Shamil R. Sunyaev

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

30.4Author DataRank

Indexed papers

6in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Nature(2007)10.1038/nature05874

Top 1%

12.9DataRank

Top 1%5277 citations

J Stamatoyannopoulos, Simon G. Gregory, T Gingeras, Eoghan Harrington, Zhiping Weng +286 more

Papers

Driven by 58 papers — median percentile 95. Top paper: “Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project”.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Nature(2007)10.1038/nature05874

Top 1%

12.9DataRank

Top 1%5277 citations

J Stamatoyannopoulos, Simon G. Gregory, T Gingeras, Eoghan Harrington, Zhiping Weng +286 more

Integrative analysis of 111 reference human epigenomes

Nature(2015)10.1038/nature14248

Top 1%

10.0DataRank

Top 1%7189 citations

Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen +93 more

A cross-disorder dosage sensitivity map of the human genome

Cell(2022)10.1016/j.cell.2022.06.036

Top 5%

4.7DataRank

Top 5%367 citations

Joseph Glessner, Eleonora Porcu, Maarja Lepamets, Rhonda Brandon, Christopher Lauricella +46 more

Widely distributed noncoding purifying selection in the human genome

Proceedings of the National Academy of Sciences(2007)10.1073/pnas.0705140104

N/A

4.5DataRank · unranked

97 citations

William S. Noble, Charles E. Grant, Shamil R. Sunyaev, John A. Stamatoyannopoulos, William Stafford Noble +3 more

The missing link between genetic association and regulatory function

eLife(2022)10.7554/elife.74970

N/A

3.1DataRank · unranked

160 citations

Sumaiya Nazeen, Daniel Lee, Huwenbo Shi, J Stamatoyannopoulos, Sung Chun +4 more

FAVOR: functional annotation of variants online resource and annotator for variation across the human genome

Nucleic Acids Research(2022)10.1093/nar/gkac966

Top 8%

2.7DataRank

Top 8%143 citations

Theodore Arapoglou, Xihao Li, Zilin Li, Xiuwen Zheng, Jill E. Moore +20 more

Evidence for secondary-variant genetic burden and non-random distribution across biological modules in a recessive ciliopathy

Nature Genetics(2020)10.1038/s41588-020-0707-1

N/A

2.0DataRank · unranked

35 citations

Onuralp Söylemez, Aysegül Ozanturk, Niki Mourtzi, Sebastian Akle, Irwin Jungreis +16 more

A cross-disorder dosage sensitivity map of the human genome

medRxiv(2021)10.1101/2021.01.26.21250098

N/A

2.0DataRank · unranked

54 citations

Joseph Glessner, Eleonora Porcu, Lisa‐Marie Niestroj, Jacob C. Ulirsch, Georgios Kellaris +28 more

Embryonic Stem Cell Lines Derived from Human Blastocysts

Science(1998)10.1126/science.282.5391.1145

N/A

1.5DataRank · unranked

15864 citations

Joseph Itskovitz-Eldor, Sander S. Shapiro, Michelle A. Waknitz, Jennifer J. Swiergiel, Vivienne S. Marshall +4 more

Human DNA methylomes at base resolution show widespread epigenomic differences

Nature(2009)10.1038/nature08514

N/A

1.3DataRank · unranked

4754 citations

Mattia Pelizzola, Robert H. Dowen, R. David Hawkins, Gary Hon, Julian Tonti-Filippini +16 more

Histone modifications at human enhancers reflect global cell-type-specific gene expression

Nature(2009)10.1038/nature07829

N/A

1.2DataRank · unranked

2569 citations

Gary C. Hon, R. David Hawkins, Yanxiao Zhang, Alexander Stark, Lindsey F. Harp +18 more

Deciphering the impact of genomic variation on function

Nature(2024)10.1038/s41586-024-07510-0

N/A

1.1DataRank · unranked

89 citations

Jesse M. Engreitz, Heather A. Lawson, Harinder Singh, Lea M. Starita, Gary C. Hon +95 more

Patterns and rates of exonic de novo mutations in autism spectrum disorders

Nature(2012)10.1038/nature11011

N/A

1.1DataRank · unranked

1794 citations

Yan Kou, Li Liu, Avi Ma’ayan, Kaitlin E. Samocha, Aniko Sabo +60 more

The mystery of missing heritability: Genetic interactions create phantom heritability

