David A. Agard

Also affiliated with Chan Zuckerberg Biohub San Francisco, Chan Zuckerberg Initiative (United States)

Biochemistry, Genetics and Molecular BiologyMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 60 papers. Top paper: “A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Potential Drug-Repurposing”.

A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Potential Drug-Repurposing

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.22.002386

N/A

14.3DataRank · unranked

456 citations

Gwendolyn M. Jang, Mehdi Bouhaddou, Jiewei Xu, Kirsten Obernier, Matthew J. O’Meara +95 more

Viral Capsid Trafficking along Treadmilling Tubulin Filaments in Bacteria

Cell(2019)10.1016/j.cell.2019.05.032

N/A

2.4DataRank · unranked

92 citations

Kanika Khanna, Katrina T. Nguyen, Joseph Sugie, MacKennon E. Egan, Marcella L. Erb +8 more

MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy

Nature Methods(2017)10.1038/nmeth.4193

N/A

1.4DataRank · unranked

8787 citations

Eugene Palovcak, Jean-Paul Armache, Kliment A. Verba, Yifan Cheng, David A. Agard +3 more

A SARS-CoV-2 protein interaction map reveals targets for drug repurposing

Nature(2020)10.1038/s41586-020-2286-9

N/A

1.3DataRank · unranked

4829 citations

Gwendolyn M. Jang, Mehdi Bouhaddou, Jiewei Xu, Kirsten Obernier, Kris M. White +95 more

Interactions between mTORC2 core subunits Rictor and mSin1 dictate selective and context-dependent phosphorylation of substrate kinases SGK1 and Akt

Journal of Biological Chemistry(2022)10.1016/j.jbc.2022.102288

N/A

1.1DataRank · unranked

35 citations

Junliang Chen, Enzo Takagi, Feng Wang, Bidisha Saha, Xi Liu +9 more

CryoEM and AI reveal a structure of SARS-CoV-2 Nsp2, a multifunctional protein involved in key host processes

Research Square(2021)10.21203/rs.3.rs-515215/v1

N/A

0.796DataRank · unranked

17 citations

Meghna Gupta, Caleigh M. Azumaya, Michelle Moritz, Sergei Pourmal, Amy Diallo +75 more

CryoEM and AI reveal a structure of SARS-CoV-2 Nsp2, a multifunctional protein involved in key host processes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.10.443524

N/A

0.666DataRank · unranked

84 citations

Caleigh M. Azumaya, Michelle Moritz, Sergei Pourmal, Amy Diallo, Gregory E. Merz +75 more

De novo protein identification in mammalian sperm using in situ cryoelectron tomography and AlphaFold2 docking

Cell(2023)10.1016/j.cell.2023.09.017

N/A

0.661DataRank · unranked

81 citations

Momoko Shiozaki, Kelsey M. Haas, Will M. Skinner, Shumei Zhao, Caiying Guo +8 more

Practical considerations for using K3 cameras in CDS mode for high-resolution and high-throughput single particle cryo-EM

Journal of Structural Biology(2021)10.1016/j.jsb.2021.107745

N/A

0.648DataRank · unranked

74 citations

Caleigh M. Azumaya, Eric Tse, David Bulkley, Matthew B. Harrington, Glenn G. Gilbèrt +6 more

Improved Analysis of Cross-Linking Mass Spectrometry Data with Kojak 2.0, Advanced by Integration into the Trans-Proteomic Pipeline

Journal of Proteome Research(2023)10.1021/acs.jproteome.2c00670

N/A

0.442DataRank · unranked

18 citations

David Shteynberg, Alex Zelter, Michael Riffle, Andrew S. Lyon, David A. Agard +6 more

Cryo-EM analysis of human mitochondrial Hsp90 in multiple tetrameric states

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.04.368837

N/A

0.385DataRank · unranked

12 citations

Ming Sun, Daniel Elnatan, Adam G. Larson, David A. Agard, Yanxin Liu

De novo protein identification in mammalian sperm using high-resolution in situ cryo-electron tomography

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.28.510016

N/A

0.331DataRank · unranked

4 citations

Momoko Shiozaki, Kelsey M. Haas, Shumei Zhao, Caiying Guo, Benjamin J. Polacco +6 more

CM1-driven assembly and activation of Yeast γ-Tubulin Small Complex underlies microtubule nucleation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.21.392803

N/A

0.241DataRank · unranked

4 citations

Andrew S. Lyon, Alex Zelter, Shruthi Viswanath, Alison M. Maxwell, Michael J. MacCoss +5 more

In situ cryo-electron tomography reveals the asymmetric architecture of mammalian sperm axonemes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.15.492011

N/A

0.241DataRank · unranked

4 citations

Garrett Greenan, Momoko Shiozaki, Yanxin Liu, Will M. Skinner, Xiaowei Zhao +8 more

