Brandon J. DeKosky

Also affiliated with Massachusetts Institute of Technology

MedicineImmunology and MicrobiologyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 42 papers. Top paper: “Antibody-dependent enhancement and SARS-CoV-2 vaccines and therapies”.

Antibody-dependent enhancement and SARS-CoV-2 vaccines and therapies

Nature Microbiology(2020)10.1038/s41564-020-00789-5

N/A

0.986DataRank · unranked

716 citations

Adam K. Wheatley, Stephen J. Kent, Brandon J. DeKosky, Wen Shi Lee

The Molecular Mechanisms That Underlie the Immune Biology of Anti-drug Antibody Formation Following Treatment With Monoclonal Antibodies

Frontiers in Immunology(2020)10.3389/fimmu.2020.01951

N/A

0.845DataRank · unranked

278 citations

Matías Gutiérrez-González, Brandon J. DeKosky, Yariv Wine, Anna Vaisman‐Mentesh

Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site

Nature Communications(2023)10.1038/s41467-023-42098-5

N/A

0.613DataRank · unranked

25 citations

S. Pletnev, Adam S. Olia, Kai Xu, Baoshan Zhang, Reda Rawi +21 more

Functional Profiling of Antibody Immune Repertoires in Convalescent Zika Virus Disease Patients

Frontiers in Immunology(2021)10.3389/fimmu.2021.615102

N/A

0.483DataRank · unranked

24 citations

Morgan R. Timm, Bharat Madan, Katherine E. Burgomaster, Kimberly A. Dowd, Erica Normandin +16 more

A molecular trap against COVID-19

Science(2020)10.1126/science.abe0010

N/A

0.312DataRank · unranked

7 citations

Brandon J. DeKosky

Sequence-Signature Optimization Enables Improved Identification of Human HV6-1-Derived Class Antibodies That Neutralize Diverse Influenza A Viruses

Frontiers in Immunology(2021)10.3389/fimmu.2021.662909

N/A

0.292DataRank · unranked

6 citations

Chen‐Hsiang Shen, Crystal Sao‐Fong Cheung, Jason Gorman, Adrian Creanga, Michael Joyce +14 more

Clonal Variant Analysis of Antibody Engineering Libraries

Cold Spring Harbor Protocols(2024)10.1101/pdb.prot108626

N/A

0.208DataRank · unranked

3 citations

Matías Gutiérrez-González, Bharat Madan, Brandon J. DeKosky, Ahmed S. Fahad

Strategies to Screen Anti-AQP4 Antibodies from Yeast Surface Display Libraries

Antibodies(2022)10.3390/antib11020039

N/A

0.165DataRank · unranked

2 citations

Wei Jun Jin, Ahmed S. Fahad, Brooklyn K. Mussman, Grazia Paola Nicchia, Bharat Madan +7 more

Potent Monoclonal Antibodies Against Circulating Yellow Fever Virus Strains from Donors Immunized with the 17D Vaccine

American Journal of Tropical Medicine and Hygiene(2025)10.4269/ajtmh.25-0057

N/A

0.104DataRank · unranked

1 citations

Danielle R. D. Saunders, Andrew Miller, Ahmed S. Fahad, Morgan R. Timm, Yuliya Petrova +24 more

Clonal Lineage and Gene Diversity Analysis of Paired Antibody Heavy and Light Chains

Cold Spring Harbor Protocols(2024)10.1101/pdb.prot108628

N/A

0.104DataRank · unranked

1 citations

Matías Gutiérrez-González, Bharat Madan, Brandon J. DeKosky, Ahmed S. Fahad

Paired heavy- and light-chain signatures contribute to potent SARS-CoV-2 neutralization in public antibody responses

Cell Reports(2021)10.1016/j.celrep.2021.109771

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0DataRank · unranked

62 citations

Gabriele Cerutti, Ahmed S. Fahad, Chen‐Hsiang Shen, Matheus Oliveira de Souza, Phinikoula S. Katsamba +29 more

Mutational fitness landscapes reveal genetic and structural improvement pathways for a vaccine-elicited HIV-1 broadly neutralizing antibody

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2011653118

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0DataRank · unranked

31 citations

Baoshan Zhang, Kai Xu, Cara W. Chao, Sijy O’Dell, Jacy R. Wolfe +18 more

Regulatory Approved Monoclonal Antibodies Contain Framework Mutations Predicted From Human Antibody Repertoires

Frontiers in Immunology(2021)10.3389/fimmu.2021.728694

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0DataRank · unranked

19 citations

Sophia A. Ulmer, Emily R. Rhodes, Matías Gutiérrez-González, Brandon J. DeKosky, Kayla G. Sprenger +2 more

Immortalization and functional screening of natively paired human T cell receptor repertoires

