Peilin Jia

Shanghai Center For Bioinformation Technology

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

5.1Author DataRank

Indexed papers

7in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

TissGDB: tissue-specific gene database in cancer

Nucleic Acids Research(2018)10.1093/nar/gkx850

Top 7%

3.3DataRank

Top 7%135 citations

Aekyung Park, Guangchun Han, Hua Sun, Peilin Jia, Zhongming Zhao +1 more

Papers

Driven by 43 papers — median percentile 80. Top paper: “TissGDB: tissue-specific gene database in cancer”.

TissGDB: tissue-specific gene database in cancer

Nucleic Acids Research(2018)10.1093/nar/gkx850

Top 7%

3.3DataRank

Top 7%135 citations

Aekyung Park, Guangchun Han, Hua Sun, Peilin Jia, Zhongming Zhao +1 more

KinaseMD: kinase mutations and drug response database

Nucleic Acids Research(2020)10.1093/nar/gkaa945

Top 10%

2.1DataRank

Top 10%79 citations

Haodong Xu, Peilin Jia, Zhongming Zhao, Ruifeng Hu

CeDR Atlas: a knowledgebase of cellular drug response

Nucleic Acids Research(2021)10.1093/nar/gkab897

Top 16%

1.3DataRank

Top 16%42 citations

Hongen Kang, Tianyi Xu, Lili Hao, Yiming Bao, Peilin Jia +3 more

CSEA-DB: an omnibus for human complex trait and cell type associations

Nucleic Acids Research(2020)10.1093/nar/gkaa1064

Top 20%

1.0DataRank

Top 20%31 citations

Ruifeng Hu, Astrid M. Manuel, Andi Liu, Peilin Jia, Zhongming Zhao +1 more

Association of CXCR6 with COVID-19 severity: delineating the host genetic factors in transcriptomic regulation

Human Genetics(2021)10.1007/s00439-021-02305-z

N/A

0.601DataRank · unranked

54 citations

Junke Wang, Hyun-Hwan Jeong, Wenhao Chen, Peilin Jia, Zhongming Zhao +1 more

Identifying candidate genes and drug targets for Alzheimer’s disease by an integrative network approach using genetic and brain region-specific proteomic data

Human Molecular Genetics(2022)10.1093/hmg/ddac124

Top 34%

0.585DataRank

Top 34%16 citations

Astrid M. Manuel, Yulin Dai, Brisa S. Fernandes, Nitesh Enduru, Peilin Jia +2 more

DeepVISP: Deep Learning for Virus Site Integration Prediction and Motif Discovery

Advanced Science(2021)10.1002/advs.202004958

N/A

0.457DataRank · unranked

20 citations

Peilin Jia, Zhongming Zhao, Haodong Xu

Dense module searching for gene networks associated with multiple sclerosis

BMC Medical Genomics(2020)10.1186/s12920-020-0674-5

N/A

0.442DataRank · unranked

18 citations

Yulin Dai, Léorah Freeman, Peilin Jia, Zhongming Zhao, Astrid M. Manuel

DeepFace: Deep-learning-based framework to contextualize orofacial-cleft-related variants during human embryonic craniofacial development

Human Genetics and Genomics Advances(2024)10.1016/j.xhgg.2024.100312

N/A

0.360DataRank · unranked

10 citations

Toshiyuki Itai, Guangsheng Pei, Fangfang Yan, Yan Chu, Xiaoqian Jiang +7 more

Retraction Note: Identification of de novo mutations in prenatal neurodevelopment-associated genes in schizophrenia in two Han Chinese patient-sibling family-based cohorts

Translational Psychiatry(2020)10.1038/s41398-020-01116-6

N/A

0.308DataRank · unranked

4 citations

Daizhan Zhou, Yin‐Ying Wang, Peilin Jia, Chunling Wan, Xingwang Li +13 more

Retracted: Identification of de novo mutations in prenatal neurodevelopment-associated genes in schizophrenia in two Han Chinese patient-sibling family-based cohorts

Translational Psychiatry(2020)10.1038/s41398-020-00987-z

N/A

0.269DataRank · unranked

5 citations

Daizhan Zhou, Yin‐Ying Wang, Peilin Jia, Chunling Wan, Xingwang Li +13 more

Investigating gene functions and single-cell expression profiles of de novo variants in orofacial clefts

Human Genetics and Genomics Advances(2024)10.1016/j.xhgg.2024.100313

N/A

0.208DataRank · unranked

3 citations

Fangfang Yan, Andi Liu, Yulin Dai, Chihiro Iwaya, Sarah W. Curtis +7 more

WebCMap: an R package for high-throughput connectivity analysis within the CMap framework

Bioinformatics Advances(2024)10.1093/bioadv/vbaf278

Top 70%

0.165DataRank

Top 70%2 citations

Yin-Ying Wang, Peilin Jia, Hongen Kang

De novo mutations disturb early brain development more frequently than common variants in schizophrenia

American Journal of Medical Genetics Part B Neuropsychiatric Genetics(2023)10.1002/ajmg.b.32932

