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Acceleration of FM-index Queries Through Prefix-free Parsing.

(2023)10.4230/lipics.wabi.2023.13Source: DataRank Database

Acceleration of FM-index Queries Through Prefix-free Parsing. is a research paper (2023). On theSindex it has a DataRank of 0.

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U-Index: A Universal Indexing Framework for Matching Long Patterns · Schloss Dagstuhl – Leibniz-Zentrum für Informatik
LIPIcs, Volume 273, WABI 2023, Complete Volume · Schloss Dagstuhl – Leibniz-Zentrum für Informatik

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (1 grants)Impact (FWCI 0.00)OA: greenTopics (19)Linked Datasets (2)DataCite Reuse (2)IDs (PubMed, PMC, OpenAlex)

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Context only (not used in score)

Findable (2/2)

Has DOI
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Accessible (1/2)

Open Access

Interoperable (2/2)

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Authors (6)

Marco Antônio Oliva ORCID,Dominik Köppl ORCID,Hideo Bannai ORCID,Christina Boucher ORCID,Travis Gagie ORCID

Live enrichment

PubMed:41179999 PMC:PMC12576618 OpenAlex:https://openalex.org/W4415854860

NHGRI NIH HHS

Grant: R01 HG011392

FWCI

0.00

Citation Percentile

0.3%

greenLicense: cc-by

repositoryhttps://pmc.ncbi.nlm.nih.gov/articles/PMC12576618/pdf/nihms-2112388.pdf

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/12576618

repositoryhttps://pubmed.ncbi.nlm.nih.gov/41179999

Europe_PMChttps://europepmc.org/articles/PMC12576618

Europe_PMChttps://europepmc.org/articles/PMC12576618?pdf=render

Fields of Study

Algorithms and Data CompressionGenome Rearrangement AlgorithmsGenomics and Phylogenetic StudiesTheory of computation → Pattern matching

Keywords

FM-indexpangenomicsscalabilityword-based indexingrandom accessParsingSuffixSpeedupSuffix arrayCode (set theory)Character (mathematics)AccelerationEncoding (memory)Pattern MatchingTheory Of Computation

U-Index: A Universal Indexing Framework for Matching Long Patterns

10.4230/lipics.sea.2025.4Schloss Dagstuhl – Leibniz-Zentrum für Informatik

LIPIcs, Volume 273, WABI 2023, Complete Volume

10.4230/lipics.wabi.2023Schloss Dagstuhl – Leibniz-Zentrum für Informatik