Proceedings of the National Academy of Sciences(2012)10.1073/pnas.1119675109

N/A

1.1DataRank · unranked

1623 citations

Eliana Hechter, Shamil R. Sunyaev, Eric S. Lander, Or Zuk

Quantifying constraint in the human mitochondrial genome

Nature(2024)10.1038/s41586-024-08048-x

N/A

1.1DataRank · unranked

58 citations

Kaiyue Ma, Wei Liu, Stephanie L. Battle, Kristen M. Laricchia, Grace Tiao +12 more

Gene expression patterns in human embryonic stem cells and human pluripotent germ cell tumors

Proceedings of the National Academy of Sciences(2003)10.1073/pnas.2235735100

N/A

0.971DataRank · unranked

648 citations

Xin Chen, Jonathan S. Draper, Jessica E. Antosiewicz, Chris H. Chon, Sunita B. Jones +5 more

Extremely low-coverage sequencing and imputation increases power for genome-wide association studies

Nature Genetics(2012)10.1038/ng.2283

N/A

0.868DataRank · unranked

326 citations

Nicholas Mancuso, Paul J. McLaren, Kiran Garimella, Noah Zaitlen, Alexandra P. Lewis +23 more

No evidence that selection has been less effective at removing deleterious mutations in Europeans than in Africans

Nature Genetics(2015)10.1038/ng.3186

N/A

0.825DataRank · unranked

244 citations

Daniel Balick, Alexandra P. Lewis, Ankit Malhotra, Shamil R. Sunyaev, David Reich +2 more

The landscape of tolerated genetic variation in humans and primates

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.01.538953

N/A

0.782DataRank · unranked

24 citations

Tobias Hamp, Jeffrey M. Ede, Joshua G. Schraiber, Jeremy F. McRae, Moriel Singer‐Berk +92 more

The landscape of tolerated genetic variation in humans and primates

Science(2023)10.1126/science.abn8197

N/A

0.780DataRank · unranked

180 citations

Tobias Hamp, Jeffrey M. Ede, Joshua G. Schraiber, Jeremy F. McRae, Moriel Singer‐Berk +92 more

Population-specific causal disease effect sizes in functionally important regions impacted by selection

Nature Communications(2021)10.1038/s41467-021-21286-1

N/A

0.741DataRank · unranked

139 citations

Steven Gazal, Masahiro Kanai, Evan M. Koch, Armin Schoech, Katherine M. Siewert +9 more

A mutation rate model at the basepair resolution identifies the mutagenic effect of Polymerase III transcription

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.20.504670

N/A

0.662DataRank · unranked

10 citations

Daniel J. Lee, Evan M. Koch, Joshua S. Lichtman, Harding H. Luan, Shamil R. Sunyaev +1 more

Population sequencing data reveal a compendium of mutational processes in the human germ line

Science(2021)10.1126/science.aba7408

N/A

0.648DataRank · unranked

74 citations

Ruslan Soldatov, Evan M. Koch, Ryan J. McGinty, Jakob M. Goldmann, Ryan D. Hernandez +38 more

A mutation rate model at the basepair resolution identifies the mutagenic effect of polymerase III transcription

Nature Genetics(2023)10.1038/s41588-023-01562-0

N/A

0.604DataRank · unranked

55 citations

Evan M. Koch, Daniel J. Lee, Joshua S. Lichtman, Harding H. Luan, Shamil R. Sunyaev +1 more

Overcoming constraints on the detection of recessive selection in human genes from population frequency data

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.12.001

N/A

0.464DataRank · unranked

21 citations

Daniel M. Jordan, Shamil R. Sunyaev, Ron Do, Daniel J. Balick

Leveraging pleiotropy to discover and interpret GWAS results for sleep-associated traits

PLoS Genetics(2022)10.1371/journal.pgen.1010557

N/A

0.434DataRank · unranked

17 citations

Sebastian Akle, Athanasios Teodosiadis, Brian E. Cade, Heming Wang, Tamar Sofer +13 more

Evidence for secondary-variant genetic burden and non-random distribution across biological modules in a recessive ciliopathy

bioRxiv (Cold Spring Harbor Laboratory)(2018)10.1101/362707

N/A

0.403DataRank · unranked

4 citations

Onuralp Söylemez, Aysegül Ozanturk, Sebastian Akle, Irwin Jungreis, Jean Muller +16 more

StrVCTVRE: A supervised learning method to predict the pathogenicity of human genome structural variants

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.15.097048

N/A

0.360DataRank · unranked

10 citations

Zhiqiang Hu, Shamil R. Sunyaev, Steven E. Brenner, Andrew G. Sharo

Hotspots of human mutation point to clonal expansions in spermatogonia

medRxiv(2025)10.1101/2025.01.03.25319979

N/A

0.343DataRank · unranked

7 citations

Mikhail A. Moldovan, Evan M. Koch, Prathitha Kar, Matthew D. C. Neville, Raheleh Rahbari +2 more

