Judd F. Hultquist

Immunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 89 papers. Top paper: “Functional landscape of SARS-CoV-2 cellular restriction”.

Functional landscape of SARS-CoV-2 cellular restriction

Molecular Cell(2021)10.1016/j.molcel.2021.04.008

N/A

4.8DataRank · unranked

228 citations

Mary K. Lewinski, Lars Pache, Charlotte A. Stoneham, Xin Yin, Mark E. Becker +29 more

Restriction factor compendium for influenza A virus reveals a mechanism for evasion of autophagy

Nature Microbiology(2021)10.1038/s41564-021-00964-2

N/A

1.5DataRank · unranked

49 citations

Shashank Tripathi, Ariel Rodríguez-Frandsen, Lars Pache, María Teresa Sánchez-Aparicio, Michael McGregor +25 more

Proteomic and genetic analyses of influenza A viruses identify pan-viral host targets

Nature Communications(2023)10.1038/s41467-023-41442-z

N/A

1.2DataRank · unranked

62 citations

Michael McGregor, Mehdi Bouhaddou, Benjamin J. Polacco, Eun‐Young Kim, Thông Nguyen +50 more

A functional map of HIV-host interactions in primary human T cells

Nature Communications(2022)10.1038/s41467-022-29346-w

N/A

1.2DataRank · unranked

52 citations

Judd F. Hultquist, Michael McGregor, Mehdi Bouhaddou, Ryan T. Leenay, Lacy M. Simons +17 more

A clade of SARS-CoV-2 viruses associated with lower viral loads in patient upper airways

EBioMedicine(2020)10.1016/j.ebiom.2020.103112

N/A

0.689DataRank · unranked

98 citations

Hannah Nam, Scott C. Roberts, Lacy M. Simons, Lawrence J. Jennings, Chao Qi +6 more

A Unique Clade of SARS-CoV-2 Viruses is Associated with Lower Viral Loads in Patient Upper Airways

medRxiv(2020)10.1101/2020.05.19.20107144

N/A

0.646DataRank · unranked

73 citations

Hannah Nam, Scott C. Roberts, Lacy M. Simons, Lawrence J. Jennings, Chao Qi +6 more

Efficient generation of isogenic primary human myeloid cells using CRISPR-Cas9 ribonucleoproteins

Cell Reports(2021)10.1016/j.celrep.2021.109105

N/A

0.596DataRank · unranked

52 citations

Devin A. Cavero, Michael McGregor, Weihao Zheng, Jonathan M. Budzik, Theodore L. Roth +19 more

Multiple expansions of globally uncommon SARS-CoV-2 lineages in Nigeria

Nature Communications(2022)10.1038/s41467-022-28317-5

N/A

0.593DataRank · unranked

51 citations

Lacy M. Simons, O. M. Adewumi, Adeola Fowotade, Ewean Chukwuma Omoruyi, Johnson Adekunle Adeniji +15 more

Recognition of HIV-1 capsid by PQBP1 licenses an innate immune sensing of nascent HIV-1 DNA

Molecular Cell(2022)10.1016/j.molcel.2022.06.010

N/A

0.584DataRank · unranked

48 citations

João I. Mamede, Derrick Lau, Narae Ahn, María Teresa Sánchez-Aparicio, Joshua Temple +16 more

Africa-specific human genetic variation near CHD1L associates with HIV-1 load

Nature(2023)10.1038/s41586-023-06370-4

N/A

0.500DataRank · unranked

27 citations

Immacolata Porreca, Gennaro Iaconis, Hoi Ping Mok, Subhankar Mukhopadhyay, Emre Karakoç +66 more

Efficient Generation of Isogenic Primary Human Myeloid Cells using CRISPR-Cas9 Ribonucleoproteins

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.13.991414

N/A

0.498DataRank · unranked

7 citations

Devin A. Cavero, Michael McGregor, David E. Gordon, Weihao Zheng, Jonathan M. Budzik +14 more

CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells

mBio(2024)10.1128/mbio.02222-23

N/A

0.351DataRank · unranked

8 citations

Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M. Haas, Mehdi Bouhaddou +16 more

Rapid and Sensitive Detection of Antigen from SARS-CoV-2 Variants of Concern by a Multivalent Minibinder-Functionalized Nanomechanical Sensor