Top 72%

0.119DataRank

Top 72%1 citations

Peilin Jia, Yulin Dai, Jingchun Chen, Xiangning Chen, Zhongming Zhao +1 more

Convergent genomic and pharmacological evidence of PI3K/GSK3 signaling alterations in neurons from schizophrenia patients

Neuropsychopharmacology(2020)10.1038/s41386-020-00924-0

N/A

0DataRank · unranked

37 citations

Jessica Di Re, Guangsheng Pei, Gabriel R. Fries, Emily Méndez, Shenglan Li +10 more

Characterization of genome-wide association study data reveals spatiotemporal heterogeneity of mental disorders

BMC Medical Genomics(2020)10.1186/s12920-020-00832-8

N/A

0DataRank · unranked

11 citations

Timothy O’Brien, Guangsheng Pei, Zhongming Zhao, Peilin Jia, Yulin Dai

Gene expression imputation and cell-type deconvolution in human brain with spatiotemporal precision and its implications for brain-related disorders

Genome Research(2020)10.1101/gr.265769.120

N/A

0DataRank · unranked

20 citations

Yin‐Ying Wang, Lukas M. Simon, Yulin Dai, Zhongming Zhao, Peilin Jia +1 more

Molecular signatures identified by integrating gene expression and methylation in non-seminoma and seminoma of testicular germ cell tumours

Epigenetics(2020)10.1080/15592294.2020.1790108

N/A

0DataRank · unranked

17 citations

Guimin Qin, Peilin Jia, Zhongming Zhao, Saurav Mallik

Deep generative neural network for accurate drug response imputation

Nature Communications(2021)10.1038/s41467-021-21997-5

N/A

0DataRank · unranked

91 citations

Ruifeng Hu, Guangsheng Pei, Yulin Dai, Yin‐Ying Wang, Zhongming Zhao +1 more

An integrative, genomic, transcriptomic and network-assisted study to identify genes associated with human cleft lip with or without cleft palate

BMC Medical Genomics(2020)10.1186/s12920-020-0675-4

N/A

0DataRank · unranked

22 citations

Yulin Dai, Junichi Iwata, Zhongming Zhao, Peilin Jia, Fangfang Yan

Cell-type deconvolution analysis identifies cancer-associated myofibroblast component as a poor prognostic factor in multiple cancer types

Oncogene(2021)10.1038/s41388-021-01870-x

N/A

0DataRank · unranked

52 citations

Guangsheng Pei, Jun Yao, Qingqing Ding, Peilin Jia, Zhongming Zhao +1 more

Genome-Wide Correlation of DNA Methylation and Gene Expression in Postmortem Brain Tissues of Opioid Use Disorder Patients

The International Journal of Neuropsychopharmacology(2021)10.1093/ijnp/pyab043

N/A

0DataRank · unranked

40 citations

Yulin Dai, Emily Méndez, Ruifeng Hu, Gabriel R. Fries, Katherine Najera +7 more

DeepFun: a deep learning sequence-based model to decipher non-coding variant effect in a tissue- and cell type-specific manner

Nucleic Acids Research(2021)10.1093/nar/gkab429

N/A

0DataRank · unranked

29 citations

Ruifeng Hu, Peilin Jia, Zhongming Zhao, Guangsheng Pei

A developmental stage specific network approach for studying dynamic transcription factor-microRNA co-regulation during craniofacial development

Development(2020)10.1242/dev.192948

N/A

0DataRank · unranked

19 citations

Peilin Jia, Hiroki Yoshioka, Akiko Suzuki, Junichi Iwata, Zhongming Zhao +1 more

CleftGeneDB: a resource for annotating genes associated with cleft lip and cleft palate

Science Bulletin(2021)10.1016/j.scib.2021.07.008

N/A

0DataRank · unranked

17 citations

Fangfang Yan, Ruifeng Hu, Akiko Suzuki, Chihiro Iwaya, Peilin Jia +3 more

Distinct effect of prenatal and postnatal brain expression across 20 brain disorders and anthropometric social traits: a systematic study of spatiotemporal modularity

Briefings in Bioinformatics(2021)10.1093/bib/bbab214

N/A

0DataRank · unranked

14 citations

Astrid M. Manuel, Brisa S. Fernandes, Yulin Dai, Zhongming Zhao, Peilin Jia

Rewired Pathways and Disrupted Pathway Crosstalk in Schizophrenia Transcriptomes by Multiple Differential Coexpression Methods

Genes(2021)10.3390/genes12050665

N/A

0DataRank · unranked

8 citations

Yan Guo, Jingchun Chen, Xiangning Chen, Peilin Jia, Zhongming Zhao +1 more

Cell-Type-Specific Profibrotic Scores across Multi-Organ Systems Predict Cancer Prognosis

Cancers(2021)10.3390/cancers13236024

N/A

0DataRank · unranked

3 citations

Peilin Jia, Zhongming Zhao, Huihui Fan

deCS : A Tool for Systematic Cell Type Annotations of Single-cell RNA Sequencing Data among Human Tissues

