research(2021)10.1158/0008-5472.can-21-1114

N/A

0DataRank · unranked

24 citations

Aileen Patricia Szczepanski, Natsumi Tsuboyama, Hiam Abdala‐Valencia, Young Ah Goo, Benjamin D. Singer +4 more

The proteostatic network chaperome is downregulated in F508del homozygote cystic fibrosis

Journal of Cystic Fibrosis(2021)10.1016/j.jcf.2020.12.018

N/A

0DataRank · unranked

7 citations

Michael Alexander, Basil Khuder, Yuliya Politanska, Hiam Abdala‐Valencia, G. R. Scott Budinger +4 more

Comparative Study of Epithelial Entry Gene Expression of SARS-Cov-2 and Other Human Viral Species in Asthma: Differences by Sex, Airway Location Aand Disease Endotype

Preprints.org(2021)10.20944/preprints202101.0266.v1

N/A

0DataRank · unranked

1 citations

Lucas F. Loffredo, Hiam Abdala‐Valencia, Sergejs Berdnikovs, Mackenzie E. Coden

Aging is associated with a systemic length-associated transcriptome imbalance

Nature Aging(2022)10.1038/s43587-022-00317-6

N/A

0DataRank · unranked

116 citations

Rogan A. Grant, Alexandra C. McQuattie‐Pimentel, Kishore R. Anekalla, Sophia S. Liu, Heliodoro Tejedor-Navarro +14 more

Expression of vimentin alters cell mechanics, cell-cell adhesion, and gene expression profiles suggesting the induction of a hybrid EMT in human mammary epithelial cells

Frontiers in Cell and Developmental Biology(2022)10.3389/fcell.2022.929495

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0DataRank · unranked

61 citations

Amir Vahabikashi, Haiqian Yang, Jun Zhang, Kelly Vazquez, Dhivyaa Rajasundaram +7 more

Placental dysfunction influences fetal monocyte subpopulation gene expression in preterm birth

JCI Insight(2022)10.1172/jci.insight.155482

N/A

0DataRank · unranked

12 citations

Robert Birkett, Erika T. Lin, Linda M. Ernst, William A. Grobman, Suchitra Swaminathan +5 more

Cilia-related gene signature in the nasal mucosa correlates with disease severity and outcomes in critical respiratory syncytial virus bronchiolitis

Frontiers in Immunology(2022)10.3389/fimmu.2022.924792

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0DataRank · unranked

7 citations

Andrew D. Prigge, Leah Setar, Kishore R. Anekalla, Hahn Chi Do-Umehara, Hiam Abdala‐Valencia +6 more

Individual target pharmacokinetic/pharmacodynamic attainment rates among meropenem-treated patients admitted to the ICU with hospital-acquired pneumonia

Journal of Antimicrobial Chemotherapy(2022)10.1093/jac/dkac245

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0DataRank · unranked

4 citations

Marc H. Scheetz, Helen K. Donnelly, Alvaro Donayre, Mengjia Kang, Estefani Diaz +95 more

Hypercapnia limits β-catenin-mediated alveolar type 2 cell progenitor function by altering Wnt production from adjacent fibroblasts

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.12.475264

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0DataRank · unranked

0 citations

Lynn C. Welch, Natalia Magnani, Ziyou Ren, Patricia L. Brazee, Diego Celli +14 more

Astrocyte reactivity and inflammation-induced depression-like behaviors are regulated by Orai1 calcium channels

Nature Communications(2023)10.1038/s41467-023-40968-6

N/A

0DataRank · unranked

120 citations

Kirill S. Korshunov, Rogan A. Grant, Megan E. Martin, Hiam Abdala‐Valencia, G. R. Scott Budinger +3 more

Lung transplantation for patients with severe COVID-19

Science Translational Medicine(2020)10.1126/scitranslmed.abe4282

N/A

0DataRank · unranked

335 citations

Melissa Querrey, Nikolay S. Markov, Samuel S. Kim, Chitaru Kurihara, Rafael Garza‐Castillon +10 more

Single-cell sequencing of a novel model of neonatal bile duct ligation in mice identifies macrophage heterogeneity in obstructive cholestasis

Scientific Reports(2023)10.1038/s41598-023-41207-0

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0DataRank · unranked

5 citations

Kyle D. Gromer, Gaurav Gadhvi, Alyssa Kriegermeier, Jiao-Jing Wang, Hiam Abdala‐Valencia +7 more

Myeloid Zfhx3 Deficiency Protects Against Hypercapnia-induced Suppression of Host Defense Against Influenza A Virus

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.28.530480

N/A

0DataRank · unranked

2 citations

Fei Chen, Francisco J. González-González, Hiroaki Matsuda, Aisha Nair, Hiam Abdala‐Valencia +5 more

AMP-activated protein kinase is necessary for Treg cell functional adaptation to microenvironmental stress

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.29.568904

N/A

0DataRank · unranked

2 citations

Nurbek Mambetsariev, Carla P. Reyes Flores, Kathryn A. Helmin, Qianli Liu, Anthony M. Joudi +7 more

Profibrotic monocyte-derived alveolar macrophages are expanded in patients with persistent respiratory symptoms and radiographic abnormalities after COVID-19

Nature Immunology(2024)10.1038/s41590-024-01975-x

N/A

0DataRank · unranked

55 citations

Connor Puritz, Karolina J. Senkow, Nikolay S. Markov, Estefani Diaz, Emmy Jonasson +27 more