Analytical Chemistry(2022)10.1021/acs.analchem.2c01221

N/A

0.345DataRank · unranked

9 citations

Andrew C. Hunt, Gajendra S. Shekhawat, Lauren Carter, Sidney Chan, Kejia Wu +9 more

Leveraging biotin-based proximity labeling to identify cellular factors governing early alphaherpesvirus infection

mBio(2024)10.1128/mbio.01445-24

N/A

0.330DataRank · unranked

8 citations

Qing Fan, Lacy M. Simons, Samuel N. Smukowski, Caitlin Pegg, Richard Longnecker +4 more

Targeting Interactions Between Siglec-10 and α3β1 Integrin Enhances Macrophage-Mediated Phagocytosis of Pancreatic Cancer

Cancer Research(2025)10.1158/0008-5472.can-25-0977

N/A

0.330DataRank · unranked

8 citations

Gauri Mirji, Sidra Islam, Lacy M. Simons, Smita Bhat, Amanda Pires Bonfanti +10 more

Cord blood proteomics identifies biomarkers of early-onset neonatal sepsis

JCI Insight(2025)10.1172/jci.insight.193826

N/A

0.304DataRank · unranked

6 citations

Mark E. Becker, Ted Ling-Hu, Young Ah Goo, Sebastián Otero, Aspen N Kremer +10 more

CACHE Challenge #2: Targeting the RNA Site of the SARS-CoV-2 Helicase Nsp13

Journal of Chemical Information and Modeling(2025)10.1021/acs.jcim.5c00535

N/A

0.292DataRank · unranked

6 citations

Madhushika Silva, Ayaz Ahmad, Oscar E. A. Arce, Roly J. Armstrong, Cheryl Arrowsmith +105 more

Bioengineering multifunctional extracellular vesicles for targeted delivery of biologics to T cells

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.14.491879

N/A

0.292DataRank · unranked

6 citations

Lacy M. Simons, Katherine E. Berman, Luyi Cheng, Julius B. Lucks, Judd F. Hultquist +2 more

Host ZCCHC3 blocks HIV-1 infection and production through a dual mechanism

iScience(2024)10.1016/j.isci.2024.109107

N/A

0.292DataRank · unranked

6 citations

Yuri Tanaka, Daphne Cornish, Hidetaka Kosako, Erika P. Butlertanaka, Prabuddha Sengupta +5 more

Transitions in lung microbiota landscape associate with distinct patterns of pneumonia progression

Cell Host & Microbe(2025)10.1016/j.chom.2025.11.011

N/A

0.269DataRank · unranked

5 citations

Stefanie Huttelmaier, Chiagozie I. Pickens, Anahid A. Moghadam, Hiam Abdala‐Valencia, Jiaxian Shen +95 more

Integrative multi-omics analysis in vivo identifies influenza virus host factors

iScience(2025)10.1016/j.isci.2025.113644

N/A

0.208DataRank · unranked

3 citations

Benjamin J. Polacco, Manon Eckhardt, Max W. Chang, Carles Martínez‐Romero, Kayla Adkins-Travis +29 more

Targeting Siglec-10/α3β1 Integrin Interactions Enhances Macrophage-Mediated Phagocytosis of Pancreatic Cancer

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.06.652455

N/A

0.208DataRank · unranked

3 citations

Gauri Mirji, S M Shamsul Islam, Lacy M. Simons, Sajad Ahmad Bhat, Amanda P. Bonfanti +10 more

CACHE Challenge #2: Targeting the RNA Site of the SARS-CoV-2 Helicase Nsp13

ChemRxiv(2025)10.26434/chemrxiv-2025-8f0rq-v3

N/A

0.165DataRank · unranked

2 citations

Madhushika Silva, Abd Al‐Aziz A. Abu‐Saleh, Ayaz Ahmad, Jesus Antonio Alvarado-Huayhuaz, Oscar E. A. Arce +104 more

CACHE Challenge #2: Targeting the RNA Site of the SARS-CoV-2 Helicase Nsp13

ChemRxiv(2025)10.26434/chemrxiv-2025-8f0rq

N/A

0.150DataRank · unranked

1 citations

Madhushika Silva, Abd Al‐Aziz A. Abu‐Saleh, Ayaz Ahmad, Jesus Antonio Alvarado-Huayhuaz, Oscar E. A. Arce +104 more

Release of P-TEFb from the Super Elongation Complex promotes HIV-1 latency reversal

