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TT3D: Leveraging precomputed protein 3D sequence models to predict protein–protein interactions

Bioinformatics(2023)10.1093/bioinformatics/btad663Source: DataRank Database

TT3D: Leveraging precomputed protein 3D sequence models to predict protein–protein interactions is a research paper published in Bioinformatics (2023). On theSindex it has a DataRank of 0. It has been cited 32 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access32 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (3 grants)Impact (FWCI 4.31)OA: goldTopics (22)IDs (PubMed, PMC, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (5)

Kapil Devkota ORCID,Rohit Singh ORCID,Lenore Cowen ORCID,Bonnie Berger ORCID,Samuel Sledzieski ORCID

Live enrichment

PubMed:37897686 PMC:PMC10640393 OpenAlex:https://openalex.org/W4388007030

National Science Foundation Graduate Research Fellowship

Grant: 2141064

National Science Foundation

Grant: CCF-1934553

National Institutes of Health

Grant: R35GM141861

FWCI

4.31

Citation Percentile

0.9%

Citation Trend

2023

2024

2025

2026

goldLicense: cc-by

journalhttps://academic.oup.com/bioinformatics/article-pdf/39/11/btad663/53287116/btad663.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/39/11/btad663/53287116/btad663.pdf

publisherhttps://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad663/52662312/btad663.pdf

journalhttps://doi.org/10.1093/bioinformatics/btad663

repositoryhttps://pubmed.ncbi.nlm.nih.gov/37897686

Fields of Study

Protein Structure and DynamicsBioinformatics and Genomic NetworksMachine Learning in BioinformaticsAmino Acid SequenceSoftwareProteins

MeSH Terms

Amino Acid SequenceProteinsSoftware

Keywords

Computer scienceUniProtString (physics)Protein sequencingLeverage (statistics)Sequence (biology)Protein structure predictionProtein structurePeptide sequenceArtificial intelligenceBiologyMathematicsGenetics