The complex developmental mechanisms of nucleus-forming jumbo phages

Current Opinion in Microbiology(2025)10.1016/j.mib.2025.102676

N/A

0.230DataRank · unranked

3 citations

David A. Agard, Joseph Bondy‐Denomy, Deepto Mozumdar

The ΦPA3 Phage Nucleus is Enclosed by a Self-Assembling, 2D Crystalline Lattice

Research Square(2022)10.21203/rs.3.rs-1531074/v1

N/A

0.127DataRank · unranked

1 citations

Axel F. Brilot, Melissa Mèndez-Moran, Minkyung Baek, Junrui Li, Claire Kokontis +5 more

Proteomic analysis of microtubule inner proteins (MIPs) in Rib72 null Tetrahymena cells reveals functional MIPs

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.02.324467

N/A

0.104DataRank · unranked

1 citations

Brian A. Bayless, Sam Li, Daniel Stoddard, Westley Heydeck, Christopher C. Ebmeier +9 more

Electron cryo-tomography structure of axonemal doublet microtubule from Tetrahymena thermophila

Life Science Alliance(2021)10.26508/lsa.202101225

N/A

0DataRank · unranked

26 citations

José‐Jesús Fernández, Amy S. Fabritius, David A. Agard, Mark Winey, Sam Li

Entropy-regularized deconvolution of cellular cryotransmission electron tomograms

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2108738118

N/A

0DataRank · unranked

26 citations

Michael Elbaum, Muthuvel Arigovindan, Zvi Kam, David A. Agard, Elizabeth Villa +2 more

Proteomic analysis of microtubule inner proteins (MIPs) in Rib72 null Tetrahymena cells reveals functional MIPs

Molecular Biology of the Cell(2021)10.1091/mbc.e20-12-0786

N/A

0DataRank · unranked

25 citations

Brian A. Bayless, Sam Li, Daniel Stoddard, Westley Heydeck, Christopher C. Ebmeier +9 more

Microtubules form by progressively faster tubulin accretion, not by nucleation–elongation

The Journal of Cell Biology(2021)10.1083/jcb.202012079

N/A

0DataRank · unranked

14 citations

Michelle Moritz, David A. Agard, Luke M. Rice

Entropy Regularized Deconvolution of Cellular Cryo-Transmission Electron Tomograms

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.26.441469

N/A

0DataRank · unranked

6 citations

Michael Elbaum, Muthuvel Arigovindan, Zvi Kam, David A. Agard, Elizabeth Villa +2 more

Electron Cryo-Tomography Structure of Axonemal Doublet Microtubule from Tetrahymena thermophila

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.13.452106

N/A

0DataRank · unranked

6 citations

José‐Jesús Fernández, Amy S. Fabritius, David A. Agard, Mark Winey, Sam Li

Structures of the active HER2/HER3 receptor complex reveal dynamics at the dimerization interface induced by binding of a single ligand

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.03.442258

N/A

0DataRank · unranked

2 citations

Raphael Trenker, Tarjani Thaker, Feng Wang, David A. Agard, Kliment A. Verba +2 more

AreTomo: An integrated software package for automated marker-free, motion-corrected cryo-electron tomographic alignment and reconstruction

Journal of Structural Biology X(2022)10.1016/j.yjsbx.2022.100068

N/A

0DataRank · unranked

290 citations

Georg Wolff, Garrett Greenan, Zhen Chen, Frank G. A. Faas, Montserrat Bárcena +4 more

A family of novel immune systems targets early infection of nucleus-forming jumbo phages

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.17.508391

N/A

0DataRank · unranked

23 citations

Jingwen Guan, Surabhi Hareendranath, Emily Crawford, David A. Agard, Kira S. Makarova +3 more

Hsp90 provides a platform for kinase dephosphorylation by PP5

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.02.506407

N/A

0DataRank · unranked

4 citations

Carlos Nowotny, Daniel Coutandin, Feng Wang, Mariano Tabios, David A. Agard +1 more

Cryo-EM reveals how Hsp90 and FKBP immunophilins co-regulate the glucocorticoid receptor

Nature Structural & Molecular Biology(2023)10.1038/s41594-023-01128-y

N/A

0DataRank · unranked

71 citations

Jill L. Johnson, David A. Agard, Feng Wang

In situ cryo-electron tomography reveals the asymmetric architecture of mammalian sperm axonemes

Nature Structural & Molecular Biology(2023)10.1038/s41594-022-00861-0

N/A

0DataRank · unranked

68 citations

Garrett Greenan, Momoko Shiozaki, Yanxin Liu, Will M. Skinner, Xiaowei Zhao +7 more