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.01.582881

N/A

0.125DataRank · unranked

1 citations

Miriam Walter, Shimaa Soliman, Lacy M. Simons, Daphne Cornish, Ariel W T Halle +5 more

Scheffersomyces spartinae Fungemia among Pediatric Patients, Pakistan, 2020–2024

Emerging infectious diseases(2025)10.3201/eid3108.241604

N/A

0.104DataRank · unranked

1 citations

Joveria Farooqi, Lacy M. Simons, Judd F. Hultquist, Ramón Lorenzo-Redondo, Charlesnika T. Evans +15 more

Intra-Host Evolution of SARS-CoV-2 During Persistent Infection of Pediatric COVID-19 Patients

Viruses(2025)10.3390/v17101313

N/A

0.104DataRank · unranked

1 citations

Tien Doan, Estefany Rios-Guzman, Jessica Maciuch, Lacy M. Simons, Dulce S. Garcia +6 more

COVID-19 outbreak and genomic investigation in an inpatient behavioral health unit

Antimicrobial Stewardship & Healthcare Epidemiology(2024)10.1017/ash.2024.40

N/A

0.104DataRank · unranked

1 citations

Alina G. Stancovici, Lacy M. Simons, Grace Barajas, K. Glenn, Rachel Palmieri Weber +5 more

An immunoPET probe to SARS-CoV-2 reveals early infection of the male genital tract in rhesus macaques

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.25.481974

N/A

0DataRank · unranked

7 citations

Yanique Thomas, Robert V. Blair, Sadia Samer, Mark Doyle, Cecily C. Midkiff +13 more

Contribution of 6mer seed toxicity to HIV-1 induced cytopathicity

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.01.510471

N/A

0DataRank · unranked

3 citations

Harry E. Taylor, Thomas J. Hope, Richard T. D’Aquila, Elizabeth T. Bartom, Judd F. Hultquist +2 more

Rab11-FIP1C is dispensable for HIV-1 replication in primary CD4 + T cells but its role is cell-type-dependent in immortalized human T-cell lines

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.03.494784

N/A

0DataRank · unranked

0 citations

Huxley K. Hoffman, Hannah Carter, Lacy M. Simons, Lwar Naing, Sherimay D. Ablan +4 more

ViralVar: A Web Tool for Multilevel Visualization of SARS-CoV-2 Genomes

Preprints.org(2022)10.20944/preprints202210.0241.v1

N/A

0DataRank · unranked

0 citations

Lukasz Jaroszewski, Adam Godzik, Arash Iranzadeh, Lacy M. Simons, Taylor Joseph Dean +4 more

Genetically encoding multiple functionalities into extracellular vesicles for the targeted delivery of biologics to T cells

Nature Biomedical Engineering(2023)10.1038/s41551-023-01142-x

N/A

0DataRank · unranked

76 citations

Lacy M. Simons, Katherine E. Berman, Luyi Cheng, Beth N. DiBiase, Michelle Hung +4 more

Large library docking for novel SARS‐CoV ‐2 main protease non‐covalent and covalent inhibitors

Protein Science(2023)10.1002/pro.4712

N/A

0DataRank · unranked

43 citations

Conner Bardine, Stefan Gahbauer, Isha Singh, Tyler C. Detomasi, Kris M. White +26 more

Enhancing HIV-1 latency reversal through regulating the elongating RNA Pol II pause-release by a small-molecule disruptor of PAF1C

Science Advances(2023)10.1126/sciadv.adf2468

N/A

0DataRank · unranked

21 citations

William J. Cisneros, Marta Iwanaszko, Yuki Aoi, Sheetal Ganesan, Miriam Walter +7 more

SARS-CoV-2 genomics and impact on clinical care for COVID-19

Journal of Antimicrobial Chemotherapy(2023)10.1093/jac/dkad309

N/A

0DataRank · unranked

12 citations

Alexandre Machado de Sant’Anna Carvalho, Judd F. Hultquist, Egon A. Ozer, Ramón Lorenzo-Redondo

Serodominant SARS-CoV-2 Nucleocapsid Peptides Map to Unstructured Protein Regions

Microbiology Spectrum(2023)10.1128/spectrum.00324-23

N/A

0DataRank · unranked

14 citations

Nicole L. Inniss, Ted Ling-Hu, G. Minasov, G. Wiersum, Mónica Rosas‐Lemus +6 more