Pervasive correlations between causal disease effects of proximal SNPs vary with functional annotations and implicate stabilizing selection

medRxiv(2023)10.1101/2023.12.04.23299391

N/A

0.294DataRank · unranked

4 citations

Arun Durvasula, Colby Chiang, Evan M. Koch, Benjamin J. Strober, Huwenbo Shi +8 more

Unexpected variability of allelic imbalance estimates from RNA sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.18.948323

N/A

0.241DataRank · unranked

4 citations

S.V. Vinogradova, Saumya Gupta, Andrey A. Mironov, Shamil R. Sunyaev, Alexander A. Gimelbrant +1 more

Enrichment of somatic mutations in schizophrenia brain targets prenatally active transcription factor bindings sites

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.23.481681

N/A

0.241DataRank · unranked

4 citations

Attila Jones, Vladimir B. Seplyarskiy, Chaggai Rosenbluh, Taejong Bae, Yifan Wang +11 more

Missing Regulation Between Genetic Association and Transcriptional Abundance for Hypercholesterolemia Genes

Genes(2025)10.3390/genes16010084

N/A

0.165DataRank · unranked

2 citations

Noah J Connally, Gavin R. Schnitzler, Michael Cho, Z. Gordon Jiang, Shamil R. Sunyaev +2 more

Pervasive correlations between causal disease effects of proximal SNPs vary with functional annotations and implicate stabilizing selection

Research Square(2023)10.21203/rs.3.rs-3707248/v1

N/A

0.165DataRank · unranked

2 citations

Alkes L. Price, Arun Durvasula, Colby Chiang, Evan M. Koch, Armin Schoech +9 more

FAVOR 2.0: A reengineered functional annotation of variants online resource for interpreting genomic variation

Nucleic Acids Research(2025)10.1093/nar/gkaf1217

Top 72%

0.115DataRank

Top 72%1 citations

Vineet Verma, Xihao Li, Zilin Li, Nicole Shedd, Thomas Cheng Li +12 more

Genome-wide gene by sleepiness interaction analysis for sleep apnea

SLEEP(2025)10.1093/sleep/zsaf212

N/A

0.104DataRank · unranked

1 citations

Nuzulul Kurniansyah, Jiwon Lee, Sina A. Gharib, Yushan Xu, Yiyan Zhang +80 more

Exome sequencing and the genetic basis of complex traits

UNC Libraries(2020)10.17615/2gxf-xr79

N/A

0DataRank · unranked

0 citations

Kiran Garimella, Benjamin M. Neale, Adam Kieżun, Shaun Purcell, Nathan O. Stitziel +14 more

Revisiting mutagenesis at non-B DNA motifs in the human genome

Nature Structural & Molecular Biology(2023)10.1038/s41594-023-00936-6

N/A

0DataRank · unranked

23 citations

Shamil R. Sunyaev, Ryan J. McGinty

Recurrent mutation in the ancestry of a rare variant

Genetics(2023)10.1093/genetics/iyad049

N/A

0DataRank · unranked

19 citations

Wai-Tong Louis Fan, Evan M. Koch, Shamil R. Sunyaev, John Wakeley

Non-parametric Polygenic Risk Prediction via Partitioned GWAS Summary Statistics

The American Journal of Human Genetics(2020)10.1016/j.ajhg.2020.05.004

N/A

0DataRank · unranked

48 citations

Maxim Imakaev, Daniel Hui, Nikolaos A. Patsopoulos, Benjamin M. Neale, Sekar Kathiresan +3 more

Identification of cancer driver genes based on nucleotide context

Nature Genetics(2020)10.1038/s41588-019-0572-y

N/A

0DataRank · unranked

276 citations

Donate Weghorn, Amaro Taylor‐Weiner, André Richters, Brendan Reardon, David Liu +4 more

Somatic mosaicism in schizophrenia brains reveals prenatal mutational processes

Science(2024)10.1126/science.adq1456

N/A

0DataRank · unranked

21 citations

Attila Jones, Vladimir B. Seplyarskiy, Thanh Thanh L. Nguyen, Chaggai Rosenbluh, Taejong Bae +18 more

FAVOR-GPT: a generative natural language interface to whole genome variant functional annotations

Bioinformatics Advances(2024)10.1093/bioadv/vbae143

N/A

0DataRank · unranked

9 citations

Hufeng Zhou, Vineet Verma, Xiangru Tang, Yanjun Shao, Eric Van Buren +6 more

Joint, multifaceted genomic analysis enables diagnosis of diverse, ultra-rare monogenic presentations