Hsp90 provides a platform for kinase dephosphorylation by PP5

Nature Communications(2023)10.1038/s41467-023-37659-7

N/A

0DataRank · unranked

50 citations

Carlos Nowotny, Daniel Coutandin, Feng Wang, Mariano Tabios, David A. Agard +1 more

The ϕPA3 phage nucleus is enclosed by a self-assembling 2D crystalline lattice

Nature Communications(2023)10.1038/s41467-023-36526-9

N/A

0DataRank · unranked

41 citations

Axel F. Brilot, Melissa Mèndez-Moran, Claire Kokontis, Minkyung Baek, Junrui Li +5 more

Next-generation proteomics for quantitative Jumbophage-bacteria interaction mapping

Nature Communications(2023)10.1038/s41467-023-40724-w

N/A

0DataRank · unranked

34 citations

Deepto Mozumdar, Claire Kokontis, Melissa Mèndez-Moran, Eliza Nieweglowska, Adrian Pelin +7 more

Next-generation interaction proteomics for quantitative Jumbophage-bacteria interaction mapping

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.13.523954

N/A

0DataRank · unranked

0 citations

Deepto Mozumdar, Claire Kokontis, Melissa Mèndez-Moran, Eliza Nieweglowska, Adrian Pelin +7 more

Characterization of a lipid-based jumbo phage compartment as a hub for early phage infection

Cell Host & Microbe(2024)10.1016/j.chom.2024.05.016

N/A

0DataRank · unranked

29 citations

Andrea Fossati, Erica Stevenson, Jingwen Guan, Eliza Nieweglowska, Sanjana Rao +4 more

Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking

Nature Communications(2024)10.1038/s41467-024-46178-y

N/A

0DataRank · unranked

25 citations

Eugene Palovcak, Anton A. A. Smith, Henriette Elisabeth Autzen, Elise N. Muñoz, Zanlin Yu +6 more

Poc1 bridges basal body inner junctions to promote triplet microtubule integrity and connections

The Journal of Cell Biology(2024)10.1083/jcb.202311104

N/A

0DataRank · unranked

20 citations

Sam Li, David A. Agard, Chad G. Pearson, Marisa D. Ruehle

Defining the constituents and functions of a lipid-based jumbo phage compartment

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.24.586471

N/A

0DataRank · unranked

3 citations

Andrea Fossati, Erica Stevenson, Jingwen Guan, Eliza Nieweglowska, Sanjana Rao +4 more

Jumbo phage killer immune system targets early infection of nucleus-forming phages

Cell(2025)10.1016/j.cell.2025.02.016

N/A

0DataRank · unranked

23 citations

Linlin Guan, Isabelle Becher, Kira S. Makarova, Xueli Cao, Surabhi Hareendranath +13 more

Real-space heterogeneous reconstruction, refinement, and disentanglement of CryoEM conformational states with HetSIREN

Nature Communications(2025)10.1038/s41467-025-59135-0

N/A

0DataRank · unranked

12 citations

Carlos P. Mata, Feng Wang, Deli Irene, James Krieger, David A. Agard +4 more

The structure of basal body inner junctions from Tetrahymena revealed by electron cryo-tomography

The EMBO Journal(2025)10.1038/s44318-025-00392-6

N/A

0DataRank · unranked

6 citations

José‐Jesús Fernández, Marisa D. Ruehle, Rachel A. Howard-Till, Amy S. Fabritius, Chad G. Pearson +3 more

Intralysosomal Amyloidogenesis and Proximity Labeling by Cathepsin C

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.23.696283

N/A

0DataRank · unranked

6 citations

Robert T. O’Neill, Idil Itir Demiralp, Seth Allen, Daniel Serwas, Hannah Siems +9 more

A novel lncRNA FAM151B-DT regulates autophagy and degradation of aggregation prone proteins

medRxiv(2025)10.1101/2025.01.22.25320997

N/A

0DataRank · unranked

0 citations

Miguel Minaya, M.F. Broder, Isabel Alfradique‐Dunham, Michelle Moritz, Reshma Bhagat +8 more

A novel lncRNA FAM151B-DT regulates degradation of aggregation prone proteins

Molecular Psychiatry(2025)10.1038/s41380-025-03277-6

N/A

0DataRank · unranked

0 citations

Miguel Minaya, M.F. Broder, Isabel Alfradique‐Dunham, Rebecca L. Miller, Dhruva D. Dhavale +11 more

Three-Dimensional reconstruction of the synaptonemal complex from pachytene maize meiocytes using Electron Microscopy tomography

Proceedings, annual meeting, Electron Microscopy Society of America(1993)10.1017/s0424820100146758

N/A

0DataRank · unranked

0 citations

Bethe A. Scalettar, David A. Agard, John W. Sedat, Jennifer C. Fung

A molecular pore spans the double membrane of the coronavirus replication organelle