Analysis of the Contribution of 6-mer Seed Toxicity to HIV-1-Induced Cytopathicity

Journal of Virology(2023)10.1128/jvi.00652-23

N/A

0DataRank · unranked

9 citations

Harry E. Taylor, Thomas J. Hope, Richard T. D’Aquila, Elizabeth T. Bartom, Judd F. Hultquist +2 more

Resurgence of SARS-CoV-2 Delta after Omicron variant superinfection in an immunocompromised pediatric patient

Virology Journal(2023)10.1186/s12985-023-02186-w

N/A

0DataRank · unranked

3 citations

Lacy M. Simons, Maria Francesca Reyes Agnes, Taylor Heald‐Sargent, William J. Muller, Larry K. Kociolek +4 more

Altered RSV Epidemiology and Genetic Diversity Following the COVID-19 Pandemic

Research Square(2023)10.21203/rs.3.rs-3712859/v1

N/A

0DataRank · unranked

5 citations

Estefany Rios-Guzman, Lacy M. Simons, Taylor J. Dean, Francesca Agnes, Anna Pawlowski +6 more

Quantity of SARS-CoV-2 RNA copies exhaled per minute during natural breathing over the course of COVID-19 infection

medRxiv(2023)10.1101/2023.09.06.23295138

N/A

0DataRank · unranked

4 citations

Guangyu Zhou, Judd F. Hultquist, Lacy M. Simons, Ramon Lorenzo- Redondo, Egon A. Ozer +16 more

SARS-CoV-2 Bottlenecks and Tissue-Specific Adaptation in the Central Nervous System

Research Square(2023)10.21203/rs.3.rs-3220157/v1

N/A

0DataRank · unranked

2 citations

Jacob Class, Lacy M. Simons, Ramón Lorenzo-Redondo, Laura Cooper, Tanushree Dangi +5 more

Live imaging of the airway epithelium reveals that mucociliary clearance modulates SARS-CoV-2 spread

Research Square(2023)10.21203/rs.3.rs-3246773/v1

N/A

0DataRank · unranked

0 citations

Mark E. Becker, Laura Martin‐Sancho, Lacy M. Simons, Michael D. McRaven, Sumit K. Chanda +2 more

Deviations in RSV epidemiological patterns and population structures in the United States following the COVID-19 pandemic

Nature Communications(2024)10.1038/s41467-024-47757-9

N/A

0DataRank · unranked

88 citations

Lacy M. Simons, Taylor J. Dean, Francesca Agnes, Anna Pawlowski, Arghavan Alisoltani +6 more

Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia

Nature Immunology(2024)10.1038/s41590-024-01914-w

N/A

0DataRank · unranked

17 citations

Ziyou Ren, Karolina J. Senkow, Rogan A. Grant, Catherine A. Gao, Elizabeth S. Malsin +91 more

Activity and inhibition of the SARS-CoV-2 Omicron nsp13 R392C variant using RNA duplex unwinding assays

SLAS DISCOVERY(2024)10.1016/j.slasd.2024.01.006

N/A

0DataRank · unranked

9 citations

Margarita Rzhetskaya, Ted Ling-Hu, Ramón Lorenzo-Redondo, Kelly E. R. Bachta, Karla J. F. Satchell +2 more

Genomic characterization of SARS-CoV-2 in Guinea, West Africa

PLoS ONE(2024)10.1371/journal.pone.0299082

N/A

0DataRank · unranked

8 citations

Josué Togo, Lacy M. Simons, Souleymane Diallo, Mohamed Lamine Magassouba, Mamadou Keita +9 more

Release of P-TEFb from the Super Elongation Complex promotes HIV-1 latency reversal

PLoS Pathogens(2024)10.1371/journal.ppat.1012083

N/A

0DataRank · unranked

5 citations

Shimaa Soliman, Miriam Walter, Lacy M. Simons, Daphne Cornish, Simone De Fabritiis +7 more

Integration of individualized and population-level molecular epidemiology data to model COVID-19 outcomes

Cell Reports Medicine(2024)10.1016/j.xcrm.2023.101361

N/A

0DataRank · unranked

2 citations

Lacy M. Simons, Taylor J. Dean, Estefany Rios-Guzman, Matthew Caputo, Arghavan Alisoltani +12 more