Protein Engineering Design and Selection(2021)10.1093/protein/gzab034

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0DataRank · unranked

13 citations

Cheng-Yu Chung, Sheila N. López Acevedo, Nicoleen Boyle, Bharat Madan, Matías Gutiérrez-González +12 more

Optimized Production of Fc Fusion Proteins by Sortase Enzymatic Ligation

Industrial & Engineering Chemistry Research(2021)10.1021/acs.iecr.1c02842

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0DataRank · unranked

9 citations

Amy D. Laflin, Stephanie N. Johnson, Noora Batrash, J. Daniel Griffin, Cory Berkland +2 more

Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS‐CoV‐2

AIChE Journal(2021)10.1002/aic.17440

N/A

0DataRank · unranked

7 citations

Eswar R. Reddem, Pengfei Wang, Ryan G. Casner, Manoj S. Nair, Yaoxing Huang +16 more

Paired heavy and light chain signatures contribute to potent SARS-CoV-2 neutralization in public antibody responses

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2020.12.31.424987

N/A

0DataRank · unranked

26 citations

Gabriele Cerutti, Ahmed S. Fahad, Chen‐Hsiang Shen, Matheus Oliveira de Souza, Phinikoula S. Katsamba +29 more

Human antibody immune responses are personalized by selective removal of MHC-II peptide epitopes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.15.426750

N/A

0DataRank · unranked

5 citations

Ahmed S. Fahad, Matt Ardito, Padma P. Nanaware, Liying Lu, Erica Normandin +14 more

Immortalization and Functional Screening of Natively Paired Human T Cell Receptor Repertoires

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.19.465057

N/A

0DataRank · unranked

2 citations

C Y Chung, Sheila N. López Acevedo, Nicoleen Boyle, Bharat Madan, Matías Gutiérrez-González +11 more

Regulatory approved monoclonal antibodies contain framework mutations predicted from human antibody repertoires

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.22.449488

N/A

0DataRank · unranked

1 citations

Sophia A. Ulmer, Emily R. Rhodes, Matías Gutiérrez-González, Brandon J. DeKosky, Kayla G. Sprenger +2 more

Molecular probes of spike ectodomain and its subdomains for SARS-CoV-2 variants, Alpha through Omicron

PLoS ONE(2022)10.1371/journal.pone.0268767

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0DataRank · unranked

29 citations

Alexandra F. Nazzari, Misook Choe, Tracy Liu, Matheus Oliveira de Souza, Yuliya Petrova +16 more

Highly protective antimalarial antibodies via precision library generation and yeast display screening

The Journal of Experimental Medicine(2022)10.1084/jem.20220323

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0DataRank · unranked

22 citations

Prabhanshu Tripathi, Lais Da Silva Pereira, Jason Gorman, Thuy Duong Nguyen, Marlon Dillon +22 more

Mapping monoclonal anti-SARS-CoV-2 antibody repertoires against diverse coronavirus antigens

Frontiers in Immunology(2022)10.3389/fimmu.2022.977064

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0DataRank · unranked

7 citations

Bharat Madan, I‐Ting Teng, Aric Huang, Lihong Liu, Ahmed S. Fahad +10 more

Bioinformatic Analysis of Natively Paired VH:VL Antibody Repertoires for Antibody Discovery

Methods in molecular biology(2022)10.1007/978-1-0716-2609-2_25

N/A

0DataRank · unranked

4 citations

Bharat Madan, Brandon J. DeKosky, Ahmed S. Fahad

Quality Control: Chain Pairing Precision and Monitoring of Cross-Sample Contamination: A Method by the AIRR Community

Methods in molecular biology(2022)10.1007/978-1-0716-2115-8_21

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0DataRank · unranked

1 citations

Matías Gutiérrez-González, Sheila N. López Acevedo, Ahmed S. Fahad, Brandon J. DeKosky, on behalf of the AIRR Community +1 more

Cell activation-based screening of natively paired human T cell receptor repertoires

Scientific Reports(2023)10.1038/s41598-023-31858-4

N/A

0DataRank · unranked

9 citations

C Y Chung, Sheila N. López Acevedo, Nicoleen Boyle, Bharat Madan, Matías Gutiérrez-González +12 more

Optimized single-cell gates for yeast display screening

Protein Engineering Design and Selection(2024)10.1093/protein/gzae018

N/A

0DataRank · unranked

2 citations

Matheus Oliveira de Souza, Francisco M Figueiras, Aric Huang, Bailey B. Banach, Jacy R. Wolfe +4 more