Science(2020)10.1126/science.abd3629

N/A

0DataRank · unranked

557 citations

Ronald W.A.L. Limpens, Jessika C. Zevenhoven-Dobbe, Ulrike Laugks, Shawn Zheng, Anja W. M. de Jong +7 more

General and robust covalently linked graphene oxide affinity grids for high-resolution cryo-EM

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2009707117

N/A

0DataRank · unranked

125 citations

Yanxin Liu, Zanlin Yu, Sam Li, Shengjie Feng, Yifan Cheng +2 more

The mitochondrial HSP90 paralog TRAP1 forms an OXPHOS-regulated tetramer and is involved in mitochondrial metabolic homeostasis

BMC Biology(2020)10.1186/s12915-020-0740-7

N/A

0DataRank · unranked

90 citations

Li Dai, Yanxin Liu, Jungsoon Lee, Nastaran Mohammadi Ghahhari, Grégory Segala +9 more

A molecular pore spans the double membrane of the coronavirus replication organelle

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.25.171686

N/A

0DataRank · unranked

52 citations

Ronald W.A.L. Limpens, Jessika C. Zevenhoven-Dobbe, Ulrike Laugks, Shawn Zheng, Anja W. M. de Jong +7 more

Cryo-EM structures reveal a multistep mechanism of Hsp90 activation by co-chaperone Aha1

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.30.180695

N/A

0DataRank · unranked

38 citations

Ming Sun, Alexander Myasnikov, Daniel Elnatan, Nicolas Delaeter, Michael Nguyenquang +2 more

GR chaperone cycle mechanism revealed by cryo-EM: reactivation of GR by the GR:Hsp90:p23 client-maturation complex

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.12.294975

N/A

0DataRank · unranked

17 citations

Ray Yu‐Ruei Wang, David A. Agard, Feng Wang

Cryo-EM reveals the dynamic interplay between mitochondrial Hsp90 and SdhB folding intermediates

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.06.327627

N/A

0DataRank · unranked

16 citations

Daniel Elnatan, Ming Sun, Alexander G. Myasnikov, David A. Agard, Yanxin Liu

XMAP215 and γ-tubulin additively promote microtubule nucleation in purified solutions

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.21.109561

N/A

0DataRank · unranked

5 citations

Michelle Moritz, Haein Kim, David A. Agard, Charles L. Asbury, Trisha N. Davis +1 more

Practical considerations for using K3 cameras in CDS mode for high-resolution and high-throughput single particle cryo-EM

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.08.372763

N/A

0DataRank · unranked

4 citations

Caleigh M. Azumaya, Eric Tse, Adam Frost, Daniel R. Southworth, Kliment A. Verba +3 more

Hsp70 chaperone blocks α-synuclein oligomer formation via a novel engagement mechanism

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.15.098699

N/A

0DataRank · unranked

2 citations

Amandine Berthet, Rose Citron, Robert F. Stanley, Jason E. Gestwicki, David A. Agard +2 more

GR chaperone cycle mechanism revealed by cryo-EM: the GR-loading complex

Research Square(2020)10.21203/rs.3.rs-120723/v1

N/A

0DataRank · unranked

0 citations

Ray Wang, Feng Wang, Elaine Kirschke, Alexander Myasnikov, Jill L. Johnson +1 more

GR chaperone cycle mechanism revealed by cryo-EM: the GR-maturation complex

Research Square(2020)10.21203/rs.3.rs-120721/v1

N/A

0DataRank · unranked

0 citations

Feng Wang, Ray Wang, David A. Agard

Structure of Hsp90–Hsp70–Hop–GR reveals the Hsp90 client-loading mechanism

Nature(2021)10.1038/s41586-021-04252-1

N/A

0DataRank · unranked

217 citations

Feng Wang, Elaine Kirschke, Alexander Myasnikov, Jill L. Johnson, David A. Agard +1 more

Structure of Hsp90–p23–GR reveals the Hsp90 client-remodelling mechanism

Nature(2021)10.1038/s41586-021-04236-1

N/A

0DataRank · unranked

158 citations

Ray Yu‐Ruei Wang, Jill L. Johnson, David A. Agard, Feng Wang

Hsp70 chaperone blocks α-synuclein oligomer formation via a novel engagement mechanism

Journal of Biological Chemistry(2021)10.1016/j.jbc.2021.100613

N/A

0DataRank · unranked

69 citations

Amandine Berthet, Y. Rose Citron, Paraskevi L. Tsiolaki, Robert F. Stanley, Jason E. Gestwicki +3 more

CM1-driven assembly and activation of yeast γ-tubulin small complex underlies microtubule nucleation

eLife(2021)10.7554/elife.65168

N/A

0DataRank · unranked

38 citations

Andrew S. Lyon, Alex Zelter, Shruthi Viswanath, Alison M. Maxwell, Michael J. MacCoss +5 more