Quantity of SARS-CoV-2 RNA copies exhaled per minute during natural breathing over the course of COVID-19 infection

(2024)10.7554/elife.91686

N/A

0DataRank · unranked

0 citations

Guangyu Zhou, Judd F. Hultquist, Lacy M. Simons, Ramon Lorenzo- Redondo, Egon A. Ozer +16 more

Author Response: Quantity of SARS-CoV-2 RNA copies exhaled per minute during natural breathing over the course of COVID-19 infection

(2024)10.7554/elife.91686.1.sa3

N/A

0DataRank · unranked

0 citations

Guangyu Zhou, Judd F. Hultquist, Lacy M. Simons, Ramon Lorenzo- Redondo, Egon A. Ozer +16 more

Quantity of SARS-CoV-2 RNA copies exhaled per minute during natural breathing over the course of COVID-19 infection

(2024)10.7554/elife.91686.1

N/A

0DataRank · unranked

0 citations

Guangyu Zhou, Judd F. Hultquist, Lacy M. Simons, Ramon Lorenzo- Redondo, Egon A. Ozer +16 more

Evolution of the Umbilical Cord Blood Proteome Across Gestational Development

medRxiv(2024)10.1101/2024.06.21.24309280

N/A

0DataRank · unranked

0 citations

Nicola Lancki, Ted Ling-Hu, Young Ah Goo, Sebastián Otero, Nathaniel J. Rhodes +7 more

Ribosome customization and functional diversification among P-stalk proteins regulate late poxvirus protein synthesis

Cell Reports(2025)10.1016/j.celrep.2024.115119

N/A

0DataRank · unranked

6 citations

Daphne Cornish, Aaron J Ferrell, Jeffrey N. Savas, Peter Shen, Judd F. Hultquist +2 more

Evolution of the umbilical cord blood proteome across gestational development

Scientific Reports(2025)10.1038/s41598-024-84446-5

N/A

0DataRank · unranked

5 citations

Nicola Lancki, Ted Ling-Hu, Young Ah Goo, Sebastián Otero, Nathaniel J. Rhodes +7 more

The ability of SAMHD1-deficient monocytes to trigger the Type I IFN response depends on cGAS and mitochondrial DNA

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110430

N/A

0DataRank · unranked

5 citations

Isabelle K. Vila, Charlotte Luchsinger, Cinzia Bertelli, Moritz Schüssler, Clara Taffoni +13 more

Nanomechanical systems for the rapid detection of HIV-1 p24 antigen

Biosensors and Bioelectronics(2025)10.1016/j.bios.2025.117395

N/A

0DataRank · unranked

4 citations

Daphne Cornish, Lacy M. Simons, Dilip Agarwal, Gajendra S. Shekhawat, Judd F. Hultquist +2 more

The impact of remdesivir on SARS-CoV-2 evolution in vivo

JCI Insight(2025)10.1172/jci.insight.182376

N/A

0DataRank · unranked

6 citations

Lacy M. Simons, Estefany Rios-Guzman, Alexandre Machado de Sant’Anna Carvalho, Maria Francesca Reyes Agnes, Arghavan Alisoltani +4 more

CPSF6 promotes HIV-1 preintegration complex function

Journal of Virology(2025)10.1128/jvi.00490-25

N/A

0DataRank · unranked

4 citations

Sooin Jang, Rajasree Chakraborty, Rajalingam Radhakrishnan, Bjarki Arnarson, Prem Prakash +11 more

Large language models accurately identify immunosuppression in intensive care unit patients

Journal of the American Medical Informatics Association(2025)10.1093/jamia/ocaf141

N/A

0DataRank · unranked

1 citations

Mengjia Kang, M. Bak, Steven Tran, Anna Pawlowski, Prasanth Nannapaneni +87 more

Impact of N 6 -methyladenosine (m 6 A) machinery on HIV-1 replication in primary CD4+ T cells

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.07.686373

N/A

0DataRank · unranked

1 citations

Lacy M. Simons, Siyu Huang, Thea Joseph, Aubrey M. Sawyer, Li Wu +2 more

CPSF6 Promotes HIV-1 Preintegration Complex Function

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.28.635394

N/A

0DataRank · unranked

0 citations

Sooin Jang, Rajasree Chakraborty, Rajalingam Radhakrishnan, Bjarki Arnarson, Prem Prakash +11 more