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.19.460993

N/A

0DataRank · unranked

6 citations

Fangfang Yan, Lukas M. Simon, Yulin Dai, Peilin Jia, Zhongming Zhao +1 more

WebCSEA: web-based cell-type-specific enrichment analysis of genes

Nucleic Acids Research(2022)10.1093/nar/gkac392

N/A

0DataRank · unranked

151 citations

Ruifeng Hu, Andi Liu, Kyung Serk Cho, Astrid M. Manuel, Xiaoyang Li +4 more

Charting the proteome landscape in major psychiatric disorders: From biomarkers to biological pathways towards drug discovery

European Neuropsychopharmacology(2022)10.1016/j.euroneuro.2022.06.001

N/A

0DataRank · unranked

49 citations

Yulin Dai, Peilin Jia, Zhongming Zhao, Brisa S. Fernandes

scGWAS: landscape of trait-cell type associations by integrating single-cell transcriptomics-wide and genome-wide association studies

Genome biology(2022)10.1186/s13059-022-02785-w

N/A

0DataRank · unranked

33 citations

Ruifeng Hu, Fangfang Yan, Yulin Dai, Zhongming Zhao, Peilin Jia

deCS : A Tool for Systematic Cell Type Annotations of Single-Cell RNA Sequencing Data Among Human Tissues

Genomics Proteomics & Bioinformatics(2022)10.1016/j.gpb.2022.04.001

N/A

0DataRank · unranked

24 citations

Fangfang Yan, Lukas M. Simon, Yulin Dai, Peilin Jia, Zhongming Zhao +1 more

A gene regulatory network approach harmonizes genetic and epigenetic signals and reveals repurposable drug candidates for multiple sclerosis

Human Molecular Genetics(2022)10.1093/hmg/ddac265

N/A

0DataRank · unranked

19 citations

Yulin Dai, Peilin Jia, Léorah Freeman, Zhongming Zhao, Astrid M. Manuel

Predicting regulatory variants using a dense epigenomic mapped CNN model elucidated the molecular basis of trait-tissue associations

Nucleic Acids Research(2020)10.1093/nar/gkaa1137

N/A

0DataRank · unranked

23 citations

Ruifeng Hu, Yulin Dai, Astrid M. Manuel, Zhongming Zhao, Peilin Jia +1 more

A Method for Bridging Population-Specific Genotypes to Detect Gene Modules Associated with Alzheimer’s Disease

Cells(2022)10.3390/cells11142219

N/A

0DataRank · unranked

6 citations

Peilin Jia, Zhongming Zhao, Assaf Gottlieb, Yulin Dai

Rewired m6A epitranscriptomic networks link mutant p53 to neoplastic transformation

Nature Communications(2023)10.1038/s41467-023-37398-9

N/A

0DataRank · unranked

20 citations

Mo Liu, Mo-Fan Huang, Yang Zhang, Ruifeng Hu, Julian A. Gingold +28 more

6mA-Finder: a novel online tool for predicting DNA N6-methyladenine sites in genomes

Bioinformatics(2020)10.1093/bioinformatics/btaa113

N/A

0DataRank · unranked

55 citations

Ruifeng Hu, Peilin Jia, Zhongming Zhao, Haodong Xu

Differential Expression of Viral Transcripts From Single-Cell RNA Sequencing of Moderate and Severe COVID-19 Patients and Its Implications for Case Severity

Frontiers in Microbiology(2020)10.3389/fmicb.2020.603509

N/A

0DataRank · unranked

43 citations

Peilin Jia, Bingliang Fang, Zhongming Zhao, Teng Liu

T cell exhaustion is associated with antigen abundance and promotes transplant acceptance

American Journal of Transplantation(2020)10.1111/ajt.15870

N/A

0DataRank · unranked

52 citations

Yulin Dai, Xiaolong Zhang, Guohua Wang, Xiang Xiao, Peilin Jia +4 more

A Genome-wide Association Study Discovers 46 Loci of the Human Metabolome in the Hispanic Community Health Study/Study of Latinos

UNC Libraries(2024)10.17615/0ety-ss26

N/A

0DataRank · unranked

0 citations

Alanna C. Morrison, E. Boerwinkle, Megan L. Grove, Q. Qi, Hu Chen +9 more

Deep4mC: systematic assessment and computational prediction for DNA N4-methylcytosine sites by deep learning

Briefings in Bioinformatics(2020)10.1093/bib/bbaa099

N/A

0DataRank · unranked

86 citations

Peilin Jia, Zhongming Zhao, Haodong Xu

MicroRNA and transcription factor co-regulatory networks and subtype classification of seminoma and non-seminoma in testicular germ cell tumors

Scientific Reports(2020)10.1038/s41598-020-57834-w

N/A

0DataRank · unranked

102 citations

Saurav Mallik, Ramkrishna Mitra, Aimin Li, Peilin Jia, Christine M. Eischen +2 more

Peilin Jia

Indexed papers

Top data-sharing exemplar

Papers