Mitochondria regulate proliferation in adult cardiac myocytes

Journal of Clinical Investigation(2024)10.1172/jci165482

N/A

0DataRank · unranked

23 citations

Kimberly A. Smith, Paul T. Mungai, V. Joseph Dudley, Kathryn A. Helmin, Benjamin D. Singer +20 more

Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia

Nature Immunology(2024)10.1038/s41590-024-01914-w

N/A

0DataRank · unranked

17 citations

Ziyou Ren, Karolina J. Senkow, Rogan A. Grant, Catherine A. Gao, Elizabeth S. Malsin +91 more

Transitions in lung microbiota landscape associate with distinct patterns of pneumonia progression

medRxiv(2024)10.1101/2024.08.02.24311426

N/A

0DataRank · unranked

2 citations

Chiagozie I. Pickens, Stefanie Huttelmaier, Anahid A. Moghadam, Hiam Abdala‐Valencia, NU SCRIPT Study Investigators +5 more

Maintenance DNA methylation is required for induced Treg reparative function following viral pneumonia in mice

Journal of Clinical Investigation(2025)10.1172/jci192925

N/A

0DataRank · unranked

6 citations

Jonathan Gurkan, Qianli Liu, Elizabeth M. Steinert, Manuel A. Torres Acosta, Kathryn A. Helmin +7 more

Novel enzyme-based reduced representation method for DNA methylation profiling with low inputs

Nucleic Acids Research(2025)10.1093/nar/gkaf558

N/A

0DataRank · unranked

1 citations

Kathryn A. Helmin, Zachary D. Dortzbach, Carla P. Reyes Flores, Manuel A. Torres Acosta, Jonathan Gurkan +9 more

Large language models accurately identify immunosuppression in intensive care unit patients

Journal of the American Medical Informatics Association(2025)10.1093/jamia/ocaf141

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0DataRank · unranked

1 citations

Mengjia Kang, M. Bak, Steven Tran, Anna Pawlowski, Prasanth Nannapaneni +87 more

Plasminogen activator inhibitor 1 promotes aortic aging–like pathophysiology in humans and mice

Journal of Clinical Investigation(2025)10.1172/jci196714

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0DataRank · unranked

1 citations

Anthony Kalousdian, Mesut Eren, Saul Soberanes, Andrew Decker, Elizabeth Lux +11 more

Tissue-resident skeletal muscle macrophages promote recovery from viral pneumonia-induced sarcopenia in normal aging

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.09.631996

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0DataRank · unranked

3 citations

Lucy Luo, Lynn C. Welch, Ziyan Lu, Fei Chen, M. Schleck +15 more

Profibrotic monocyte-derived alveolar macrophages as a biomarker and therapeutic target in systemic sclerosis-associated interstitial lung disease

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.07.669006

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0DataRank · unranked

3 citations

Anthony J. Esposito, Karolina J. Senkow, M. Schleck, Luisa Cusick, Zhan Yu +61 more

Hypercapnia alters stroma-derived Wnt production to limit β-catenin signaling and proliferation in AT2 cells

JCI Insight(2023)10.1172/jci.insight.159331

N/A

0DataRank · unranked

15 citations

Lynn C. Welch, Natalia Magnani, Ziyou Ren, Hyebin Han, Patricia L. Brazee +15 more

Posttranslational Regulation of the Exon Skipping Machinery Controls Aberrant Splicing in Leukemia

Cancer Discovery(2020)10.1158/2159-8290.cd-19-1436

N/A

0DataRank · unranked

102 citations

Cuijuan Han, Eric Wang, Adam H. Lorch, Valentina Serafin, Byoung-Kyu Cho +39 more

Maintenance DNA methylation is essential for regulatory T cell development and stability of suppressive function

Journal of Clinical Investigation(2020)10.1172/jci137712

N/A

0DataRank · unranked

90 citations

Luisa Morales‐Nebreda, Manuel A. Torres Acosta, Kishore R. Anekalla, Shang-Yang Chen, Hiam Abdala‐Valencia +7 more

Eosinophil accumulation in postnatal lung is specific to the primary septation phase of development

Scientific Reports(2020)10.1038/s41598-020-61420-5

N/A

0DataRank · unranked

37 citations

Mackenzie E. Coden, Brian M. Jeong, Matthew T. Walker, Kishore R. Anekalla, Ton C. Doan +7 more

Impaired phagocytic function in CX3CR1 + tissue‐resident skeletal muscle macrophages prevents muscle recovery after influenza A virus‐induced pneumonia in old mice

Aging Cell(2020)10.1111/acel.13180

N/A

0DataRank · unranked

39 citations

Lynn C. Welch, Emilia Lecuona, Masahiko Shigemura, Luciano Amarelle, Hiam Abdala‐Valencia +14 more

Epithelial cell–specific loss of function of Miz1 causes a spontaneous COPD-like phenotype and up-regulates Ace2 expression in mice

Science Advances(2020)10.1126/sciadv.abb7238

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0DataRank · unranked

23 citations

Cong Chen, Qiao Zhang, Alexander V. Misharin, Hiam Abdala‐Valencia, S. Marina Casalino‐Matsuda +21 more

Alveolitis in severe SARS-CoV-2 pneumonia is driven by self-sustaining circuits between infected alveolar macrophages and T cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.05.238188

N/A

0DataRank · unranked

25 citations

Luisa Morales‐Nebreda, Nikolay S. Markov, Suchitra Swaminathan, Estefany Rios-Guzman, Darryl A. Abbott +30 more