Cyclophilin A Prevents HIV-1 Restriction in Lymphocytes by Blocking Human TRIM5α Binding to the Viral Core

Cell Reports(2020)10.1016/j.celrep.2020.02.100

N/A

0DataRank · unranked

101 citations

Mirjana Persaud, Lacy M. Simons, Ángel Bulnes‐Ramos, Cindy Buffone, Alicia Martínez‐López +8 more

mRNA display with library of even-distribution reveals cellular interactors of influenza virus NS1

Nature Communications(2020)10.1038/s41467-020-16140-9

N/A

0DataRank · unranked

20 citations

Judd F. Hultquist, Quan Zhou, Anders Olson, Yenwen Tseng, Tian-hao Zhang +14 more

Patterns and persistence of SARS-CoV-2 IgG antibodies in Chicago to monitor COVID-19 exposure

medRxiv(2020)10.1101/2020.11.17.20233452

N/A

0DataRank · unranked

23 citations

Thomas W. McDade, Lorenzo L. Pesce, Lauren A. Vaught, Nina L. Reiser, Elena Bogdanovic +12 more

TRIM5α restriction of HIV-1-N74D viruses in lymphocytes is caused by a loss of cyclophilin A protection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.29.318121

N/A

0DataRank · unranked

1 citations

Lacy M. Simons, Ángel Bulnes‐Ramos, Judd F. Hultquist, Felipe Diaz‐Griffero, Anastasia Selyutina

MDA5 Governs the Innate Immune Response to SARS-CoV-2 in Lung Epithelial Cells

Cell Reports(2021)10.1016/j.celrep.2020.108628

N/A

0DataRank · unranked

414 citations

Laura Riva, Yuan Pu, Laura Martin‐Sancho, Jun Kanamune, Yuki Yamamoto +11 more

GS-CA1 and lenacapavir stabilize the HIV-1 core and modulate the core interaction with cellular factors

iScience(2021)10.1016/j.isci.2021.103593

N/A

0DataRank · unranked

54 citations

Pan Hu, Sorin O. Miller, Lacy M. Simons, Hyun Jae Yu, Judd F. Hultquist +4 more

Patterns and persistence of SARS-CoV-2 IgG antibodies in Chicago to monitor COVID-19 exposure

JCI Insight(2021)10.1172/jci.insight.146148

N/A

0DataRank · unranked

34 citations

Thomas W. McDade, Lorenzo L. Pesce, Lauren A. Vaught, Nina L. Reiser, Elena Bogdanovic +12 more

HIV-1 Nef interacts with the cyclin K/CDK13 complex to antagonize SERINC5 for optimal viral infectivity

Cell Reports(2021)10.1016/j.celrep.2021.109514

N/A

0DataRank · unranked

15 citations

Sunan Li, Morgan K. Collins, Rongrong Li, Iqbal Ahmad, Silas F. Johnson +9 more

Longitudinal analysis of SARS-CoV-2 vaccine breakthrough infections reveal limited infectious virus shedding and restricted tissue distribution

medRxiv(2021)10.1101/2021.08.30.21262701

N/A

0DataRank · unranked

38 citations

Pamela P. Martinez, Rebecca L. Smith, Laura Gibson, Chad J. Achenbach, Sally M. McFall +38 more

Coincident rapid expansion of two SARS-CoV-2 lineages with enhanced infectivity in Nigeria

medRxiv(2021)10.1101/2021.04.09.21255206

N/A

0DataRank · unranked

37 citations

Lacy M. Simons, O. M. Adewumi, Adeola Fowotade, Ewean Chukwuma Omoruyi, Johnson Adekunle Adeniji +11 more

Severity of Illness Caused by Severe Acute Respiratory Syndrome Coronavirus 2 Variants of Concern in Children: A Single-Center Retrospective Cohort Study

medRxiv(2021)10.1101/2021.10.23.21265402

N/A

0DataRank · unranked

14 citations

Ramón Lorenzo-Redondo, Megan E. Reyna, Lacy M. Simons, Judd F. Hultquist, Ami B. Patel +10 more

HIV-1 Nef and CycK:CDK13 antagonize SERINC5 for optimal viral infectivity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.24.445478