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.13.580158

N/A

0DataRank · unranked

3 citations

Mikhail A. Moldovan, Rebecca Reimers, Daniel Traviglia, Xinyun Li, Danielle Barnum +14 more

Segregating DNA lesions point to high selective advantage of tumor initiating cells

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.02.680094

N/A

0DataRank · unranked

0 citations

Maha Shady, Maria A Andrianova, Michael Chapman, Eliezer M. Van Allen, Shamil R. Sunyaev +1 more

Learning Patient Similarity from Genomics for Precision Oncology

medRxiv(2025)10.64898/2025.12.17.25342480

N/A

0DataRank · unranked

0 citations

Brendan Reardon, Sharon Jiang, Erica Pimenta, Tess A. O’Meara, Jihye Park +5 more

The missing link between genetic association and regulatory function

medRxiv(2021)10.1101/2021.06.08.21258515

N/A

0DataRank · unranked

19 citations

Sumaiya Nazeen, Daniel Lee, Huwenbo Shi, J Stamatoyannopoulos, Sung Chun +4 more

Extremely low-coverage sequencing and imputation increases power for genome-wide association studies

UNC Libraries(2020)10.17615/haws-ma91

N/A

0DataRank · unranked

0 citations

Nicholas Mancuso, Paul J. McLaren, Kiran Garimella, Noah Zaitlen, Alexandra P. Lewis +19 more

Purifying selection on noncoding deletions of human regulatory loci detected using their cellular pleiotropy

Genome Research(2021)10.1101/gr.275263.121

N/A

0DataRank · unranked

9 citations

Jae Hoon Sul, Daniel J. Balick, Sebastian Akle, Alzheimer's Disease Neuroimaging Initiative, Robert C. Green +2 more

Overcoming constraints on the detection of recessive selection in human genes from population frequency data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.06.443024

N/A

0DataRank · unranked

3 citations

Daniel M. Jordan, Shamil R. Sunyaev, Ron Do, Daniel J. Balick

Maintenance of Complex Trait Variation: Classic Theory and Modern Data

Frontiers in Genetics(2021)10.3389/fgene.2021.763363

N/A

0DataRank · unranked

19 citations

Shamil R. Sunyaev, Evan M. Koch

Replicate sequencing libraries are important for quantification of allelic imbalance

Nature Communications(2021)10.1038/s41467-021-23544-8

N/A

0DataRank · unranked

25 citations

S.V. Vinogradova, Saumya Gupta, Andrey A. Mironov, Shamil R. Sunyaev, Alexander A. Gimelbrant +1 more

StrVCTVRE: A supervised learning method to predict the pathogenicity of human genome structural variants

The American Journal of Human Genetics(2022)10.1016/j.ajhg.2021.12.007

N/A

0DataRank · unranked

73 citations

Zhiqiang Hu, Shamil R. Sunyaev, Steven E. Brenner, Andrew G. Sharo

AnFiSA: An open-source computational platform for the analysis of sequencing data for rare genetic disease

Journal of Biomedical Informatics(2022)10.1016/j.jbi.2022.104174

N/A

0DataRank · unranked

2 citations

D. Etin, S I Trifonov, Viktoria Evdokimova, V. Ulitin, Jun Shen +15 more

Polygenic adaptation of rosette growth in Arabidopsis thaliana

PLoS Genetics(2021)10.1371/journal.pgen.1008748

N/A

0DataRank · unranked

37 citations

Kim A. Steige, Fei He, Evan M. Koch, Sebastián E. Ramos‐Onsins, Hongya Gu +4 more

Quantifying constraint in the human mitochondrial genome

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.16.520778

N/A

0DataRank · unranked

10 citations

Wei Liu, Stephanie L. Battle, Kristen M. Laricchia, Grace Tiao, Daniela Puiu +9 more

Demographic and Viral-Genetic Analyses of COVID-19 Severity in Bahrain Identify Local Risk Factors and a Protective Effect of Polymerase Mutations

medRxiv(2022)10.1101/2022.08.13.22278740

N/A

0DataRank · unranked

1 citations

Justin Du, Michelle Dressner, Hashmeya Erahim Alwasti, Zahra Al Taif, Fatima Shehab +11 more

Recurrent mutation in the ancestry of a rare variant

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.18.504427

N/A

0DataRank · unranked

0 citations

Wai-Tong Louis Fan, Evan M. Koch, Shamil R. Sunyaev, John Wakeley

Shamil R. Sunyaev

Indexed papers

Top data-sharing exemplar

Papers