Zena Lapp

Biochemistry, Genetics and Molecular BiologyMedicineImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 22 papers. Top paper: “prewas: data pre-processing for more informative bacterial GWAS”.

prewas: data pre-processing for more informative bacterial GWAS

Microbial Genomics(2020)10.1099/mgen.0.000368

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0DataRank · unranked

28 citations

Zena Lapp, Stephanie N. Thiede, Ali Pirani, Evan S. Snitkin, Katie Saund

Application of Combined Genomic and Transfer Analyses to Identify Factors Mediating Regional Spread of Antibiotic-resistant Bacterial Lineages

Clinical Infectious Diseases(2020)10.1093/cid/ciaa364

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0DataRank · unranked

12 citations

Betsy Foxman, Ali Pirani, Zena Lapp, Lona Mody, Evan S. Snitkin +1 more

Machine learning models to identify patient and microbial genetic factors associated with carbapenem-resistant Klebsiella pneumoniae infection

medRxiv(2020)10.1101/2020.07.06.20147306

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0DataRank · unranked

1 citations

Jennifer Han, Jenna Wiens, Ellie J. C. Goldstein, Ebbing Lautenbach, Evan S. Snitkin +1 more

Regional Spread of bla NDM-1-Containing Klebsiella pneumoniae ST147 in Post-Acute Care Facilities

Clinical Infectious Diseases(2021)10.1093/cid/ciab457

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0DataRank · unranked

68 citations

Ryan Crawford, Arianna Miles-Jay, Ali Pirani, William E. Trick, Robert A. Weinstein +4 more

Patient and Microbial Genomic Factors Associated with Carbapenem-Resistant Klebsiella pneumoniae Extraintestinal Colonization and Infection

mSystems(2021)10.1128/msystems.00177-21

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0DataRank · unranked

37 citations

Jennifer Han, Jenna Wiens, Ellie J. C. Goldstein, Ebbing Lautenbach, Evan S. Snitkin +1 more

Teaching Python for Data Science: Collaborative development of a modular interactive curriculum

Journal of Open Source Education(2021)10.21105/jose.00138

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0DataRank · unranked

10 citations

Kelly L. Sovacool, Negar Farzaneh, Vy Kim Nguyen, Sarah E. Haynes, Hayley Falk +13 more

Fitness barriers to spread of colistin resistance overcome by first establishing niche in patients with enhanced colistin exposure

medRxiv(2021)10.1101/2021.06.11.21258758

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0DataRank · unranked

8 citations

Jennifer Han, Divya Choudhary, Stuart Castaneda, Ali Pirani, Kevin Alby +5 more

regentrans: a framework and R package for using genomics to study regional pathogen transmission

medRxiv(2021)10.1101/2021.07.25.21261097

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0DataRank · unranked

4 citations

Zena Lapp, Joyce Wang, Evan S. Snitkin, Sophie Hoffman

Regional spread of bla NDM-1 -containing Klebsiella pneumoniae Sequence Type 147 in post-acute care facilities

medRxiv(2021)10.1101/2021.03.16.21253722

N/A

0DataRank · unranked

1 citations

Ryan Crawford, Arianna Miles-Jay, Ali Pirani, William E. Trick, Robert A. Weinstein +4 more

Teaching Python for Data Science: Collaborative development of a modular & interactive curriculum

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.17.448726

N/A

0DataRank · unranked

0 citations

Kelly L. Sovacool, Negar Farzaneh, Vy Kim Nguyen, Sarah E. Haynes, Hayley Falk +13 more

regentrans: a framework and R package for using genomics to study regional pathogen transmission

Microbial Genomics(2022)10.1099/mgen.0.000747

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0DataRank · unranked

7 citations

Zena Lapp, Joyce Wang, Evan S. Snitkin, Sophie Hoffman

Developing and deploying an integrated workshop curriculum teaching computational skills for reproducible research

Journal of Open Source Education(2022)10.21105/jose.00144

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0DataRank · unranked

4 citations

Kelly L. Sovacool, Nick Lesniak, Dana King, Catherine Barnier, Matthew Flickinger +11 more

Distinct Origins and Transmission Pathways of bla KPC Enterobacterales across Three U.S. States

Journal of Clinical Microbiology(2023)10.1128/jcm.00259-23

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0DataRank · unranked

5 citations

Rany Octaria, Sean M. O’Malley, Tu N. Nguyen, Hannah Wolford, Ryan Crawford +22 more

Analytic optimization of Plasmodium falciparum marker gene haplotype recovery from amplicon deep sequencing of complex mixtures

medRxiv(2023)10.1101/2023.08.17.23294237

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0DataRank · unranked

2 citations

Elizabeth Freedman, Kathie Huang, Christine F. Markwalter, Andrew Obala, Wendy Prudhomme-O’Meara +2 more

Plasmodium falciparum infection in humans and mosquitoes influence natural Anopheline biting behavior and transmission

Nature Communications(2024)10.1038/s41467-024-49080-9

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0DataRank · unranked

26 citations

Zena Lapp, Lucy Abel, Emmah Kimachas, Evans Omollo, Elizabeth Freedman +10 more

Identification of 2 Novel Subtypes of Hepatitis C Virus Genotype 8 and a Potential New Genotype Successfully Treated With Direct Acting Antivirals

The Journal of Infectious Diseases(2024)10.1093/infdis/jiae253

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0DataRank · unranked

16 citations

Zena Lapp, David Bibby, Laura Phillips, Carmen F. Manso, Simon Packer +7 more

Hypermut 3: identifying specific mutational patterns in a defined nucleotide context that allows multistate characters

Bioinformatics Advances(2024)10.1093/bioadv/vbaf025

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0DataRank · unranked

6 citations

Hyejin Yoon, Brian Foley, Thomas Leitner, Zena Lapp

Analytic optimization of Plasmodium falciparum marker gene haplotype recovery from amplicon deep sequencing of complex mixtures

PLOS Global Public Health(2024)10.1371/journal.pgph.0002361

N/A

0DataRank · unranked

4 citations

Elizabeth Freedman, Kathie Huang, Christine F. Markwalter, Andrew Obala, Wendy Prudhomme-O’Meara +2 more

Relationship between malaria vector survival, infectivity, and insecticide-treated net use in western Kenya

Parasites & Vectors(2024)10.1186/s13071-024-06550-9

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0DataRank · unranked

2 citations

Emma Kimachas, Evans Omollo, Erick Nalianya, Tabitha Chepkwony, Joseph Kipkoech +11 more

Hypermut 3: Identifying specific mutational patterns in a defined nucleotide context that allows multistate characters

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.24.620069

N/A

0DataRank · unranked

1 citations

Hyejin Yoon, Brian Foley, Thomas Leitner, Zena Lapp

Relationship between malaria vector survival, infectivity and insecticide treated net use in western Kenya

Research Square(2024)10.21203/rs.3.rs-4090984/v1

N/A

0DataRank · unranked

0 citations

Emma Kimachas, Evans Omollo, Erick Nalianya, Tabitha Chepkwony, Joseph Kipkoech +11 more

wavess: An R package for simulation of adaptive within-host virus sequence evolution

PLoS Computational Biology(2025)10.1371/journal.pcbi.1013437

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0DataRank · unranked

1 citations

Zena Lapp, Fernando D. K. Tria, Ethan Romero-Severson, Carmen Molina-Parı́s, Thomas Leitner +1 more