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Generalized correlation-based dynamical network analysis: a new high-performance approach for identifying allosteric communications in molecular dynamics trajectories

The Journal of Chemical Physics(2020)10.1063/5.0018980Source: DataRank Database

Generalized correlation-based dynamical network analysis: a new high-performance approach for identifying allosteric communications in molecular dynamics trajectories is a research paper published in The Journal of Chemical Physics (2020). On theSindex it has a DataRank of 0. It has been cited 169 times.

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169 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (4 grants)Impact (FWCI 10.39)OA: closedTopics (25)IDs (PubMed, OpenAlex)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (0/2)

Interoperable (0/2)

Reusable (0/3)

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Authors (4)

Rafael C. Bernardi ORCID,César de la Fuente‐Núñez ORCID,Zaida Luthey‐Schulten ORCID,Marcelo C. R. Melo ORCID

Live enrichment

PubMed:33032427 OpenAlex:https://openalex.org/W3089969599

National Science Foundation

Grant: MCB-1616590

National Science Foundation

Grant: OCI-0725070

National Science Foundation

Grant: ACI-1238993

National Institutes of Health

Grant: P41-GM104601

FWCI

10.39

Citation Percentile

1.0%

Citation Trend

2020

2021

2022

2023

2024

2025

2026

closedLicense: https://publishing.aip.org/authors/rights-and-permissions

publisherhttp://aip.scitation.org/doi/am-pdf/10.1063/5.0018980

publisherhttps://pubs.aip.org/aip/jcp/article-pdf/doi/10.1063/5.0018980/15580147/134104_1_online.pdf

journalhttps://doi.org/10.1063/5.0018980

repositoryhttps://pubmed.ncbi.nlm.nih.gov/33032427

Fields of Study

Computational Drug Discovery MethodsMicrobial Metabolic Engineering and BioproductionProtein Structure and Dynamics

MeSH Terms

Protein DomainsAllosteric RegulationEscherichia coliLeucine-tRNA LigaseOrotidine-5'-Phosphate DecarboxylaseSoftwareThermus thermophilusMethanobacteriaceaeCatalytic DomainElectron Transport Complex IMolecular Dynamics Simulation

Keywords

Computer scienceMolecular dynamicsAllosteric regulationVirtual screeningBiological systemDistributed computingComputational biologyChemistryComputational chemistryBiologyEnzyme

Sustainable Development Goals

SDG 0: Good health and well-being