Meta-analysis of the brain transcriptomes of multiple genetic mouse models of schizophrenia highlights dysregulation in striatum and thalamus is a dataset published in Translational Psychiatry (2025). On theSindex it has a DataRank of 0.218, placing it in the top 62.8% of the data-sharing corpus. It has been cited 3 times, with 3 citing works in its 1-hop citation network. Its calibrated FAIR score is 67/100.
Ranks in the top 63% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“Data for Dagla mutants and substantia nigra data from Grin2a and Grin2b mutants has been uploaded to GEO at accession number GSE299704.”
The paper provides a GEO accession (GSE299704), which is a persistent identifier scheme listed in the accepted set.
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“GEO”
The paper names GEO as the repository where the data are deposited, which is a recognized data repository in the list.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“Data for Dagla mutants and substantia nigra data from Grin2a and Grin2b mutants has been uploaded to GEO at accession number GSE299704.”
The dataset identifier (GSE299704) appears only in the body text (Data Availability section), not in the reference list.
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“Data for Dagla mutants and substantia nigra data from Grin2a and Grin2b mutants has been uploaded to GEO at accession number GSE299704. Extended results data are available upon request.”
The statement points to a repository record (GEO with accession GSE299704), which corresponds to Colavizza category 3.
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“Data for Dagla mutants and substantia nigra data from Grin2a and Grin2b mutants has been uploaded to GEO at accession number GSE299704.”
The dataset's content is described in a single sentence in the Data Availability section, but there is no itemized inventory, table, or section heading for the data description. [majority verdict 'partial' (4/5 passes agreed)]
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“Data for Dagla mutants and substantia nigra data from Grin2a and Grin2b mutants has been uploaded to GEO at accession number GSE299704.”
The data are deposited in a public repository (GEO) with no stated precondition, making them unconditionally accessible.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“Data for Dagla mutants and substantia nigra data from Grin2a and Grin2b mutants has been uploaded to GEO at accession number GSE299704.”
The paper describes the action of uploading to GEO, from which open access can be inferred, but does not explicitly label the access level.
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are from mice, not human subjects, and no gatekeeper is named, so the criterion is not applicable; no gatekeeper of any kind is mentioned.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
The paper states that the data have been uploaded to GEO but does not mention any retention period, persistence commitment, or availability timing. [majority verdict 'no' (3/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format for the released data is explicitly named. [majority verdict 'no' (3/5 passes agreed)]
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
“GO”— not found in the paper; verdict downgraded
The paper uses Gene Ontology (GO) for gene set enrichment analysis, which is a community standard vocabulary registered in FAIRsharing. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (4/5 passes agreed)]
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
No identifier for external resources other than the paper's own dataset is given. [majority verdict 'no' (4/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
The paper includes a Creative Commons Attribution 4.0 license for the article, but no license is explicitly stated for the data deposited in GEO.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
The paper does not provide a version token or a date for the data; the GEO accession is a unique identifier but not a version indicator.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
“https://github.com/StanleyCenter-ShengLab/PerzelMandell_etal_2024”
The paper provides a GitHub repository URL for the code, which is a machine-resolvable locator.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“T32DA007027, P30DA033934, and R01DA043571”
The paper lists specific NIH grant numbers associated with the funding. [majority verdict 'yes' (4/5 passes agreed)]
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“NovaSeq 6000 S2 (Illumina)”
The paper names the specific sequencing platform (NovaSeq 6000 S2) and software (e.g., STAR version 2.7.10a) used to produce the data. [majority verdict 'yes' (4/5 passes agreed)]
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
No documentation object (README, data dictionary, codebook) is named as accompanying the data; variable definitions are not provided in the article either. [majority verdict 'no' (3/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.208
From this paper's citation signal
Citation Network Contribution
0.0105
From 1 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 3 citers.
NIGMS NIH HHS
Grant: T32 GM144273
National Institutes of Health
Grant: 5P30DA033934-09
The Central Virginia Center on Drug Abuse Research
National Institutes of Health
Grant: 5T32DA007027-14
TRAINING IN THE PHARMACOLOGY OF ABUSED DRUGS
National Institutes of Health
Grant: 5R01DA043571-05
Endocannabinoid Biosynthesis in Inflammation and Pain
Broad Institute | Stanley Center for Psychiatric Research, Broad Institute
FWCI
1.23
Citation Percentile
0.8%
Citation Trend
Fields of Study
MeSH Terms
Keywords