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prewas: data pre-processing for more informative bacterial GWAS

Microbial Genomics(2020)10.1099/mgen.0.000368Source: DataRank Database

prewas: data pre-processing for more informative bacterial GWAS is a research paper published in Microbial Genomics (2020). On theSindex it has a DataRank of 0. It has been cited 28 times.

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Enrichment:Funding (10 grants)Impact (FWCI 0.90)OA: goldTopics (54)Linked Datasets (18)DataCite Reuse (18)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

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Context only (not used in score)

Findable (2/2)

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Accessible (1/2)

Open Access

Interoperable (2/2)

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Reusable (0/3)

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Authors (5)

Zena Lapp ORCID,Stephanie N. Thiede ORCID,Ali Pirani ORCID,Evan S. Snitkin ORCID,Katie Saund ORCID

Live enrichment

PubMed:32310745 PMC:PMC7371116 OpenAlex:https://openalex.org/W3016356967

National Science Foundation

Grant: DGE 1256260

National Institutes of Health

Grant: T32 AI007528

National Institutes of Health

Grant: 1U01Al124255

National Institutes of Health

Grant: T32GM007544

NHGRI NIH HHS

Grant: T32 HG000040

NIAID NIH HHS

Grant: U01 AI124255

National Institutes of Health

Grant: 1U01AI124255-01

Systems biology of Clostridium difficile infection

National Science Foundation

Grant: 1256260

Graduate Research Fellowship Program (GRFP)

National Institutes of Health

Grant: 5T32GM007544-32

Michigan Predoctoral Training Program in Genetics

National Institutes of Health

Grant: 5T32AI007528-07

Molecular Mechanisms of Microbial Pathogenesis Training

FWCI

0.90

Citation Percentile

0.7%

Citation Trend

2020

2021

2022

2023

2024

2025

goldLicense: cc-by

journalhttps://doi.org/10.1099/mgen.0.000368

publisherhttps://doi.org/10.1099/mgen.0.000368

publisherhttps://www.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.000368?crawler=true&mimetype=application/pdf

repositoryhttps://pubmed.ncbi.nlm.nih.gov/32310745

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/7371116

Fields of Study

Genomics and Phylogenetic StudiesGut microbiota and healthMycobacterium research and diagnosis0301 basic medicine0303 health sciences03 medical and health sciencesBacteriaComputational BiologyDatabases, GeneticDrug Resistance, BacterialEvolution, MolecularGenetic Association StudiesGenome, BacterialHumansPolymorphism, Single NucleotideSoftware

MeSH Terms

BacteriaHumansSoftwareGenome, BacterialEvolution, MolecularComputational BiologyPolymorphism, Single NucleotideDrug Resistance, BacterialDatabases, GeneticGenetic Association Studies

Keywords

InterpretabilityIdentification (biology)Genome-wide association studyComputational biologyGenetic architectureGenetic associationComputer scienceGeneticsBiologyGeneQuantitative trait locusArtificial intelligenceSingle-nucleotide polymorphismSoftwareGwasOverlapping GenesData Pre-processingMultiallelic LociReference AlleleBacteriaMethodPolymorphism, Single NucleotideEvolution, MolecularDatabases, GeneticDrug Resistance, BacterialHumansGenetic Association StudiesGenome, Bacterial

Sustainable Development Goals

SDG 2: 2. Zero hunger

Additional file 2 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631517.v1figshare

Additional file 2 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631517figshare

Additional file 3 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631520.v1figshare

Additional file 3 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631520figshare

Additional file 4 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631523.v1figshare

Additional file 4 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631523figshare

Additional file 5 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631526.v1figshare

Additional file 5 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631526figshare

Additional file 6 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631529.v1figshare

Additional file 6 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631529figshare

Additional file 7 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631532.v1figshare

Additional file 7 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631532figshare

Additional file 8 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631535.v1figshare

Additional file 8 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631535figshare

Additional file 9 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631538.v1figshare

Additional file 9 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631538figshare

Additional file 1 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631514.v1figshare

Additional file 1 of Global-scale GWAS associates a subset of SNPs with animal-adapted variants in M. tuberculosis complex

10.6084/m9.figshare.26631514figshare

prewas: data pre-processing for more informative bacterial GWAS

FAIR Checklist

Authors (5)

Funding (10 grants)

Impact

Open Access

Topics

Linked Datasets (18)

Annotations (Europe PMC)