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Compromised two-start zigzag chromatin folding in immature mouse retina cells driven by irregularly spaced nucleosomes with short DNA linkers

Nucleic Acids Research(2025)10.1093/nar/gkaf457Source: DataRank Database

Compromised two-start zigzag chromatin folding in immature mouse retina cells driven by irregularly spaced nucleosomes with short DNA linkers is a research paper published in Nucleic Acids Research (2025). On theSindex it has a DataRank of 0. It has been cited 5 times.

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Compromised 2-start zigzag chromatin folding in immature mouse retina cells driven by irregularly spaced nucleosomes with short DNA linkers · Dryad

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Enrichment:Funding (16 grants)OA: goldTopics (39)Linked Datasets (1)DataCite Reuse (1)IDs (PubMed)

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Authors (8)

Stephanie Portillo‐Ledesma ORCID,Evgenya Y. Popova ORCID,Nathan Jentink ORCID,Matthew T. Swulius ORCID,Zilong Li ORCID

Live enrichment

PubMed:40464692

National Science Foundation

Grant: 1911940

The four dimensions of nucleosome chain folding

National Science Foundation

Grant: 2151777

Collaborative Research: Unraveling Structural and Mechanistic Aspects of RNA Viral Frameshifting Elements by Graph Theory and Molecular Modeling

National Science Foundation

Grant: 2330628

MFB: RNA modifications of frameshifting stimulators: cellular platforms to engineer gene expression by computational mutation predictions and functional experiments

National Science Foundation

Grant: 2337391

Collaborative Research: Data-driven spatial genomics modeling of X-chromosome inactivation at multiple scales

National Institutes of Health

Grant: R21 DA056343

National Institutes of Health

Grant: R35-GM12256

National Institutes of Health

Grant: 2

National Institutes of Health

Grant: 5R01DA012256-04

RESTRUCTURING SERVICES FOR DRUG ABUSING TANF WOMEN

National Institutes of Health

Grant: 5R21DA056343-02

Nanoscale cryo-electron tomographic analysis of nucleosome condensates in neuronal chromatin

National Institutes of Health

Grant: 5R35GM122562-07

Bridging Disparate Structural/Functional Scales: Multiscale Modeling of Genome Organization and of Viral RNA Frameshifting

NIGMS NIH HHS

Grant: R35 GM122562

NYU Simons Center

NYU IT High Performance Computing

Simons Foundation

Computational Physical Chemistry

Philip Morris International

goldLicense: cc-by

publisherhttps://doi.org/10.1093/nar/gkaf457

publisherhttps://academic.oup.com/nar/article-pdf/53/10/gkaf457/63434896/gkaf457.pdf

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/12135184

https://pubmed.ncbi.nlm.nih.gov/40464692

http://dx.doi.org/10.1093/nar/gkaf457

Fields of Study

0301 basic medicine03 medical and health sciencesAnimalsNucleosomesMiceRetinaDNAChromatinCryoelectron MicroscopyChromatin Assembly and DisassemblyHeterochromatinRetinal Rod Photoreceptor CellsModels, MolecularMice, Inbred C57BL

MeSH Terms

AnimalsNucleosomesMiceRetinaDNAChromatinCryoelectron MicroscopyChromatin Assembly and DisassemblyHeterochromatinRetinal Rod Photoreceptor CellsModels, MolecularMice, Inbred C57BL

Keywords

Models, MolecularGene regulation, Chromatin and EpigeneticsCryoelectron MicroscopyDNAChromatin Assembly and DisassemblyRetinaChromatinNucleosomesMice, Inbred C57BLMiceRetinal Rod Photoreceptor CellsHeterochromatinAnimals

Compromised 2-start zigzag chromatin folding in immature mouse retina cells driven by irregularly spaced nucleosomes with short DNA linkers

10.5061/dryad.bcc2fqzpzDryad