Antibody Data Analysis from Diverse Immune Libraries

Cold Spring Harbor Protocols(2024)10.1101/pdb.prot108627

N/A

0DataRank · unranked

2 citations

Matías Gutiérrez-González, Bharat Madan, Brandon J. DeKosky, Ahmed S. Fahad

Beyond Single Clones: High-Throughput Sequencing in Antibody Discovery

Cold Spring Harbor Protocols(2024)10.1101/pdb.top107772

N/A

0DataRank · unranked

0 citations

Matías Gutiérrez-González, Bharat Madan, Brandon J. DeKosky, Ahmed S. Fahad

Anti-Malaria Antibody Engineering Broadens Recognition Motifs and Reveals New Homotypic Interactions that Enhance Protective Breadth

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.30.679367

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0DataRank · unranked

2 citations

Prabhanshu Tripathi, Yevel Flores-García, Bharat Madan, Gene A. Lee, Ahmed S. Fahad +13 more

High-Throughput Antibody Neutralization Screening in Massively Parallel Droplet Arrays

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.31.635965

N/A

0DataRank · unranked

1 citations

Ahmed S. Fahad, Cyrille L. Delley, Cheng-Yu Chung, Shuyan Jin, Nicoleen Boyle +16 more

Yeast Display Reveals Plentiful Mutations That Improve Fusion Peptide Vaccine-Elicited Antibodies Beyond 59% HIV-1 Neutralization Breadth

Vaccines(2025)10.3390/vaccines13111098

N/A

0DataRank · unranked

0 citations

S. Pletnev, Bharat Madan, Phinikoula S. Katsamba, Krisha McKee, Nicholas C. Morano +15 more

Control of antigen presentation on MHC-I by a bacterial secretion system

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.19.689332

N/A

0DataRank · unranked

0 citations

Rachel A. McGinn, Benjamin L. Allsup, Madison Leone, Penny Timms, Matías Gutiérrez-González +7 more

Structure-Based Design with Tag-Based Purification and In-Process Biotinylation Enable Streamlined Development of SARS-CoV-2 Spike Molecular Probes

Cell Reports(2020)10.1016/j.celrep.2020.108322

N/A

0DataRank · unranked

76 citations

I‐Ting Teng, Adam S. Olia, Gabriele Cerutti, Jason Gorman, Alexandra F. Nazzari +33 more

Linking autoantigen properties to mechanisms of immunity

Advanced Drug Delivery Reviews(2020)10.1016/j.addr.2020.04.005

N/A

0DataRank · unranked

10 citations

Jimmy Y. Song, Joshua O. Sestak, Brandon J. DeKosky, Cory Berkland, J. Daniel Griffin

Multimeric Insulin Desensitizes Insulin-Specific B Cells

ACS Applied Bio Materials(2020)10.1021/acsabm.0c00782

N/A

0DataRank · unranked

8 citations

J. Daniel Griffin, Chrys Hulbert, Brandon J. DeKosky, James W. Thomas, Cory Berkland +1 more

Antibody-guided structure-based vaccines

Seminars in Immunology(2020)10.1016/j.smim.2020.101428

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0DataRank · unranked

45 citations

Brandon J. DeKosky, Jeffrey B. Ulmer, Peter D. Kwong

VRC34-Antibody Lineage Development Reveals How a Required Rare Mutation Shapes the Maturation of a Broad HIV-Neutralizing Lineage

Cell Host & Microbe(2020)10.1016/j.chom.2020.01.027

N/A

0DataRank · unranked

32 citations

Brandon J. DeKosky, Yicheng Guo, Kai Xu, Ying Gu, Divya Kilam +31 more

The covalent SNAP tag for protein display quantification and low-pH protein engineering

Journal of Biotechnology(2020)10.1016/j.jbiotec.2020.06.011

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0DataRank · unranked

4 citations

Bharat Madan, Brooklyn K. Mussman, Amen T. Hailemariam, Ahmed S. Fahad, Jacy R. Wolfe +6 more

Tetrameric Fluorescent Antigen Arrays for Single-Step Identification of Antigen-Specific B Cells

Journal of Visualized Experiments(2020)10.3791/61827

N/A

0DataRank · unranked

2 citations

J. Daniel Griffin, Stephanie N. Johnson, Cory Berkland, Brandon J. DeKosky, Kyle D. Apley

Structure-Based Design with Tag-Based Purification and In-Process Biotinylation Enable Streamlined Development of SARS-CoV-2 Spike Molecular Probes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.22.166033

N/A

0DataRank · unranked

12 citations

I‐Ting Teng, Adam S. Olia, Gabriele Cerutti, Jason Gorman, Alexandra F. Nazzari +33 more

Vaccination with prefusion-stabilized respiratory syncytial virus fusion protein induces genetically and antigenically diverse antibody responses

Immunity(2021)10.1016/j.immuni.2021.03.004

N/A

0DataRank · unranked

70 citations

Daniel Wrapp, Chen‐Hsiang Shen, Morgan S. A. Gilman, Tracy J. Ruckwardt, Chaim A. Schramm +30 more