N/A

0DataRank · unranked

0 citations

Sunan Li, Morgan K. Collins, Rongrong Li, Iqbal Ahmad, Silas F. Johnson +9 more

ICER controls HIV-1 infection and replication in elite controllers

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.30.450567

N/A

0DataRank · unranked

0 citations

Min Li, Tai-Wei Li, Zongyang Lv, Zhiwei Ye, William J. Cisneros +7 more

Assessment and Modeling of COVID-19 Outcomes in a Longitudinal Cohort of Hospitalized Adults

medRxiv(2021)10.1101/2021.07.02.21259665

N/A

0DataRank · unranked

0 citations

Ramón Lorenzo-Redondo, Meg Gibson, Sarah L. Kinch, Jacob P. Vandervaart, Nina L. Reiser +13 more

Longitudinal Analysis of SARS-CoV-2 Vaccine Breakthrough Infections Reveals Limited Infectious Virus Shedding and Restricted Tissue Distribution

Open Forum Infectious Diseases(2022)10.1093/ofid/ofac192

N/A

0DataRank · unranked

65 citations

Pamela P. Martinez, Rebecca L. Smith, Laura Gibson, Chad J. Achenbach, Sally M. McFall +38 more

Challenges and Opportunities for Global Genomic Surveillance Strategies in the COVID-19 Era

Viruses(2022)10.3390/v14112532

N/A

0DataRank · unranked

52 citations

Estefany Rios-Guzman, Ramón Lorenzo-Redondo, Egon A. Ozer, Judd F. Hultquist, Ted Ling-Hu

Blockade of TGF-β signaling reactivates HIV-1/SIV reservoirs and immune responses in vivo

JCI Insight(2022)10.1172/jci.insight.162290

N/A

0DataRank · unranked

26 citations

Yanique Thomas, Mariluz Araínga, Crystal Carter, Lisa Shirreff, Muhammad Arif +20 more

Global post-translational modification profiling of HIV-1-infected cells reveals mechanisms of host cellular pathway remodeling

Cell Reports(2022)10.1016/j.celrep.2022.110690

N/A

0DataRank · unranked

32 citations

David C. Crosby, Judd F. Hultquist, Andrew P. Kurland, Prithy Adhikary, Donna Li +16 more

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Journal of the Pediatric Infectious Diseases Society(2022)10.1093/jpids/piac068

N/A

0DataRank · unranked

26 citations

Ramón Lorenzo-Redondo, Megan E. Reyna, Lacy M. Simons, Judd F. Hultquist, Ami B. Patel +10 more

Serological Markers of SARS-CoV-2 Reinfection

mBio(2022)10.1128/mbio.02141-21

N/A

0DataRank · unranked

16 citations

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TRIM5α Restriction of HIV-1-N74D Viruses in Lymphocytes Is Caused by a Loss of Cyclophilin A Protection

Viruses(2022)10.3390/v14020363

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0DataRank · unranked

16 citations

Lacy M. Simons, Karen A. Kirby, Ángel Bulnes‐Ramos, Pan Hu, Stefan G. Sarafianos +3 more

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Open Forum Infectious Diseases(2022)10.1093/ofid/ofac027

N/A

0DataRank · unranked

12 citations

Ramón Lorenzo-Redondo, Meg Gibson, Sarah L. Kinch, Jacob P. Vandervaart, Nina L. Reiser +13 more

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Pathogens(2022)10.3390/pathogens11080891

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0DataRank · unranked

11 citations

Daphne Cornish, Judd F. Hultquist, William J. Cisneros

Rab11-FIP1C Is Dispensable for HIV-1 Replication in Primary CD4+T Cells, but Its Role Is Cell Type Dependent in Immortalized Human T-Cell Lines

Journal of Virology(2022)10.1128/jvi.00876-22

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0DataRank · unranked

6 citations

Huxley K. Hoffman, Hannah M. Carter, Lacy M. Simons, Lwar Naing, Sherimay D. Ablan +5 more

ViralVar: A Web Tool for Multilevel Visualization of SARS-CoV-2 Genomes

Viruses(2022)10.3390/v14122714

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0DataRank · unranked

6 citations

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Differential Expression of CREM/ICER Isoforms Is Associated with the Spontaneous Control of HIV Infection

mBio(2022)10.1128/mbio.01979-21

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0DataRank · unranked

5 citations

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Research Square(2022)10.21203/rs.3.rs-1479315/v1

N/A

0DataRank · unranked

11 citations

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